Syngnathus scovelli (Gulf pipefish): 125983919
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Entry
125983919 CDS
T08785
Symbol
med12
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12 isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125983919 (med12)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125983919 (med12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
125983919
NCBI-ProteinID:
XP_049601630
LinkDB
All DBs
Position
1:9662104..9694722
Genome browser
AA seq
2233 aa
AA seq
DB search
MMAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLHYNTFPDTGKRKPQVNQKDNFWLVTARSQSSVNNWFTD
LAGTKPLTQLAKKVPIFSKKEEVFGYLAKYLVPVMRSAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQYPSQGCSSPLPATPTDVEMATKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECFEKVRPGEDELLRLLLPLLLQYSGEFVQSAYLSRRLAYF
CTRRLNLLLSDGSLGPGAGGGHPTHSILTPQGNALPPTPTTQPAGGNQPQTPFTDFYICP
QHRPLVFGLSCMLQSIVLCCPSALVWHYSLTDSRNKTGSPLDLLPIAPSSLPMPGGNTAF
TQQVRVKLREIEEQVKERGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDF
NNSLDSLYNRIFGSGQSKDGHEMSPDDDAVVTLLCEWAVCCKRSGRHRAMVVAKLLEKRQ
AEIEAERCGESEVVDEKGSVSSGSLSAATLPVFQDVLLQFLDTQAPTLTEPGNENERVEF
SNLVLLFCELIRHDVFSHNIYMCTLISRGDLSSDGHLPRPRSPSDEPSDESDRKEQDAGG
SIKMEDTALSESMEIDHNSSANFDEMFSPPMHCESKGSPSPEKSAPEHDGKNTCKDKCMD
PAFPQLYDQPRHIQYATHFPIPQEENASHECNQRLVVLYGVGKLRDEARHTIKKITKDIL
KVLNRKSTAETGGEEGQKRKRSKPEAFPTAEDIFSKFQHLSHFDQHQVTSQVSRNVLEQI
TSFALGMSYHLPLVQHIQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSSLVG
SYTTSLCLCIVAVLRRYHSCLILNPEQTAQVFDGLRIVVKSGVNPADCCSAERCILAYLY
DLYTSCSHLKNKFGEIFSEFCSKVKNSIYCNIDPSDSNMLWDPVFMMEAIANPSAHNFNH
SMVGKILNDSPANRYSFVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWLGIL
KALCCSSNNGNCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLL
NAACSEQDSEPGARLTCRILLHLFKTPQRNPVPQDGIKSDKSSVGIRSSCDRHLLAASQN
SIVVGAVFAVLKAVFMLGDAELRGSGLSHSAGLDDLSEGRNVSIETASLDVYAKYVLKTI
CQQEWVGERCLKSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSDDGDNPQRQRIKR
ILQNMDQWTMRQSSLELQLMIKQSTNNELYSLLENIAKATIEVFQKSAELNSNNPSGNGA
VLQSGSASNSSSTTSKIKPILSSSERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQH
LGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVTNWRE
DQYQDDCKAKQMMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDMQSNN
ELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSESLEKVR
QLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFEKEGLQVSTKQKISPWDVFEGLKHSAPL
SWGWFGTVRMDRKVTKFEEQQRFLLYHTHLKPKPRSYYLEPLPLPPEEEEPLTPISQEPE
KKMLEAVKPEKSVPSVPSDSNKKKSNKKKKTPSAKTEDYVNRTPGVSYGTNMPPELMQNP
YSRLPYGQQSMGMYTQNQPLPPGGPGLDPPYRPARNPQMNKMMTTRPSYPGMMPTMQGNM
PGIMGMEKPYQMVYKPQPNMQQNQMLRHQLQVRLVSQAPLTGQTAPHQNHSMIGQQIRQM
APNQPYSSMQPSQNLSQGYTSYGSHMGMQPHPSQGGAIVPSSFGNQNFQGAHPGANPAVV
DPLRQMQQRPSGYVHQQAPGYAHNMQNAQRFAHQPIQQNPIMHGLSHMGGQGGPPGMRPN
QILTEQQQQQQQQQQQQQQQQQQQQQQQQQQQAAAQQQQQQYLRQQALRQQQAQQVHQQQ
QQQQQQQQQQQQVQSQQVPPQQQVPPQQQVPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQVSGVPPPGQQQNQGLGMQPLPPQQPMVRPSTFPRQGMQQTQQQQQTAALVRQLQQQL
SNTQPGQSTNSYY
NT seq
6702 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgccttcggaatcctcagctatgaacaccggccgttaaagcggccccggctc
gggcctccggacgtttatccacaagatccgaagcagaaggaggatgagctgactgcattg
aatgtgaaacaaggattcaacaaccagccagctgtgtctggtgatgaacatgggagtgcc
aaaaatgttaacttcaacccctccaagatcagttccaacttcagcagcatcatcgctgag
aagctacactacaacacttttcccgacacgggcaagcgtaagccgcaggtcaaccagaag
gataatttctggctggtcacagccaggtcacagagctccgtcaataactggttcacggat
ttagcaggcacaaagccactcacacaactggccaaaaaggtgccaatttttagtaagaag
gaggaggttttcggatatttggctaaatacttggtccccgtcatgcgctcagcgtggatg
atcaagatgacatgcgcttatcatgcagccatcacagagacgaaagtcaagaagaggcac
gtgattgatccttgtattgaatggacccagattatcacaaagtacttgtgggagcaactc
caaaaggtggccgagttctaccgacagtaccccagtcaaggctgcagctcgccgctccca
gccacacccactgacgtggagatggccaccaagcaatgggagtacaacgagaaactggca
atgttcatgtttcaggacggaatgctggacaggcatgagttcctgacgtgggtgctggag
tgtttcgagaaggtccgacccggtgaggatgagctcctgagactcctcttgccactttta
ctacagtactcgggggaattcgttcagtcggcttacttgtcacgcaggctggcttacttc
tgcacgcgacgcctcaacctgttgctaagcgacggcagtttggggcctggcgcaggcggc
gggcacccgacacacagcattttgacgccacagggaaatgcccttcccccgacaccgact
acccaaccagctggagggaaccagccccagacgcccttcacagacttctatatctgcccc
cagcaccggcctttggtgtttggcctcagctgcatgttgcagagcatagtattgtgttgc
cccagtgcactggtatggcattactctctcacagacagcagaaacaagactggctcccct
ctggacctcctccccattgccccctccagcttaccaatgccagggggaaacactgctttc
acacaacaggtccgtgtaaagctaagagagattgaggagcaagttaaggagcgaggccag
gcggtggagtttcgctggtcgtttgacaagtgccaggagaccacggcagggttcaccatc
gggagggtgctacacaccctggaggttttggacaatcacagctttgaaaagtccgacttt
aacaactcgctggattccttgtacaaccgaatatttggctcaggccagagcaaggatggc
catgagatgtcgccggacgacgacgcggtggtgaccctgctttgtgaatgggccgtttgt
tgtaagcggtcaggtagacacagagctatggtggtggccaagctgcttgagaaacgacag
gctgaaatagaagcggagcgatgcggcgagtctgaggtggtggatgagaagggctcagtg
tcgtcgggttccctttccgccgccacgcttccagtctttcaggatgttctgcttcagttc
ctggatactcaagcccccacactcacggaacccggcaacgagaatgagcgagtagagttc
tccaacctagtgctgctcttctgcgagctcatccgccacgacgtcttctcgcacaacatc
tacatgtgcacactcatctcccgtggcgacctatcctccgatggccacttaccacgcccg
cgctctccaagtgacgagccctcagatgagtctgatcgcaaggagcaggacgcgggtggc
agcattaagatggaggacaccgccctgtcggagtctatggaaatcgaccacaactcgagt
gccaattttgatgagatgttctctcctccaatgcactgcgagtccaagggcagcccctcc
ccagagaaatcagcacctgagcatgatggcaaaaacacctgtaaggacaagtgcatggac
cctgccttcccccaactatacgaccagccccgacacattcagtacgccacccactttccc
attcctcaggaggagaatgccagccacgagtgcaaccagcggcttgtggtcctctatggc
gtgggcaaactgcgggacgaggcccgacacaccatcaagaagataaccaaagatatcttg
aaggtgctcaaccgcaaaagcactgcagaaacagggggtgaggagggacaaaaacgaaaa
aggagtaagccagaggcctttcccaccgcagaagatatattttccaagttccagcacctc
tcccactttgaccagcaccaggtcacctcgcaggtgtcccgaaatgtgctggaacagatc
accagctttgccttaggaatgtcttatcacttgcctctcgtgcagcacattcagttcatc
ttcgacctcatggagtactccctcaacataagtggcctcatcgactttgctattcaactt
ctgaatgagctgagcctggtggaagccgagctgctgctcaaatcgtccagcctggtgggc
agctacaccaccagcctgtgtctttgcattgtcgctgttctgaggaggtaccactcctgc
ctcattctcaaccccgagcagacggcacaggtttttgacgggctacgcattgtggtgaag
tctggtgtgaacccagcagactgttgttccgccgagcgctgcatcttggcctatttgtat
gatctctacacctcctgcagtcacctcaagaacaaatttggcgagatcttcagtgagttc
tgctcaaaggtgaagaattccatctattgcaacatcgacccttcggactccaacatgctg
tgggaccccgtgttcatgatggaggccatcgccaacccttcggcacacaacttcaaccac
tccatggtgggcaagatcctcaacgacagcccggccaatcgctacagctttgtgtgcaat
gtgctcatggacgtatgtgtggaccaccgggaccctgagagggtgaacgatattgggatc
ctgtgtgccgagctgacggcatattgtcgctccctgagtgccgagtggctcggcatcctc
aaggccctctgctgctcctctaacaacggcaactgcggcttcaacgacttgctgtgcaac
gtcgacgttagcgatttgtctttccacgattccctggcaacctttgtagccattctcatt
gcaagacagtgtcttcttctggaagacctggtgcgctgtgtggccattccatcactcctc
aatgcagcatgcagtgagcaagactcggagcctggagcgaggctcacctgcagaatctta
ttgcacctttttaagacgccgcagcgcaaccctgtgccccaggatggcattaagtcagat
aagtcttctgtgggtatccggtcatcatgtgaccgccatctcctggcggcatcacagaac
agcatagttgtgggagctgtttttgctgttctcaaagctgtcttcatgttaggtgatgct
gagttaaggggctctggactgtctcactcggctggccttgatgacctgtcagagggccga
aatgtctccatagaaacagctagcttggacgtgtatgcaaagtatgttctgaagaccatc
tgccagcaggagtgggtgggggagcgctgtctgaagtctctgtctgaggacagcagtgcc
cttcaggatccggtgctggtcaacattcaggcccaacggctgctgcagctcatttgctac
cctcaccggcagttggacagtgatgacggtgacaacccgcagaggcagcgtatcaaacga
atcctacagaatatggaccagtggacaatgagacagtcatctctggaacttcagctgatg
atcaaacagagcacaaacaatgagctctattctcttttagagaacatagccaaggccaca
atcgaagtgtttcaaaaatcagctgagctgaactccaataacccctcagggaacggcgca
gtgctccaaagtggctctgcgtccaacagcagcagcaccaccagcaagataaaacctatt
ttaagttcgtccgaacggtcaggtgtgtggctggtggctccgttgatagccaagcttccc
acttcagttcagggacatgttctgaaggcagccggagaagagctggagaaaggacagcac
cttggttcgtcctcacggaaggagagggatcgccagaagcagaaaagtatgtccctgcta
agccagcagccattcctgtctttggtgttgacctgcctgaaaggtcaggatgaacagcgg
gagggtcttctcacctccctctacagccaagttcagcagattgtcactaactggagagag
gaccaatatcaggacgactgcaaggccaagcaaatgatgcacgaggccctgaaactgcgg
ctcaatcttgtgggcggcatgttcgacacggtacaacgcagcacccagcagaccaccgag
tgggccgtcctcctactcgacatcatcagcagcggaacggttgacatgcagtccaataat
gagctcttcacaaccgtgctggacatgctgagcgtactgattaatggcacgttggctgca
gacatgtccagcatctctcagggcagcatggaggagaataagagggcctacatgaatcta
gtcaagaagctcaggaaggagcttggggatcggcagtcggaaagcttggagaaggttcgc
cagctgctgccactacctaagcaaacacgtgatgtcatcacgtgtgaacctcagggttca
ctgatcgacaccaaggggaacaagatagctggttttgagaaagaggggcttcaagtgtcg
accaagcagaagatctccccctgggacgtcttcgagggcctcaaacactcagcccctctt
tcatggggctggttcggtacggtgcgcatggaccgcaaggtgaccaaatttgaggagcag
caacgcttcctactctaccatacgcacttgaagcccaagccgcgcagctactacctggag
ccgctcccactgccgcccgaagaagaggagccgctgacacctatctcgcaggagcccgag
aagaagatgctggaggccgtgaagccagagaagagcgtgccctccgtgccctctgattcc
aacaagaaaaagtcaaacaagaaaaaaaagactccgtcggcaaaaactgaggattacgtg
aaccgtacgcctggtgtgagctacggaacaaacatgccaccagagctcatgcagaatcct
tacagcaggttgccctatggccagcagagcatgggcatgtacacacagaaccagccttta
cctcctgggggacctggtttagatcctccttacaggcctgctcgcaatccccaaatgaac
aaaatgatgactacgcggcccagctacccgggcatgatgcccacaatgcagggcaacatg
ccaggaataatgggtatggagaaaccttaccaaatggtctacaagcctcagcctaacatg
cagcagaaccagatgctgcgtcaccagctgcaggtcagactggtgagtcaggctccactg
acaggtcaaactgctcctcaccagaatcacagcatgatagggcaacagatcagacaaatg
gcacccaaccaaccttattcttcaatgcagccatctcaaaacttatctcagggctacacg
tcatatggctcacacatggggatgcagccacacccgtcccaaggtggtgccatagttccc
tcctctttcggcaaccagaacttccagggcgcccacccaggagccaacccagccgtggtg
gatcctctaaggcaaatgcagcaaaggcccagtggttacgttcaccagcaagcaccggga
tacgcacacaacatgcagaacgcacagaggtttgcccaccagcccatccaacagaatccc
atcatgcacggtctcagtcacatgggaggccagggtggccctccgggcatgaggcccaat
cagattctgacagaacagcagcagcagcagcagcaacaacaacaacaacagcagcagcag
caacagcaacaacagcagcagcaacaacagcaacaggcagcagcacaacaacaacagcag
cagtacctcagacagcaagcactcagacagcagcaggctcaacaagttcatcaacaacaa
cagcagcagcaacagcaacaacaacagcagcaacaagtccagtcccagcaggtccctcct
caacagcaagtccctcctcaacagcaggttcctcagcagcagcagcagcagcagcagcaa
caacaacaacaacaacaacaacagcaacaacaacaacaacaacagcagcagcaacaacag
cagcagcaggtgtcaggcgtgcctccaccagggcagcaacagaaccagggtctgggcatg
caaccactgcctccacagcaacccatggtacgacccagcacattcccgcgtcagggcatg
cagcagacacagcaacagcaacagacagccgctctggtcagacaactgcaacaacaactc
tcaaatacacagccaggacagagcaccaattcatattactga
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integrated database retrieval system
