Syngnathus scovelli (Gulf pipefish): 125983963
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Entry
125983963 CDS
T08785
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04136
Autophagy - other
sscv04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125983963 (wipi1)
04136 Autophagy - other
125983963 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125983963 (wipi1)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125983963 (wipi1)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
125983963 (wipi1)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125983963 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_RSE1_2nd
Beta-prop_HPS5
CPSF_A
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_EML
BCAS3_WD40
EIF3I
RMC1_N
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
125983963
NCBI-ProteinID:
XP_049601640
LinkDB
All DBs
Position
16:complement(4409842..4416445)
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AA seq
445 aa
AA seq
DB search
MESAVGASGPGGPDGPDGPGVRFRCASFNQDATSLALGTKTGYKLFSLTTGDKLDCIHES
AEASNVYIVERLFSSSLVVVVSTPTPQRMNIYHFKKGTEICNYSYPNNILAVKLNRHRLV
VCLEESIYIHNIKDMKLLKTLLNIPSNPSGLCALSTNHSNSYLAYPGSTTMGEIIVYDAK
NMSTVTMVPAHDSPLAALCFNASATKLASASERGTVIRVFSIPEGFRLFEFRRGMKRYVN
ISSLSFSPDAQFLCASSNTETVHIFKLEQEGPSGEETDTWSAYVGKMFTAASSYLPAQVS
GMMSQDRAFATVHLVTSGQNICALATIQKHPRLLVATADGQLFIYNVNPQDGGECMLAYN
HRLLGVDDLMPAQVCPSYAATVALPASSPITATLTGYSEDGGAKNGEVIPEHEFADGPVC
LDDENEFPPISWCRDGTGVGRGRRS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagcagtgggtgccagtgggcctggtggaccggacggaccggacggaccggga
gtccggtttagatgcgcctcgttcaaccaagacgctacgtcattggctttgggaacaaag
actgggtacaagctgttttctttgaccacaggggataaactggattgcattcatgagagt
gcagaggcttccaacgtttacatcgtggaacgtctcttctctagcagtctggtcgttgtc
gtaagcacccccacaccacagcgtatgaacatctaccacttcaagaagggtacagagatt
tgtaactacagctaccccaacaatatactggctgtcaagctcaacagacataggcttgtt
gtatgcctggaggaatccatttacatccacaacatcaaagacatgaagctgctcaagact
ctgctcaacattccgtccaacccttcaggcctctgtgctctatccaccaatcattccaac
tcctacctggcataccctggcagcactacaatgggagagataatagtttatgatgccaaa
aatatgagcacagtgacgatggtcccggcacacgacagtcctctggcagctctttgtttc
aatgcctcagccaccaaacttgccagcgcctcagagcggggcactgtaatccgagtgttt
tccattcctgagggcttccgtctatttgaattccgtcgtggcatgaagaggtacgtcaac
ataagctctttgtccttcagtcctgatgcccagttcctctgtgcttccagcaacaccgaa
acagtacatatctttaaactggagcaagagggaccaagtggagaagagaccgacacttgg
tcagcgtatgtggggaagatgttcacagcagcaagcagctacctacctgctcaggtgtct
ggcatgatgagccaggaccgcgcctttgccacagttcatcttgttacgtcgggccagaat
atctgtgctctggccacgatccagaagcatccacgtttgctggtggctacagctgatggc
cagcttttcatctacaatgtgaatccacaggatggaggcgaatgcatgttggcatacaat
cacaggcttttgggtgttgacgacctgatgccagcacaagtgtgtccctcatatgctgca
actgttgccttaccagcatctagtcccatcacagcaactcttactggttactctgaagat
ggtggggcaaagaacggggaagtcatcccagaacacgagtttgctgatggacccgtgtgt
ctggatgatgagaacgagtttcctcctattagttggtgtcgtgatgggaccggagttggc
cgggggaggcgctcgtga
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