Syngnathus scovelli (Gulf pipefish): 125984010
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Entry
125984010 CDS
T08785
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125984010
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125984010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_NWD2_C
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WHD_NWD1
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
NPHP3_N
Beta-prop_ACSF4
Beta-prop_EML
AAA_16
NACHT
AAA_22
Tricorn_2nd
Beta-prop_Aladin
AAA_28
Beta-prop_NUP159_NUP214
PQQ_2
AAA
NPHP3
TniB
B-prop_COPA_B_2nd
YdiH
Motif
Other DBs
NCBI-GeneID:
125984010
NCBI-ProteinID:
XP_049601740
LinkDB
All DBs
Position
1:complement(27064625..27080937)
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AA seq
1744 aa
AA seq
DB search
MKRMNPRWKSPPMWPSGVGSRQPCPRESALRRAAISGNVLALPPHHVPSGRSVRVFICAN
PDDTEAERNALKEHVYPKLRDFCRENYGIEFQVVDLYWGVDPEEWDSPELQRLRMKLLEE
CLKTSAGPCFVGLVGEKYGSIRVPGEVESAEFEMILDAAVEAGLDTHILDEWYCRDENSV
PPAYYLKPKAQMLKKYQNLMESSSAAKTKNDKAWRKVSEEIKRIFRTAVLQLQEKGTMPS
TQAKKFLCSALEDELDFALGKQTPAFLRKCVCYIRKISNFDRFAKLPEMTRYMDIVMSGD
RIMRNQEAYERLLKVRDEFIPTVVAASNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQF
YEDMVDIIQATVQQNFDTETDPLYDEILQHLSLCKAYAALHEYETESLDYVQEYLLPSKG
SRMSPLVVHGGPCTGKTLLLAEVAKQAYTWLQKETGPETDPVVIVRFIGSSQPSTDLRTL
LQSICEQIAINYRCLIHFMPTKIQEMRELLVNLLGESSFHRPLVIILDALEQLSDADEAR
KLWWLPIQLPRTVRIVVSTLPNKHGILQKLRHVIHDEDNYVELIQRDRKVCSQTLKQQLL
GVKRKVTSGQQIYVNEALAKCTLPMFVNLIYREVVHWRSHKDVDEKSLCSTVHESIEQLF
YSVENKLGQRFVCRALGYITMAKAGLTEIELEDILSLDNIVLGDVIVVSYLKNPLRISCD
LVARLKEELEGYLVERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGA
WSGGRKKIFTYDNNHFTSQNISHHKNPHHQQSHEKTSSDKYSYDRQTPEQPWVFQCNLLE
PDIFFVNHRKMTELVFHLTRSGRTDDLMFGVIMNFSWLYTMIKIGQFEKVLNDIDLAYSY
TQEKELKFLSTTLRSIKVKVLKNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGPKYC
SIVPLHSSMDVTYSPERLPLSSSYMHIVEILPTLAPNIVLVALEDGSVSTWDVESRQLLR
QIDTARSVVLGIRLTTDEKYLVVATTKNTLLIYDNHKSCLLSEVEIKGSKHGGIAGGVAF
INGFTLSTHHALAWLEASKDVNVIDLLYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLN
TASIFHLGNGDKLATVTSEFSGGFVKSILVLDTINQMVMIDNEGSLSVWNTKEITNPRLM
EDYDCRGDDSEVVSIELSEDQRSILLCKATSIEVLDTKVWKMVEKFKAKRSERFVAAVLS
KNGQSIVASMENTSSIFVWRRDSGQCMASLIEISGAIVKLIKSVHHNLLLSVASSGVLSV
WDIDIITAMSNIDKTGKKIQTLQLSGREDYVFTMDGSEAVHKWNFSTGFIETVFKHEGIV
ENCVLTSSGDLMVTSDDKCSQYIWQTNTGENIFRINGQRISQLLITHNDQFVVSLCEQNA
SRVWRLATGHKVCNILVTLQNALITTANTFLVGTSKNKLLAVSLWSGSVSKKFVCDDGIT
IVNFKLIPDCPDCVVFITSTETVFIWSVADEAVCRRVQLPANFLKNLEDFQISPNGKQGI
VSKGDENINVLDLHSGKLRLVHAAGIIWRQKLSRDGRYLVYVCFRNCDEDDDAGVVSNLI
VMRLADGKSIGTCSLYKTPTFLSLSQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATS
NSRQIVNNASQKVRPKCGNHSFKTVADCIWRESTEVFSRDSPINVSDSGEGESTTPTKKT
ELLQ
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggatgaatccacgctggaagtcgccccccatgtggccgtcgggagtgggcagc
cggcagccttgcccgcgggagtcggcgctgcgcagggcggccatcagcggcaacgtcctg
gccctgccgccgcaccacgttcccagcggccgcagcgtgcgtgtcttcatctgcgccaac
cctgacgacacagaagcagaaaggaacgcgctgaaagagcacgtctaccccaaactacgt
gacttctgcagggagaattacggcattgaattccaggtggtggacctctactggggcgtg
gatccggaggaatgggacagtccagagctgcagcgactcaggatgaagctcctggaggaa
tgtctgaagacgtcagcgggaccgtgcttcgtgggtttagtcggagagaagtacggcagc
atccgagtcccaggggaggtggaatcggcagagtttgagatgatcttggatgccgcggtg
gaggccgggctggacacacacatcttggacgagtggtactgcagggatgaaaactctgtg
ccacccgcatactacctcaaacccaaagcccaaatgcttaagaagtaccagaacttgatg
gagtccagcagcgcagccaaaaccaagaatgacaaggcctggaggaaagtgtcggaggag
atcaagcgtatcttccggactgcggttctgcagcttcaagaaaaggggacaatgccgagc
actcaggccaaaaaattcctttgctctgccttggaagacgaattagactttgccctcgga
aaacaaactcccgcctttctcaggaaatgcgtttgctacattcgcaagatttcaaacttt
gaccgcttcgcaaaactcccggagatgacccgctacatggacatcgtgatgagcggcgac
cgcatcatgcgaaaccaggaagcgtacgagcgcttgctgaaggtccgcgacgagttcata
ccaaccgtggtggccgcgtccaacctccgcgtttactcgtcggtcacgcactgcgacatg
aagctaggctactcccaggaagtggagagtcactatgtggagggactatgtaaacagttc
tacgaggacatggtggatataattcaggccacggtccagcagaactttgacacggagact
gacccgctgtatgatgagattctccagcacctgtccctgtgtaaagcctacgcagcgctg
cacgagtacgagaccgagtccttggattacgtccaggagtaccttttgccatccaagggg
agtaggatgagtccgctagttgtgcacgggggaccctgcacgggaaagacactgctactt
gctgaagttgccaaacaggcctacacgtggctgcagaaagagacgggcccggaaacagac
cccgtggttattgtccgtttcattggctcgagtcaaccctccacagatttgcgcaccctt
cttcagagcatctgtgaacagattgcaataaactaccgctgcttgattcactttatgcct
accaaaatccaggaaatgagggagctcctcgtcaacctgcttggagaatcgtcctttcac
aggcccttggtcatcatcctggatgccctggagcagctgtccgacgctgacgaagctcgc
aagctgtggtggcttcccatacaactccctcggacagtccgcattgtcgtctcaacgttg
cccaataaacacggaatcctgcagaagctccgacatgtcatccatgacgaggacaattac
gtggagttgatacagagggaccgcaaggtctgcagccagacgttaaagcaacaattactc
ggggtaaaaagaaaggtcacctcgggccaacaaatctacgtcaacgaggctctagcaaag
tgtacgttgccgatgtttgttaacttaatctacagagaggtggtgcactggaggtcccac
aaagacgtggatgagaaatccctgtgctctacggtacacgaaagcatagaacagttattc
tattccgtagagaacaagttgggccaacgattcgtctgccgagcgttggggtacatcacc
atggccaaagcagggttaactgagattgagctggaggacattctttccctggacaacata
gtccttggagatgtcattgtggtatcgtacctcaaaaaccccttgaggatttcttgcgac
ttggtggcacggctcaaagaagaactggaaggttacctagtggagcgtcaggtgcgtaac
gtcaccctgatggtctgggccaaccgccatctgcatctcattgcccagaagttgtacctg
agcaacgaggaagacgtccatcaaatgcacagcctcctggccgagtacttcctgggggcg
tggtcagggggcaggaagaagatcttcacttacgacaacaatcattttacctcccaaaat
atatcgcaccacaaaaatccccaccaccaacaatcccatgagaagacatcatctgacaag
tactcatacgacagacaaactcctgagcagccttgggtcttccagtgcaaccttctggag
ccggacattttttttgtcaaccacaggaagatgacagagctggtgttccacctcacccgg
agcggccgtacggatgacctcatgtttggtgtcatcatgaactttagctggctgtacacg
atgatcaagatcggacagtttgagaaggttttaaacgatatcgacttggcctacagctac
acccaagaaaaagagttgaaatttctatccactactcttcgtagcatcaaagtgaaggta
ttgaaaaacccagcgtcgctttctgcagaactgcagcagaggcttttgccagttgtcacc
tccctgcccaaactcaggcatctccttctggagtgcgacaaggacggtcccaagtactgc
tcgattgtgcctcttcactcctcaatggacgtcacttacagtccagagaggctacctttg
agctcaagttacatgcatattgtcgagatcttgcccactctagcccccaacatagtcctt
gtggcccttgaagatgggtctgtaagcacatgggacgttgagagcaggcaacttctacgg
cagatcgacacagccagatctgtggtgctcggaatcaggttaaccaccgacgagaagtat
ttagtcgtggccacgactaaaaacacactccttatctacgataatcacaaatcctgcctt
ttatcagaagttgaaatcaaggggtcgaaacatggcggcatcgccggcggggtggccttt
atcaacggctttactttgtcaactcaccacgctttagcttggctcgaggctagtaaagac
gtcaacgtcattgacttactttacggctggcctctttatcagttccattgctggtacgag
gtgacttgtgtccagtgctcaccggatggaatgtatgccttctgcggacagtacctcaac
accgcatccatcttccatctggggaacggggacaagttagccaccgttacctcggagttt
tccggcgggttcgttaagtccattctcgtcctcgacacaatcaaccaaatggtgatgatt
gacaatgaggggagtctgtcggtatggaacaccaaagaaatcaccaacccacgtctgatg
gaggattacgactgcaggggagatgatagcgaagtggtgagcattgagctttcggaagac
cagcgctcaattctgctttgcaaggccacaagtattgaggtgctcgataccaaggtatgg
aaaatggtggagaagttcaaagcgaaacggagcgagcgctttgtcgctgcagttctttcc
aagaacggacaaagtatcgtggcttcaatggagaacacctcttccatttttgtgtggagg
agggacagcgggcaatgcatggcgagcctgatcgagatatcgggggccatcgttaaactc
atcaaatcggtccaccataacttgctgctttctgttgccagcagtggagtgctgtcggtc
tgggacattgacatcatcaccgcaatgtccaatatcgacaaaacaggcaagaagatccag
acattgcagttgtccggcagagaggattacgtgtttaccatggatggctcggaagcggtc
cacaagtggaacttcagtactggattcatagaaacggtcttcaagcacgagggcatcgtt
gagaactgcgtgctcacctcctcaggggatctaatggtgacttcagatgacaagtgcagt
cagtacatctggcaaaccaacaccggggagaacatttttcggatcaatgggcagagaata
tcccagctgctaatcacccacaacgaccagtttgttgtgtcactctgtgaacaaaacgct
tcgagagtttggagactagctacaggtcataaagtgtgcaacatcttggtcactctccag
aatgctctgatcaccacagccaacacgttcttggtgggcacgtccaaaaacaagctgcta
gccgttagcttgtggtcgggcagcgtctccaagaagttcgtgtgcgacgacggcatcacc
atcgtcaacttcaaactcattcccgactgccccgactgcgtcgtgttcatcacctccacg
gagacggtcttcatctggagcgtggcggacgaggccgtttgcaggcgtgtccagttaccc
gccaactttctaaaaaatctagaggacttccagatctcgcccaacggcaaacaaggaatc
gtgtccaaaggtgatgagaatattaacgtgctggacctacacagcgggaagctgaggctc
gtccacgccgccggtatcatctggcgtcagaagttatcacgagacggccgttacctcgtc
tacgtctgcttccgtaactgcgacgaggacgacgacgccggcgtggtgtccaacctgatt
gtgatgcgacttgccgacggaaagagtatcggcacgtgctccttatacaagacccccacg
ttcctttcactctctcagagagccctgaacatcatcattggctttgaggacggcagcatc
ggcacatataccgtggtggaccgtgtagacgccgcccttaagatcaagatagccacatcc
aacagccggcagatcgtcaacaacgcttcgcagaaggtccgtccgaaatgtggcaatcat
tcctttaagaccgtcgccgattgcatttggagggagtcgacggaggttttctccagggac
agccccatcaacgtgtctgactccggtgaaggtgagtctactacgcctacaaaaaagacg
gagctgctgcagtga
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integrated database retrieval system
