Syngnathus scovelli (Gulf pipefish): 125984065
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Entry
125984065 CDS
T08785
Name
(RefSeq) mucolipin-1 isoform X1
KO
K04992
mucolipin 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125984065
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125984065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125984065
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125984065
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GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
125984065
NCBI-ProteinID:
XP_049601837
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Position
16:2490960..2497569
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AA seq
592 aa
AA seq
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MASPRCTQELSTENDRLLSSKGLSYGSQNLLGDGQMSSDLHQHHDEEEEEALRRKLKYFF
MSPCDKYHAKGRKPFKLGLQLLKIIIVTVQLVLFGLSNQMVVTFKEENTATFKHLFLKNY
QDNTPQAVHTQKELHSHITFAIEQYLALPQISLGQYAYVEGVGFNGSALSLCQRYYRRGA
IVPVNDTFDIDPHVITDCIGIDPPAFGFAPGKSDYRNFTLNFYKLINVTVDFQLKAINIQ
TIINNEIPNCYTFAITILMDNRAHSGKVKISLQNRASIKECKDPNVSGHAENYAREFFDV
LVALVCLLSLLLCGRSILRGVLLQHEYAQFFQTRLGRGVSCGDRMEFINGWYILLIVSDM
FTIIGSFIKIGIESKNLSSYDSCAILLGTSTLLVWVGVIRYLSFFQKYNVRLSHTNHTFC
FVSPKESYYFPPFCFSTQILIVTLRAAFPNVIRFCCCAAAIYLGYCFCGWIVLGPYHTKF
RSLPMVSECLFSLINGDDMFVTFAEMEQTGTLVWIFSQVYLYTFISLFIYMVLSLFIALI
TGAYDTIMAQTQEQVRITDLQAFIAECTDTPCSGKFRGPEGSSCSFFCCCDW
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccgaggtgcactcaggagctttccacagagaatgacaggctactctcttcc
aagggtcttagctatgggtcgcagaaccttcttggggatggacaaatgagctctgatctg
catcagcatcacgatgaagaggaggaagaagccctgaggaggaagcttaaatatttcttc
atgagcccttgtgataaatatcatgccaagggacgcaaaccattcaagctaggactgcag
ctgctcaaaatcatcattgttacagtgcagttggtgctatttgggctaagtaaccagatg
gttgtgacctttaaagaagaaaacacagccacattcaaacatctcttcctgaaaaattac
caggacaacactcctcaggctgttcacacgcagaaagaactgcacagccacatcaccttt
gccattgagcagtatctagctctccctcagatctcactgggacagtatgcttatgtagaa
ggtgtcggcttcaatggaagtgcactctcactctgccagaggtattacaggaggggcgcc
atcgtcccagtcaatgacacttttgacatcgatcctcatgttatcaccgactgcatcgga
atcgatccgccggcttttggttttgcccctggaaaaagcgactacagaaacttcactctc
aatttttacaaactgatcaatgtcacggtggacttccagctgaaggctatcaacatacag
accatcataaacaatgaaataccaaactgctacacctttgcgatcacgatcctcatggat
aaccgagctcacagtggcaaagttaagatcagtttacagaaccgagcctccataaaggaa
tgcaaggatcctaatgtttccggacatgcggagaactacgcgcgagagttcttcgacgtg
ttggttgctctcgtttgtctactttctctgttgctgtgtggacgctccatcctcagaggt
gttcttctgcaacacgaatacgcacagtttttccagaccagacttggccgtggtgtgagc
tgcggagaccgaatggagttcatcaacggctggtacattctcctcattgtcagtgacatg
tttacaatcatcggcagcttcattaaaattggaattgaatccaagaatttgtcatcatat
gactcatgtgcaatcctgctgggaacgtccacacttttagtgtgggtgggagtcatccgc
tacctcagtttctttcaaaaatacaacgtaagactttcgcacacaaatcatacattttgt
tttgtctctccgaaggaatcttattatttcccgccgttctgtttttccacccagattttg
attgtgactctcagagcggcattccccaatgtcatccgcttctgttgctgtgcagctgct
atatatttgggatactgcttctgcggatggatcgtcctgggaccgtatcataccaagttc
cgctccctgcccatggtatccgagtgcctcttttccctcatcaacggcgacgacatgttt
gtgacgttcgccgagatggagcaaaccggcacgctggtgtggatcttcagccaggtctac
ctttacaccttcatctctctcttcatctacatggtgctgtcactcttcatcgcgctcatc
accggagcctacgacactattatggcccaaacgcaagagcaggttcgcatcactgatctt
caagcattcatcgctgagtgcaccgacacaccttgctccggcaaattccgaggtcctgag
gggtcgtcgtgctcttttttctgctgctgtgattggtga
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