Syngnathus scovelli (Gulf pipefish): 125984095
Help
Entry
125984095 CDS
T08785
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125984095 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125984095 (usp43b)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125984095 (usp43b)
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125984095 (usp43b)
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125984095 (usp43b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
125984095
NCBI-ProteinID:
XP_049601901
LinkDB
All DBs
Position
16:2831792..2857992
Genome browser
AA seq
1183 aa
AA seq
DB search
MMRSGRSDPRGTSLGAAMEKKQEMPTSKERKEKKPRSVKLFRKKSLKSVGSFMNRIIKTL
GTFTHFADTQDVEDDDGGFGNGAPCTLSASSGIVKEDAQVPRLVKNPPIGRDKLLYHYGD
KMPGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLERYRLDLCDTAIDGTVRSGGMLFI
NGEVTEHLASLVRALWTLEYTPQLSVDFKAIVSKYGSQFRGNSQHDALEFLLWLLDRVHE
DINLASHNNNNTTKTCDKGPDEDENLLHPDLSQSQQLTVQHSFVQEHFQAQYKSSLTCPH
CLKQSNTFDPFLCISLPIPLRQTRPMCVTLVFSTKGQRYLRVGLAVPLFGSVASLRRMVA
DEGNISPDQVILTEVYSTGFQRSFFDENDLTGIAENDVIYAFQAPPLYIRGGSARTSGYH
HSLPSSTYATGPEGKRLPASAALSSEFLNQGVPVKILLLVCNAAGAGQQTVRFGPPFLMR
EDRSISWDQLQQSILSKLYYLMINGAPAQNNRVLFNIRVVGGSSFYSYLSPQDSRPLYHP
AVDRALKLCSPGGPPHVKLIIEWEYRIKDCLFGNIQEEVVKDADSVRNQQQQHVQQYSCT
LDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNK
LTTFVQFPLVDLDMTPHVVNRNHNPQQGWKQPRRAELAPPDFLYDLYAVCNHHGGMHGGH
YTAFCRNSVDGQWYSYDDSNAEAVPEGDVCTRGAYILFYQRRKTIPPWSASSSVTGSTSS
NTSDHWLVRLTGPGDRGAASIAGPPVPMQPPESTDRPVFEEEPHKTADTNGFESKPFVRG
TQARSISMRSPTKAKESLSKVLPMRWSFRAKDRTKHSVETQSGELVEYLESGRRPRCTKD
PIVALVATPPQRHVQRRTLEGGQECSSPSGSSLSCTETCYSPKIPEGQSRPVMERQLSNA
VKGRDDGSLRMRASNKRTRQEQGRTLDIQLQRVAMLGAHVSSHSAPPSRDSTLRKNKVHF
GESTRSPKDTLVFQPEGQRGREGRSQESLVAFFKPALKDIPRSPRKDHERRANGHLGKLT
SGDFTKLSLSNGTLSTTARDERKVLPCCKIQLLNGQAACHDADIKRAHSSGNIQTKLDGT
FHRCASLQRNGDITPSRRVLLSDKPGFATLQRTRFSTTSLVPL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggagtgggagatccgacccacgggggactagtttaggtgccgctatggagaag
aagcaggaaatgcccacgtcgaaggagcgtaaagagaagaagccgagatcggtgaagctt
ttccggaagaaatcactcaagtccgtggggagttttatgaacagaatcatcaaaactctt
ggtactttcacccactttgcagacacgcaggacgtggaggatgacgatggaggctttggg
aatggcgcaccttgcacactcagcgccagctcagggattgtcaaagaagatgcacaggtg
cctcggttggtcaagaaccctccgattggcagggataaactactttaccactacggggat
aaaatgccaggcgttctgggattgaaaaatcacgggaacacgtgttttatgaacgccgtg
gtccagtgtctgagtaataccgacctgctggccgagtatttgggactggagaggtacagg
ttggacttgtgtgacaccgcgattgatgggacagtgagaagcggggggatgctctttatt
aacggagaggtcacggaacacttggcctcacttgttcgggctctgtggactttggaatac
accccacagctttctgtggacttcaaggctatcgtgtctaagtacggatcacaattccgg
ggtaattcccaacatgacgccctggagttccttctgtggctgctggatcgtgtccatgaa
gatatcaatttggcttcgcacaataacaataacacaactaaaacttgtgataagggtcct
gatgaggatgaaaatctgctgcatcctgacctgtcccaatcacagcagctcactgtccaa
catagctttgttcaggaacattttcaggcacagtacaaatcttcactgacctgcccccat
tgtttgaaacagagcaacacctttgaccctttcctttgcatctcactccctattcctctt
cgccagaccaggcccatgtgtgtgactctggtcttcagcactaaaggtcaaaggtacctg
cgagtcggtctggccgtgcctctatttggttctgtcgccagtttgagaaggatggtggct
gatgagggcaacatttctccagatcaggtgatcctgactgaagtttactccaccgggttc
cagcgctccttctttgatgaaaacgatttaaccgggattgccgagaatgatgtcatctac
gccttccaagctccgcccctttacatccgaggaggctctgcacggacttcaggataccat
catagtctaccatcttctacatacgctaccggtcctgaggggaaaagattacctgcgtct
gcggcgctgtcttcagaatttctcaaccaaggagtcccggttaagattttgttgttggtg
tgcaacgctgcaggagcaggccaacaaactgttaggtttggccctccattcttaatgagg
gaggatcggtctatttcctgggatcagctgcaacaaagtattctgagcaagctttactat
ctgatgatcaacggggcgccagcacagaataacagagtgctcttcaacatccgcgtggtg
ggaggatcatcattttacagctacttgtcaccgcaggacagtcgaccgctctaccatcct
gctgttgacagagccctgaagctctgcagcccaggaggacctccacatgtcaaactcatc
attgaatgggagtatcgaatcaaagattgcctgtttggtaacattcaagaggaggtggtg
aaggacgcggacagcgtgaggaatcagcagcagcaacacgtccagcaatacagttgcacc
ttggatgagtgttttcagctctacaccaaagaggagcaactggctcctgatgatgcttgg
aagtgcccgcactgtaaacagctacagcagggcatggtgaagatgagtttatggactctt
ccggatattctcatcctccacctgaagcgttttaggcaagtaggcgagcggagaaacaag
ctgactacatttgtacagttccccctggtggatctggacatgacgccgcacgtggtgaac
cgtaaccacaacccgcagcagggatggaagcagcccagacgggccgagctggctccacct
gacttcctgtacgatctgtacgccgtgtgtaatcatcacggagggatgcacggcgggcat
tacacagcattttgtcgaaactctgtggacggtcagtggtacagctacgatgacagcaat
gctgaggcggttcctgagggagatgtttgcacacggggtgcttatatcctcttctatcaa
agaagaaaaaccatcccaccctggtctgcaagttcttcagtcactggttccaccagctca
aacacttctgatcactggttagtccggctgacggggcccggtgaccgaggtgcagcgtcc
atcgcaggccccccggtgcccatgcagcctccggaatcaactgatcggccagtgtttgaa
gaagaacctcacaaaactgctgacacaaatggatttgaatccaaaccgtttgtccgcgga
acccaagcaaggagcatcagcatgagatctccaacgaaagccaaggagtctttaagcaaa
gtcctgcccatgcgatggtccttcagagccaaggaccgcacgaagcattcggtggagact
caatcgggagagctggtggaatatctcgagtcgggccgacgtccgcgatgtaccaaagac
ccgattgttgcgctggtggccaccccgccgcaaaggcacgtccagcgtagaaccttggag
ggcggacaggagtgcagctcaccgagcggaagtagcctcagctgcacggaaacgtgctac
tcccccaaaatcccagaggggcagagccggcctgttatggagagacagctcagcaatgct
gtcaaaggcagggatgatggctccctgaggatgagggcatctaataagagaaccaggcag
gagcaaggtaggactttggacatccaacttcagagagtggccatgttaggagcacacgtc
agcagtcatagcgcacctccaagcagagattccacactgcgaaaaaacaaagtccatttc
ggggagagcaccagatcccccaaagacacgctcgtctttcaacctgagggacaaagagga
cgtgaaggtcgtagccaagaaagcctcgtggccttttttaaacccgctttgaaagacatc
ccgagatccccacggaaggatcacgaaagacgtgccaacgggcatttgggaaagctgacc
agcggcgacttcaccaaactctccctctctaacggaactctgagcaccaccgcaagagat
gaacgtaaggttctcccttgctgcaagatccagcttctgaatggacaggccgcgtgccac
gacgccgacatcaagcgagctcacagctccggaaacattcaaaccaaactggacgggact
tttcaccggtgcgcctcactgcagaggaacggggacatcacgccctcacgtcgcgtcctg
ctctccgacaaacccggatttgccaccctgcagaggacccgattcagtaccacctccctg
gtgcctctgtga
DBGET
integrated database retrieval system
