Syngnathus scovelli (Gulf pipefish): 125984109
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Entry
125984109 CDS
T08785
Symbol
smurf2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
sscv04137
Mitophagy - animal
sscv04144
Endocytosis
sscv04340
Hedgehog signaling pathway
sscv04350
TGF-beta signaling pathway
sscv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125984109 (smurf2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125984109 (smurf2)
04350 TGF-beta signaling pathway
125984109 (smurf2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125984109 (smurf2)
04137 Mitophagy - animal
125984109 (smurf2)
09144 Cellular community - eukaryotes
04520 Adherens junction
125984109 (smurf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125984109 (smurf2)
04121 Ubiquitin system [BR:
sscv04121
]
125984109 (smurf2)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125984109 (smurf2)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125984109 (smurf2)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125984109 (smurf2)
Autophagy
Mitophagy
Other mitophagy associated proteins
125984109 (smurf2)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
HECT type E3
125984109 (smurf2)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125984109 (smurf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
125984109
NCBI-ProteinID:
XP_049601959
LinkDB
All DBs
Position
16:2892258..2918720
Genome browser
AA seq
770 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCIRLLSNAINRLKDTGYQRLDLNKL
SPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPISTNGATPTTALPPNDGDQRAQERRVRSQ
RHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHRVLNPSPNGSRGGIESQNVSR
QNPLKDQVQQTLVSTSHLQEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVS
REEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQ
YSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPIT
LDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQDTK
KEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIICGLGKIDINDWK
SNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLF
TIHQIEANTNNLPKAHTCFNRIDIPQYESYDKLYDKLLTAIEETCGFAVE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcggaatggacccgtgaagctgcgattaacagtcctctgt
gccaaaaacctcgtcaagaaggactttttccgcctccctgatccttttgctaaagtggtc
gtggatggttctgggcaatgccactcaacagatactgtgaggaacacacttgaccccaag
tggaatcaacactatgacctatacatcgggaaatcggattccatcaccatcagtgtgtgg
aaccacaagaagattcacaagaagcaaggagctggtttcctgggatgcattcgccttttg
tccaacgctatcaaccgccttaaagacacaggctaccagagactagacttgaacaaactg
agtccaaatgacagcgacacagtccgaggtcagatcgtggtgagcttgcagtccagagat
cggataggcacaggaggcccagtggtagactgcagtcggctttttgacaacgatcttcca
gacggctgggaggagaggagaaccgcatctggacgaatccagtacttgaaccacatcacg
cgcaccacacagtgggagaggccgaccagacccgcgtccgagtactcaagccccggtcgg
ccgcttagctgcatcgtggatgagaacacacctattagcacaaacggcgccacgcccact
acagcgttgccaccgaatgacggtgaccagcgggcccaggagaggcgcgttcggtcccag
aggcaccgcaactacatgagcagaactcacctccacacaccaccggacctcccggagggc
tacgaacagaggaccacgcaacaaggccaagtgtactttcttcacactcagacaggtgtc
agcacatggcacgaccccagagtacccagagatttgagtaatgtgaattgtgaggaactg
ggtccgctacctcccggatgggagatccgcaacacggcgacagggagagtatactttgtg
gaccacaacaaccgaaccacacaattcaccgacccacgcctctctgctaacttacaccga
gtcctcaatccaagcccaaatggttctcgaggaggcattgaaagtcagaatgtgagtcgt
cagaacccgttgaaggatcaggtccagcagactctggtgtccacaagtcacctccaagag
gaggcagagtgtctcacggtacccaagtacaagcgagacctcgtccagaaactcaagatc
cttcgacaggaactgtctcagcagcagcctcaagctgggcattgtcgcattgaagtgtcc
cgtgaggaaatatttgaggaatcctatcgacaagtgatgaagatgaggccaaaggactta
tggaaaaggctaatggtgaagtttcggggagaagaaggacttgactatggtggagtggcc
agggagtggctctatctattatcgcacgagatgttgaacccgtactacggcctgttccag
tactcacgtgatgacatctacacgttgcagattaacccagactctgcagtcaaccctgag
cacttgtcgtacttccattttgtgggccgtatcatggggatggcagttttccatggccac
tacattgatggaggatttaccttacccttctacaaacaactcctcggtaaacccatcacc
ctggacgacatggagtctgtggacccggacctccataacagtctcgtttggatcctggac
aatgacatcacaggcgtgttggaccacaccttctgtgtagaacacaatgcctacggagag
atcatccagcatgagctcaagccaaatggaaaaagtatccccgtcactcaggacacaaaa
aaagaatatgtccgcctctacgtcaactggcgcttcctgcgcggcatcgaggctcagttc
ctcgctctgcagaagggcttcaatgaagtcatcccccaacacctattaaaggcttttgac
gagaaagagcttgagctgatcatatgtggcctgggtaaaattgacatcaatgactggaag
tccaacacacggctcaaacattgcactccagatagtaacattgtcaagtggttctggaaa
gctgtggagtcttttgatgaggagcgaagagcccgcctactacagtttgtcacgggttct
tctcgagttccactgcagggcttcaaagccctccaaggtgctgctggtccacggctattc
accatccaccagattgaggctaacaccaacaacctccccaaagcccacacatgtttcaat
cggatcgacattcctcaatatgaaagttatgacaaactatatgacaaattgctgaccgcc
attgaggagacatgcggctttgctgtggagtga
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