KEGG   Syngnathus scovelli (Gulf pipefish): 125984192
Entry
125984192         CDS       T08785                                 
Symbol
polr2f
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03020  RNA polymerase
sscv03420  Nucleotide excision repair
sscv04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125984192 (polr2f)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125984192 (polr2f)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    125984192 (polr2f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sscv03021]
    125984192 (polr2f)
   03400 DNA repair and recombination proteins [BR:sscv03400]
    125984192 (polr2f)
Transcription machinery [BR:sscv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     125984192 (polr2f)
  RNA polymerase III system
   RNA polymerase III
     125984192 (polr2f)
  RNA polymerase I system
   RNA polymerase I
     125984192 (polr2f)
DNA repair and recombination proteins [BR:sscv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125984192 (polr2f)
SSDB
Motif
Pfam: RNA_pol_Rpb6 CENP-B_dimeris
Other DBs
NCBI-GeneID: 125984192
NCBI-ProteinID: XP_049602106
LinkDB
Position
16:complement(3274632..3276236)
AA seq 127 aa
MSDNEDNFDDGDFDDAEEDEELDDLENPEDEDQENVQILPAGDGQQANQKRITTSYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKCGKIPLIIRRYLPDGSYEDWGC
DELIIND
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcggacaacgaagataatttcgatgacggagattttgatgatgccgaagaggatgaa
gaattagatgacttggaaaacccagaagatgaagatcaagagaatgtacaaatcctacca
gccggcgatggccagcaggccaaccagaagaggataacaacatcatacatgacaaaatat
gagcgagccagagttttgggaacaagagctctccagatagcgatgtgcgcacccgtcatg
gtggaactggaaggagaaacggaccccttacaaattgccatgaaagagctcaagtgcgga
aagatccccctcatcatccgccgataccttccagatgggagttatgaagactggggctgc
gatgagctcatcattaatgattaa

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