Syngnathus scovelli (Gulf pipefish): 125984428
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Entry
125984428 CDS
T08785
Name
(RefSeq) transcription factor HES-1
KO
K06054
hairy and enhancer of split 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03460
Fanconi anemia pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
125984428
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125984428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125984428
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125984428
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
125984428
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
125984428
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GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
125984428
NCBI-ProteinID:
XP_049602225
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Position
17:complement(11208590..11212641)
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AA seq
235 aa
AA seq
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MPAGTLERTSSSAPSENSTVESTRSQMTGRKSSKPIMEKRRRARINESLGHLKTLILDAL
KKDSSRHSKLEKADILEMTVKHLRNLQRFQMTAVVTTDSSVLGKYRAGFSECVGEVTRYL
SACDEVNSEARTRLLSHLAARVSQMNAVNFYTPHSGPLGQTGINALQGPCKSISPIGPPA
DTMNLHSSYQVVPTPDGHFAFLVPSAALTPLSAQSGQYMSPGAPPLTSDSVWRPW
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgccggccggtactttggaacgaacatcttcatccgcgcccagtgagaactccactgtg
gaaagtacacggagtcagatgacgggcagaaaatcttccaaacctattatggaaaagcgg
agacgcgcgcgcatcaacgagagtctcggccatctcaagactctcatcttggacgcactc
aagaaagatagctccagacactccaaattagagaaggcagatatcttggaaatgaccgtg
aagcacctcaggaacctgcaacgatttcagatgacagctgttgtgaccacggactcatcc
gtcctgggtaaataccgggccggtttcagcgagtgtgtcggtgaggtcacccgttacctc
tccgcgtgtgatgaggtcaactccgaagcaaggacccgcctactcagccacctggccgcc
cgtgtctcccaaatgaacgccgtcaacttctacacgcctcactcgggcccgctgggacaa
actggcattaacgcccttcagggaccttgtaaaagcatctcaccgattggaccccccgct
gacaccatgaatctccacagcagctatcaggtggtcccaactcctgatggacattttgct
tttcttgttcccagcgcagctctcacacctttgagtgcacagagtggtcagtacatgtct
cccggtgcacctccactcacttcagactctgtgtggagaccctggtag
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