Syngnathus scovelli (Gulf pipefish): 125984432
Help
Entry
125984432 CDS
T08785
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125984432
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125984432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_EndoS
Ig_2
LRRNT
LRR_LRWD1
LRR_9
LRR_6
V-set
YqjK
Motif
Other DBs
NCBI-GeneID:
125984432
NCBI-ProteinID:
XP_049602228
LinkDB
All DBs
Position
17:7883806..7904794
Genome browser
AA seq
622 aa
AA seq
DB search
MIGSPGPGGRALVPRPKKWRAVLAASLVAVLTLTLPGSSQACPPRCECSAQLRSVSCQRR
RLTNIPEGIPTETQLLDLSRNRLRWVQAGDLAPYPRLEEVDLSENLIATLEPNSFASLPN
LKVLKLRSNQLKLVPMGAFAKLGNLTSLDLSENKIVILLDYTFQDLKSLKHLEVGDNELV
YISHKAFSGLLGLEDLTIARCNLTSISGQTLSYLRSLVTLRLHHLSIMALEDQNFRKLSN
LRALDINHWPYLEYISPLSFQGLDLHWLSITNTNITSVPSGSFKNMVHLTHLNLSYNPIT
ALEPWAFRDLLRLKELIMVSTGLMTVEPHALGGLRQLRVLNFSSNDLQTLEEGSFHSVNS
LETIRVDGNPLMCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVILSSFTDSALFDHFT
CQKPKIRNRKLQQVTAREGQPVNFLCRAEGEPTPAIIWISPQRRRITAKSSGRVTVLPSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRSQPMDAASAFFLNRSLYSGEFFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSF
RKSEPATGSSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcacctggccctggtgggcgtgccttagtgccacggccgaaaaagtggcgg
gcagtcctggctgcttctctggttgccgtcttaactttgacgctgccgggaagtagccag
gcctgtccgccgcgttgcgagtgctcggctcagctgaggtcggtgtcgtgtcagcggcgg
cggctcaccaatatccccgaaggaatccccaccgagacacagctcctggatctcagcagg
aaccgactccgatgggtgcaagcgggcgatctagcgccgtacccccggctggaggaagtg
gatcttagcgaaaacctcatcgccacattagaacccaattcctttgcgagtctgcccaat
ctgaaagtgttgaagttgaggagcaaccaattgaagttagtgcccatgggggcctttgcc
aaacttggcaatctgaccagcctggacctgagcgagaacaagattgtgattctgttggac
tacaccttccaagatcttaagagtttgaaacacctggaagtgggagacaatgaactggtt
tatatttcccacaaggcattctcagggctgctgggactggaagatctcaccatagcccgc
tgcaacctgacatccatctcaggccagacattgtcctatctccgcagcctggtcaccctc
cgcctccatcacctcagcatcatggctctggaagaccagaatttccgcaagctttcaaat
ttgagagctctggacatcaaccactggccatacctggagtacatctcacctcttagtttc
cagggtctggatctccactggctctccattaccaacaccaacatcacgtccgtcccatct
ggctccttcaaaaacatggtgcatctaacccacctcaacctttcttacaaccccatcaca
gcactggaaccttgggccttcagagatttgctgaggttgaaggagctcatcatggtcagc
acagggttgatgacggtggagccccatgctctcggaggtctccgtcagctccgggtcctg
aacttctcctcaaatgaccttcagactttggaagagggttccttccactctgtgaacagt
ctggagactatcagagtggacgggaaccctctcatgtgtgactgccgtctgttgtggatc
ctgcaaaggcgcaagaccctcaactttgacggcagagtaccggtgtgtgcagggcccgtg
gaggtgcaaggggtcatcctgagtagcttcaccgattctgcactctttgatcattttaca
tgccagaaacctaaaatacgcaaccgcaagcttcagcaggtgacagcacgagagggccag
ccggtgaatttcctttgccgtgccgaaggagaaccgacgccggctatcatctggatatcc
ccacagcgtcgacggatcacagctaagagctcgggccgcgtcaccgttctcccaagtggc
accttggagatccgttacgcccagcttactgacagcggaacgtatatctgcatcgccagt
aatgccggaggcaatgacacctactttgctacgctcacagttcgcagccagccaatggat
gcagcctcagccttttttctcaatcgctcgctctacagcggcgagttcttcaacgataca
aacctgaatagcactcgggtgttccttaaatttaccttggacttgaccaccatcttggtc
tccacggcaatgggttgcatcacttttctgggggtggtcctcttctgtttcctgctcttg
ttcgtgtggagccgaggacggggccaacgcaagaacaacttcacagtggagtactccttc
cgtaaatccgagcccgctacggggagctcttccggagggacccggaagtttaatatgaaa
atgatatga
DBGET
integrated database retrieval system
