Syngnathus scovelli (Gulf pipefish): 125984449
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Entry
125984449 CDS
T08785
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125984449 (ncstn)
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GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
125984449
NCBI-ProteinID:
XP_049602260
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Position
17:complement(3180590..3186152)
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AA seq
704 aa
AA seq
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MALLSSKWTVIFLLCICFIGVGCTAVEKKIYVHLNYTVPCVRLLNATHQIGCQSSLSGDV
GVLHVLESEENLDFVLQTGLNPPYMVILEHRLFTRSIMMRLNNGSNRVAGVAVVAPNTNP
TEGFSPHNTCPNENTGVYSESYDPALAHCSTMMWNALGNGLSYEEFDFPIFSMKDDNETR
LIRQCYLDHNRVVNGTAPKYPLCAMQLFSHMSAVTNTATCMRRNDINFSITPEKVCDPLG
DFNVWATTKPLNNTAKGHKMSESIVIAAARLDSRSFFFDVTPGAQSATSGFITLLAAAHA
LRNITQEVPPNRTILYAFFQGETFDYIGSSRMVYDMVNKEFAVDLDNVHSVLEVGQVGLR
AESQLWVHSDPVSRRNTSVDEEVKTLVENIQSAVTALNVSASEPNVSQPLPPSSFQRFLR
LRPIPGVVIVDHELSFSNRFYESMYDNAEYLRVSYPQNMTQEEQLQFVTDTAKALAEVAT
VVARALFKQAGGDQSQLSRINADAQIVSQMLYSFLIQSNNSWLQQIVPADVAGHLKDTAT
NFYVGVLLQASEPTYLVKHLLANLTGSVVNITQQNCQSQRMEEHDTESKHMYTYTWVQGA
MLPNATKRDGYCVRSTVHLSTALSPALDPNAQVEYTSTEYSTWTESRWKTIKGRVFLVAS
PELEMVTLGVGVGVLITSLLLTYVLSSKADILFSSQREPTNATY
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctttactgtcgagcaaatggactgttatttttctgctttgtatctgttttattggt
gttggctgtactgcagtagagaagaagatttatgtgcaccttaactacaccgtgccgtgt
gtgcggctcctcaacgccacgcatcagattggttgccagtcctcattgtccggggatgtc
ggggtgctccatgtcttggagtcagaggaaaacttggactttgtgctgcagacaggtctc
aatcctccttatatggttatcctggaacaccgtctcttcaccagatccatcatgatgagg
ctaaacaatggctccaatagggtggcgggcgtcgctgttgtggcgccaaacacaaaccca
acagagggcttctctccgcacaacacgtgtcccaatgaaaacacgggcgtgtattcggaa
agctacgacccggctttggctcactgtagcaccatgatgtggaatgccctgggcaatggc
ctgtcctatgaggagtttgacttccccatcttctccatgaaggatgacaatgagacgcgc
ctcatccgacagtgctacctcgatcataaccgcgtggtgaacggcaccgcccccaagtac
ccgctgtgtgccatgcagctcttctcacacatgtcggccgtcaccaacaccgccacctgc
atgagaaggaatgacatcaacttcagcatcacaccagagaaagtttgtgacccactgggc
gacttcaacgtttgggccaccaccaaaccgctcaacaatacggccaaaggacacaaaatg
tcagagagcattgttatcgcagccgctcggctggacagccgatcgttcttcttcgacgtt
actcccggagcacagagcgccacctcgggcttcatcaccttgctggcggctgcgcacgct
ttgcgcaacatcacccaagaggtgccgcccaaccgcaccatcctctacgccttcttccag
ggggaaacctttgattacatcggcagttccaggatggtgtacgacatggtgaacaaggaa
tttgcggtggacttggataacgttcactctgtgctggaggtcggacaggtgggcctgcgt
gccgaatcccaactatgggtccactctgatcccgtctcacgcaggaacaccagcgtagac
gaggaggtgaagacgctggtggagaacatccagtcggccgtgacggccttaaacgtctcg
gcgagcgagcccaacgtgtcgcagccgctgccaccctcgtccttccagcgattcttgcga
ctgcggcccatccccggcgtggtcatagtggaccacgagttgtctttcagcaacaggttc
tatgagagcatgtacgataacgccgaatacctacgcgtgtcatacccccagaacatgacc
caagaggagcagctgcaatttgtcacagacacggccaaggctctggccgaggtggccacc
gtggtcgcccgcgctttgttcaagcaggcgggaggagatcagtcacaactgagcagaatc
aacgctgatgcccagatagtgtctcaaatgctttactcattcctcatccagtcaaataac
agctggctgcagcagatagttcccgctgacgtagcaggccacctgaaggacacagccaca
aacttctacgtgggggtgttgctgcaagccagtgagcccacgtacctggtgaagcacctg
ctggccaacctgactggcagcgtggtcaacatcacgcagcagaactgccaaagccagcgg
atggaagagcacgatacagagagcaaacatatgtacacgtacacgtgggttcaaggcgca
atgttgcccaacgccaccaagagggacggctactgtgtccgctctacggtgcacctctcc
acggcgctgtcgcccgccttggaccccaacgcacaggtggagtacacctccacggagtac
tccacctggacagagtcccgctggaagacaatcaagggtcgtgttttcctggtggccagt
cccgagctggagatggtgactctgggtgtgggcgtgggtgtgctgatcacctccctcctg
ctcacctatgtgctcagctccaaggcggacatcctattcagctcacagagggagcccact
aatgccacttactga
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