Syngnathus scovelli (Gulf pipefish): 125984453
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Entry
125984453 CDS
T08785
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125984453 (chd7)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125984453 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_CHD1_Hrp3
DEAD
Chromo_MIT1
HDA2-3
Motif
Other DBs
NCBI-GeneID:
125984453
NCBI-ProteinID:
XP_049602265
LinkDB
All DBs
Position
17:9753381..9793823
Genome browser
AA seq
3269 aa
AA seq
DB search
MADPGMLSLFGDDAGLFSDGLDGLGDCFPQQPTPGQSNTLPRQTNPPLNHEHQGNRAYNQ
GMVLGTGAAQPKLGQMYDHSTYAGYEQAGAPGGRMMSQNGPSPGPPNVNATMNGMASHYH
NTANSSNAHHGYPGETGGGAGGAGVWGQPHQSRSPYQQAASQAGSGPNQIGAFQLSQSNY
GGMQGQQPTPNAARITQHYPQQSLAHQATQEPSHYMGHVGMVGGQMRHPQPQSQGYPNVS
HPPRFPHSPSRQPPHPHQHQQGMGGFGAGQYPGYQAQYGAMGSGIGQGANATVSSNASPA
MGPGQLGQRFNQGSGPASGQPGQRYPSGPSHQTHSVPLPPQPTGQQGQPMHPLIHSQAPN
QPQSHLPPPAQGSYPSPSSMSPMRVLGTPTPPPPQVRPPSAGLAVPTEVTGYTALQSPPN
SIAHPQRPLQTSLSAPHQHQQTHNITPNAGQMYSGMGQQRPQIGPNRPLLQPQQGPLEAP
VSQGDPHLLHSQQQASRSGQPMQPSPLGFQGPSVSLPMNHGLLPPNQNVQTQHTHLSPHP
LQSTPPPPNQATHHWAPPPSASHPLSSPPTTPQKVPNLQHSQLDPSADASVMVPDRLAVS
TGDTRQPVSSEQPSDQETKPKKKKKKKTKVDDGEEEGKKSMTKLKEVIKSEFPLIGCEQG
TGAEIGDGGSQPVEKKKRKKKPKDKAEGTEAKEPKTPKMPKTPKTPKTPKEPKEKKVKNS
TPKAKISKKSSSKKAESEDGAIAAKKDSKRKRQSSISEDVEVKSPPPSPTEEEDEDGIQK
RRSSRQVKRKRYTEDLEFRISDDDDTGDDSPAPKSPSTQLQDVADADGPVVEKIMGVRTT
KKQLESREEVEVEEFYVKFKGFSYLHCRWAELEELEKDKRIQQKVKRFKAKQLLNTFITE
MDDEPFNPDYVEVDRVLDISESTDENGERVTLYLVKWCSLPYEDSTWELKADIDQSKIEE
YERIAARTPNTNKVDRPLAAEWTKLEGSRDYRNGNALREYQLEGLNWLTFNWYNSRNCIL
ADEMGLGKTIQSITFLYEIYLKGIQGPFLVIAPLSTIPNWEREFRTWTELNAVVYHGSQA
SRRTIQAYEMYYRDTQGKVIKGAYRFDAVITTFEMILADCPELRGIPWRCVVIDEAHRLK
NRNCKLLEGLKLMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSELTFMTEFGDLKT
EEQVQNLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSK
GGAGGGGGGGSGSGGGGGGVPNLLNTMMELRKCCNHPYLINGAEEKIIEEFRDSHSGMDM
PDMPLQAMVHAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERID
GRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQ
ARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENANSGVQQLSK
KEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIESEGKGSTFAKASFVAP
GNRTDISLEDPDFWQKWAKKAELDLDAINGRNTLVIDTPRVRKQTRHYSSVKEDEMMEFS
ELESEEDEPSRPLSKPRRPQDKVQGYPRSECFRVEKNLLVYGWGRWSDILAHGRFKRPLK
EADVETICRALLAYCLLHYRGDENIKSFIWDLITPSEDGTTKTLSNHSGLSTPVPRGRKG
KKGKPTAPAPQTPRADWLASCNPDHLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGD
QAERILDGADSSELDFWIPQPFHAEVPTDWWDSEADKSLLIGVFKHGYEKYNSMRADPTL
CFLERVGMPDAKAIAAEQRGNDMMADGVEGEDEDPEYKPLRMPFKDEMDDFTNSPLDDTG
DGEAEGKSDENGQGVPSMGGAAGSNERLYWPAASALTARLRRLITAYQRSNRREQLRQEA
LSRPDGRRRRRRDFLPTITMVTDATGGGAAYIQDPTTVFIAEGTPYLTKGSAYFAKGGQF
ITDESPVMTTSTLMTDGAMYYKERRQRWTRREEADFYRVVSTFGVVFDTQSQKFDWTQFR
AFARLDKKTDESLEKYYYSFIAMCKRVCRMQVKTDTELPDPTLIIDPITEERASRTLYRI
ELLRRIREQVLPHPLLSERLKLCQPSQDLPEWWECGRHDRDLLLGASKHGVSRTDYHIQN
DPTLSFLEAHQRVTSQRGTLLGMGELCKSGIGTAESSPSALLTPAELASVAASAEITISS
AKVAAEETQVKTEDEDAKPEVKIEAEKEDASDDMETGTLEKMEENEAAVKVENAAATASP
VSDVKEETQPTSEKETSEENTQNVSQETEQDKEIIEDETSAAPVETAGDQIISKVSEDLE
AQTCHNATEEEDGVEREDSKSPKSPDADKSPEEEERMDEDDKSEKSSQAEASAVSEQKNF
DEESIASLSTSVRDETRDGFCPDDLTETSALQALQDRTYAFTLWPKDRVMINRMDNICEA
VLKGKWPVNRRHIFDFPSNLMPGHGSTMPAAAVATASESPLQRRNLGELTMSGIHTPYGG
MEDKTLSPHVHDDPLGLTAPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESHATLESQ
SQAMDLTKGIHHQHKSSPSLAGFPSALVTNPSLKAQMELLQQAPPSGHRANGSLEADLPM
MRRRRGRRKNVEGMELLFMGNKRAVGDDADGTKVSGAEGGQDPARAHRPIAVSEQSPSGR
SLASGSMEEEEATVSNKELGEWLRQHPTYTMDMSGFTPKNEELLMSQFSKPKQKRHRCRN
PNKIDINTLTGDERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEFSIASDWTDIVKQS
GFLPEAMFDRLLTGPVIREEGVRRRGRRPKSEIAKAAAAAQAAAAAQAAQASLATAASSA
GGINPLLLNSLFGGMDLSSLQSLQSLQLAAGLMAFPTTTDPKQAAASAAAASMLPLMLPG
MGGLPNMAAAIPNMFSLGGLFGANLATATAASNAAVASASGNTNGTVEGDKAEGEEVKRK
TKEKDNDGADGDEGGDKEDEEEALGVEGGRLVRKVKIDKEDEEGGEKMEKSQSNRSATPQ
MPATDSPADSSINGEAAALLAAAGMSANSLAFNPFLLSTMAPGLLYPSMFLPPGLGGLGL
PGFPAASTLAELQSAAGAPEANTAAAKPSRDDDKAEGPKMADEENEDEEARRGESDLAEE
SAAAKETRSEAEESLMEDGGMIGDEEDDD
NT seq
9810 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagtttatttggggatgatgcagggctgttctcagatgga
ttggatggtttaggagactgttttcctcagcagccaacgccgggccaatccaacactcta
ccccggcagactaatccccccctcaaccacgaacaccagggaaacagggcgtacaaccag
gggatggtccttggtactggagcagcacagcctaaattgggccaaatgtacgaccacagc
acctacgcaggctatgaacaggccggtgctcccggaggaagaatgatgtcacagaatggt
cctagcccggggccaccaaatgtcaatgcaactatgaatggcatggcttcccactatcat
aatactgctaactcaagcaacgcccatcacggttacccaggtgagactgggggtggagcg
ggtggagctggcgtttgggggcaaccgcatcaaagtagatcaccataccagcaggcagca
tcgcaagcggggagtggccccaaccagataggagccttccaattgtctcaaagcaactat
ggtgggatgcaaggccaacaacccacacccaacgcagcacgcataactcaacattaccca
caacagagcttggctcaccaagctactcaagaaccgtctcactacatggggcatgttgga
atggtggggggtcaaatgagacacccgcagccgcaaagccaaggttaccccaatgtgagc
cacccacctagattcccacattctccctcacgacagcctccgcatcctcatcaacatcag
caaggtatgggcggttttggggctggacaataccctggttatcaagcccagtatggtgcc
atgggttctgggattggccagggtgcaaacgctactgtcagtagcaacgcaagccccgct
atgggacctgggcagcttggccaaaggtttaaccagggatcaggcccagcctctgggcag
ccggggcagcgatacccttccgggccgtcccaccagacacattcagtcccactgccacca
cagccgacagggcaacagggccagcctatgcacccccttatccactcccaggccccaaat
caaccccagtcccaccttccacccccagctcagggatcctacccttctccctcatcaatg
tcccccatgcgggttttgggaacaccaaccccccctcctccacaggtcaggccccctagt
gcaggactagcagttcccacagaggttacagggtacacggccctgcagtccccaccaaat
tctatcgcacatcctcagagacctctccaaacgtcattgtctgctccacaccaacaccag
cagacccacaatataacccccaatgcagggcagatgtattctggcatgggacaacagcgt
ccccaaattggcccaaatcggcctctgctccagccacaacaagggcctcttgaagcacca
gttagccaaggagatccacatctcctccattcccagcaacaagcctctagaagcggccag
cccatgcagccttctcctctcggtttccagggtccatctgtcagtctgcctatgaaccac
ggtttattgccacccaaccaaaatgttcagacgcagcacactcacctgtccccccaccct
ttacagagcacgccccctccccccaaccaggccacccaccattgggcaccgccaccttct
gcctcccacccactttcctcaccccccaccaccccacagaaagtgcctaatttacagcat
tcccagttggacccatctgctgatgcttcagtaatggttcctgatagactggctgtcagc
actggtgacactagacagcctgtcagctcagagcagcccagtgaccaggaaactaagcca
aaaaagaagaagaaaaagaaaacaaaagtagacgatggagaagaagaaggaaaaaagtcc
atgacaaaattaaaggaagtcatcaagtcagagtttcctttaatagggtgtgagcagggt
actggcgcagaaattggagatggaggttcccaacctgttgagaagaaaaagaggaaaaag
aaaccaaaggataaggcagagggcactgaggccaaagagcctaagacccccaaaatgcct
aaaacacccaagacccccaagactcccaaagaacccaaggagaagaaagttaagaactcc
acacccaaggccaagatctccaaaaagtccagcagtaagaaggcggagtccgaagatggc
gccattgctgccaagaaggattccaagaggaagcgacagtcatcaatcagtgaagatgtg
gaggtgaagtctccgcctccctcgcccacagaagaggaggatgaggatggtattcagaag
cggcgctccagccgacaagtgaagaggaagcggtatacagaggacctggagttccgaatc
tctgatgacgatgacactggagatgattcaccagcaccaaagtccccatcgacacagctg
caggatgtagctgatgctgatggaccagttgtggagaagatcatgggtgtgcgtaccacc
aagaaacagctggagtcacgggaagaagtggaagtggaggagttctatgtcaagttcaag
ggcttttcttacctccattgccgttgggcagagttagaagaactagagaaagacaagaga
atacagcagaaggtcaaaaggttcaaggccaagcaattacttaacacctttatcaccgag
atggatgacgagcctttcaaccccgactatgtggaggtagatcgcgtcctggacatttca
gagagcacagatgaaaacggagagagggtgaccttatatttggtgaaatggtgcagtcta
ccctatgaagactccacctgggaactcaaggcggatatcgaccaatccaagatagaagaa
tacgaacgtattgctgcacgcacacctaacactaacaaagtggatcggcctttggcggct
gaatggacaaaattagaagggtcaagagattacaggaacggcaacgcactcagggaatac
caactagaaggtctcaactggcttaccttcaactggtacaactcacgtaactgtatactg
gctgatgagatgggtctggggaaaactatccagtccattacattcctctacgaaatttac
ctgaagggcattcaggggccattcctggttattgccccactctccacaattcctaactgg
gagagagagttcaggacttggactgagcttaatgctgtggtctaccatggcagccaggct
agccgaagaactatccaggcctatgagatgtactacagagatacacagggtaaagtaata
aagggagcgtatcggtttgacgccgttataaccacctttgagatgattctggccgactgt
ccagagcttcgcggcatcccgtggcgctgtgtggtcatagacgaagcccatcggctgaaa
aaccgaaactgcaaactacttgaaggactcaagttgatggacatggaacacaaagttctg
ttgacagggactccgcttcaaaacacagtggaggagctctttagcttgcttaactttctg
gagccagaacgtttcccatctgaactgacattcatgactgaatttggagaccttaagact
gaagaacaggttcagaatctacaaggaattctcaagcccatgatgttgagaagactaaag
gaggatgtcgaaaagaatctggcacctaaggaggagaccatcattgaggtggaactcacc
aacatccagaagaaatactatcgagcaattctagagaagaacttctcgttcttgtcaaaa
ggaggtgcgggaggaggaggtggtggtggcagtggtagcggaggaggaggtggtggtgtc
cctaatctcctcaacaccatgatggagctgaggaaatgttgtaaccatccttatctcatt
aatggagcagaagagaagatcattgaggagtttagggactcccacagtggaatggacatg
ccagatatgcccctccaagcgatggtccatgctgctggcaaactggtgctcattgacaaa
ctattgcccaaactgaaggccggtggtcacagagtcctggttttcagtcagatggttcgc
tgcctggacattttggaagattatctcatccaaaaacgttatccctatgagcgtattgat
ggcagagttcgtggtaatctgcggcaggcagccatagaccgcttctccagaccagattct
gaccgttttgtcttcctgctgtgtacaagagctggtggacttggcattaacctgactgca
gcagatacttgcattatttttgattctgactggaaccctcaaaatgacttgcaggcccag
gcgagatgtcatcgtatcggccagtccaaagctgtgaaaatctaccggctaatcaccaga
aacagttacgagcgagagatgtttgataaggccagtcttaaactgggtcttgacaaggca
gtcctccagagcatgagtgggcgcgagaatgccaacagtggggttcagcaattgtccaag
aaggagattgaagacctactgagaaagggagcatatggagcactcatggatgaggaggat
gaaggctccaaattctgtgaggaagacattgaccagatccttcagaggcggacccatacc
atcaccatcgagtctgagggcaaaggttctacttttgccaaggccagttttgttgctccc
ggtaatagaacagacatttctctggaggatcccgacttttggcagaaatgggccaagaag
gcagaactggacctggatgctatcaatggacggaacacgctggtgatcgacacaccaaga
gtaagaaagcagacgcgtcactatagcagtgtgaaagaggacgagatgatggagttttca
gagctggagagtgaagaggacgaacccagcagacccttgtccaaaccacgacgaccccaa
gacaaagtccagggctaccctcgatctgagtgcttcagagtagagaagaacctgctagtc
tatggctggggcagatggagtgacatcctggctcatggccgcttcaagcgccccctgaag
gaggccgatgtggagacgatctgccgagcgctcctagcatactgtctattgcattaccgt
ggcgacgaaaacatcaaaagcttcatatgggatctgatcaccccaagtgaagatggaaca
accaaaacattgagcaaccactctggactgtcaacaccagtaccacgaggcagaaagggc
aaaaaagggaaacccacagcaccagcccctcagacaccaagagcggattggcttgccagc
tgcaatcctgatcatctactgcaagaggatagctacaagaggcacttgaagcatcactgt
aacaaggtgttgctgagggtgagaatgctctattatctgagacaagaagtcattggagat
caggcagaacgcattctggatggagctgactccagcgagttggatttctggattcctcag
ccgttccatgcagaggtccccacagactggtgggacagtgaagcagacaaatccctgctc
ataggtgtcttcaaacatggttatgaaaagtataactccatgagagccgaccccactctg
tgttttttggagagggtgggtatgcctgacgccaaggctattgccgctgagcagaggggc
aacgatatgatggcagatggcgtcgaaggtgaggatgaagatccagaatacaagcctctt
cggatgccttttaaagatgaaatggatgatttcaccaactctcctctcgatgacaccggg
gatggagaagctgagggtaaatctgatgaaaatggccaaggtgtgccttccatgggcggg
gctgcaggttccaacgagcgactctattggccggccgcgtcggctctgacagcccgtcta
cgccgcctcatcactgcctaccagcgttccaatcgcagagagcagcttcgccaggaggcc
ctcagcaggcccgacgggcgaagaagacgacgccgggacttcttaccaaccattacaatg
gttacagatgcaacaggaggaggagcagcctacatccaagatccaacaacagtgttcatc
gctgaaggaaccccgtacctaactaaaggaagtgcttattttgctaaagggggacaattc
ataacagatgagtcaccagtcatgaccacaagcaccttgatgactgatggagccatgtac
tataaggaaagacggcaaagatggactcgtcgtgaggaggctgacttttaccgtgtcgtg
tccacgtttggagtagtctttgacacccagagtcagaaattcgactggacccaatttaga
gcctttgcccgactggacaaaaagacagacgaaagcttggagaaatattactattccttc
attgcaatgtgcaaacgtgtctgtcgcatgcaggtcaaaaccgacacagaactccccgac
cccacgctgatcatcgaccccatcacagaggaacgtgcttctcgtacattgtatcgtatt
gaattactccgccgcatcagagagcaagttctccctcatccgctactgtcggaacgcctc
aaactctgtcagccttcccaagaccttccagagtggtgggagtgtggccgccatgacagg
gacctcctcctcggagcctcaaagcacggtgtgagtcgaacggattatcacatccaaaat
gatcctaccttgtcatttctggaggcacaccagcgcgttactagccagcgagggactctt
ctcggcatgggagaactctgcaaaagtgggataggaacagcagagagcagcccttcagct
ctcctcacgcctgcagagctggcgagtgttgcagcttctgctgaaataaccattagtagt
gctaaagtggcagcagaggaaacccaggtgaaaactgaggatgaagatgccaagcctgaa
gttaaaatagaagctgagaaagaggatgccagtgatgacatggagactggaactcttgaa
aaaatggaggaaaacgaggcagctgttaaagttgagaacgcggcggccacagcttcacca
gtgtcagatgttaaagaagagacgcaacccacctcagaaaaagagaccagcgaggagaat
actcaaaatgtttctcaggaaaccgaacaagacaaagaaataattgaagacgagacaagc
gcggctcccgttgagactgccggggaccagataatatcaaaggtctcggaagatcttgaa
gcacaaacatgtcataatgctacagaggaggaagatggagtggagagggaagacagcaag
tctccaaagtcacctgatgccgacaaaagcccggaagaggaggagaggatggatgaagat
gacaaatccgagaaatcatcgcaggctgaagcgagtgctgtttcggagcagaagaacttt
gacgaggagagcattgcatctttgagcacatctgttcgagatgaaaccagagatggcttt
tgccctgatgacctgacggaaacttcggccttgcaggccttgcaggacagaacgtatgcc
ttcacgctctggcctaaggatcgagtgatgattaacaggatggacaacatctgcgaggct
gtcctgaagggcaagtggcctgtcaaccgacggcacatctttgactttcctagcaacctc
atgccaggtcatggctccacgatgcccgcagcagcagtagccacggcaagcgagagcccg
ctgcagaggcgaaatttgggcgagctgacaatgagcgggatccacaccccttatggcggg
atggaggataaaacgctttcaccgcatgttcatgatgatcctctgggtctaacggcgcct
cgacaaaggaggagaagaaggaggaagatcgagattgaggcagaaagagcagccaagagg
cgcaacctgatggagatggttgctcaactgagagagagccacgcaaccctggagtcccag
agtcaggctatggatctcaccaagggtatacaccatcaacacaagagctctccctcattg
gctggcttccccagcgctctggtgaccaacccctccctaaaggcccaaatggagctgctg
cagcaagccccgccttccggacaccgagccaacggttcactggaagctgacctgccgatg
atgaggaggaggcgggggcgcaggaaaaatgtcgagggcatggagctgctctttatgggc
aacaaaagagctgtaggggatgatgctgatggtaccaaggtttcaggtgcagaaggcggc
caggatcctgcccgtgcgcacagacccatagcagtgtcagaacagagccccagtggaaga
tcgcttgcgtctggtagcatggaggaagaggaggcaaccgtttccaacaaagagctcggc
gagtggctgaggcagcaccctacgtacaccatggacatgtctggatttacaccaaagaat
gaagagttactgatgtctcagttctcaaagcccaagcaaaagcgtcatcgctgtcgaaac
cccaacaagattgacatcaacactctgacaggagatgagcgagtgcctgtggtcaaccga
cggaatgggcgcaagatgggtggggccatggctcccccaatgaaagaacttccaagatgg
ctattggaaaacccggaattttcaattgcatctgattggacagatattgtcaaacagtcg
ggttttctcccagaagccatgtttgaccggctgctgacgggtcctgtcattcgggaagag
ggagtccgacgtcggggacgacgacccaaatctgagatcgccaaagcggccgccgccgcc
caggcagcagcggctgcgcaggctgcccaagcttcgttggccaccgccgcttcgtcggct
ggaggcatcaaccctctactgctgaacagcctcttcggaggaatggatctgtcctccctc
cagagcctccagtccctccagttggccgccggtcttatggcctttcccaccaccactgac
cccaagcaggccgctgccagtgccgccgccgcctccatgctacccctcatgcttcccggc
atggggggcttgcccaacatggcggcggcgatcccaaatatgttcagcctcggggggctc
tttggtgcaaacttggcgacggccaccgctgcttccaacgccgctgtggcctccgcatca
gggaacaccaatggcacggtggaaggagataaggcagaaggtgaggaagttaaacggaag
acaaaagaaaaggacaacgatggggcggatggtgatgagggtggagacaaagaggatgag
gaggaagctcttggtgttgaaggtggacgtcttgtcagaaaggtgaaaattgacaaagag
gatgaggaaggtggagagaagatggagaaatcccaaagcaataggagtgcaacccctcag
atgccagccacagattccccggctgattcctccatcaacggcgaagccgccgcactgctc
gccgccgccggcatgtcggccaattctctggcgttcaaccctttcctcctctccaccatg
gcccctggcctcctctacccctcaatgttcctacctcctggcctcgggggtctcggcctt
cccggcttccccgccgcctccaccctggctgagcttcagagcgccgcaggagcgccagag
gccaacaccgcggccgcaaagccttcaagagacgacgacaaggcagaggggccaaaaatg
gcggacgaggagaatgaggatgaggaggccagaaggggagagagtgacttggctgaggag
agcgcagccgcaaaggagaccagaagtgaagccgaggaatcgcttatggaggatggaggg
atgatcggagatgaggaagacgacgattag
DBGET
integrated database retrieval system
