Syngnathus scovelli (Gulf pipefish): 125984459
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Entry
125984459 CDS
T08785
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04020
Calcium signaling pathway
sscv04148
Efferocytosis
sscv04218
Cellular senescence
sscv04310
Wnt signaling pathway
sscv04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125984459 (nfatc4)
04020 Calcium signaling pathway
125984459 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125984459 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
125984459 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125984459 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125984459 (nfatc4)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
125984459 (nfatc4)
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GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
125984459
NCBI-ProteinID:
XP_049602283
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All DBs
Position
17:complement(9722991..9729642)
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AA seq
869 aa
AA seq
DB search
MGAAPGSGWEEGEFDFKLVFEEDTPRSEEEGSGSVEPADSSSSVDGHSATSNAERSRVSI
PSPPSSGNQRAGMHSPPPRRVPAREFSGTYESLPARSVQVSESRVVECPSIQITTISPED
ESAPNLSWDIESGSRWDRERLYLPLLDPFTYRDRCPGSLSPSPASSPSSRGWLSPASSCD
SLLVEEEELSESTLHFGLTPYSRPTSPGGKKRRNSPLASPCTSRRGSYSEELQGGVLEGR
DPSLLSQDSPGSFELSVPQKTRKTSMEQLSPRDQEQVSGQQQPETLQSRKEPSSMSMDYL
SVPPALAWGRTRANSHSPLFRLNALPPLDWPLPSQFEQYELRIEVQPRPHHRAHYETEGS
RGAVKATPTGHPVVKLFGYNERKPLSLQVFVGTADDRSIRPHPFYQIHRVTGKMVGTTSH
ENIQAGTKVLDIPLNPENHMTALIDCAGILKLRNSDIELRKGETDVGRKNTRVRLVFRTQ
IPLAPPALPPGRVLALQVASLPIECSQRSAQELPVIESISLTSCSVEGGEELLLSGTNFM
AISRVVFMQRSTDGKLQWEEEAHVDRDNSNECLLCMRVPPYCDLSITRPVSVNLYVSNGK
RKRSSTHSFKYVPSMFKEEDPLMSRPQALDAGVVCSSVGGQSRMNLRCDPMAEEQTGLGF
NLSPYPSTYSPPCTSLAYQEEYGAETVTEEPRGMGPTVSEHHPSFENLELGFTELLPSLY
LRGSQPPSPSPWLDSPYLSSSPSPSHSSSLSPFPAGSPISSSPLPPVPTPPYSQYSAYPQ
EMCPSPPTSQSAYQDLCSVPYSHYESWDPSVRVLRMAHEDERDAKVQECPLEFPSSTDMH
PITFEEVSEYIGQDLQSYQVTSHTEEQPH
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagcgccgggctccggctgggaggagggcgagttcgacttcaagctggtgttc
gaggaggacacgccgcggtcggaggaggagggttctggctccgtggagccggctgacagc
agcagcagtgtggacggccacagtgccacctctaatgcggagcgctccagagtcagtatc
cccagcccgccatcctcaggaaatcagcgggccgggatgcattccccgcctccgcggaga
gtgccggccagagaattcagcgggacctatgaaagcctgccggcgcgctctgttcaggtt
tcagagtcccgcgtggtggagtgtcccagcatccagatcaccaccatctcgcctgaggat
gaatcagcacccaatctttcctgggacatagaaagcggcagcagatgggaccgggagcgc
ctctatctccccctgctggaccccttcacctatcgagacaggtgccccggctcgctcagc
cccagccctgcctctagcccctcgtcccggggctggttaagtccggcctccagctgcgac
tcgctgctggtagaagaagaggagctcagcgagtctacgctccatttcgggctcacacca
tactcccggccgacttcacccggaggaaagaagcggaggaactcacccctcgcatcccct
tgcacctcccgcaggggaagttactctgaggagttgcaggggggtgtcctagaagggaga
gaccccagccttctgtcacaagactcgcccggcagctttgagctcagtgttccacagaaa
acgaggaagacatctatggagcagttgtctccaagggatcaggagcaggtctctgggcaa
cagcagccagagaccctccagagcaggaaagagccctcctcaatgagtatggactatctc
tctgtgccccctgctctggcttggggccggaccagagccaattcccacagtcctctcttc
aggttaaatgccctgccaccactcgactggcccctgccctcccagtttgagcagtacgag
ctgcgcattgaggtgcaaccccggccccaccaccgagcccactatgagactgaggggagc
agaggagctgtcaaggccactccaaccggacatccggttgtcaagttgttcggatacaat
gagaggaaaccactttctctccaggttttcgtgggaactgcggacgatcgctctatcagg
ccgcaccctttctatcagatacacagggtgacgggaaaaatggtgggcaccaccagtcat
gaaaacatccaggcaggaacaaaagtgctagacatccccctcaaccctgagaaccacatg
actgcactcattgactgtgctgggatcctcaagctgaggaactcggacattgaactgagg
aagggcgaaactgacgtcgggaggaagaacacacgtgttcgcttggtcttccgcacccaa
attcctctggcaccacctgctcttccccctggccgggttctggccctacaggtggcctca
ctgcccatcgaatgctcccagcggtcagcacaagagttgcctgtcatcgagtcaatcagc
ctcacttcctgttcagtagagggtggcgaggagctcctactgagtggcaccaatttcatg
gctatctcgagagttgttttcatgcagagaagcacagatggtaaacttcaatgggaagag
gaagcccacgtagaccgtgacaacagcaatgagtgtttgctgtgcatgagggtgccgccc
tactgcgacctgtctatcactcgtccagtgtcagtcaatctttacgtctccaatgggaag
aggaaaaggagcagcactcattcctttaaatatgtccccagcatgttcaaggaagaggac
ccactgatgtcccggcctcaggcactggatgcaggggtggtgtgttcttcagtggggggt
cagtctagaatgaacctgaggtgcgaccccatggccgaagagcagacagggctgggcttc
aacttgtccccttacccatccacctactcccctccgtgcactagcctggcttaccaggag
gagtacggcgccgagactgtgaccgaggagcctcgtgggatgggccccactgtctctgag
catcaccccagctttgagaacctggagctgggttttactgagctcctcccgtctttgtac
ctccgtggttcacagccaccgtccccttccccctggcttgactcaccctacctgtcctcc
tcaccctctccctcccactcctcctcccttagccctttcccggccggcagcccaatatcc
tcatcccctctgcctcctgttcccaccccaccatactcccagtactctgcctatcctcag
gagatgtgtccctcccctccaacaagccagagcgcctaccaggacctatgctcagtgcct
tactcccactatgagagctgggacccctcagtaagggttcttaggatggctcacgaggat
gagagggatgcaaaggttcaggagtgtcctctggagttcccaagctccaccgacatgcat
cccatcacatttgaggaagtgtcggagtacatcggacaggacttgcagtcttatcaggtc
acctcgcacacggaggagcaaccacactga
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