Syngnathus scovelli (Gulf pipefish): 125984520
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Entry
125984520 CDS
T08785
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125984520 (gigyf2)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125984520 (gigyf2)
Surveillance factors
Other surveillance factors
125984520 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
125984520
NCBI-ProteinID:
XP_049602402
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All DBs
Position
17:complement(3713054..3723797)
Genome browser
AA seq
1335 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGASSGGGGGGSSSNNAVSSPPLSPVLPKYKLADYRYGREEM
LALYVKDNKIPIDLHDKEFLPILQEEPFPPLALVSFTEEEQRNFSLSVNSAAVFRRGSGA
VVSAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGFGRGGREMHRSQSWEERGDRRFEKPGR
KDADVAPGHFQLNHAASPMTNFAVRNNYEDAGLGLSRKHDFTRSESENWRTSRDDQNDVP
RSAAWHPEQRRRIPFDSREDERTYRRQRSGSGSLDDDRDALPEWCLEDADEEAGTFDSSG
AFLSLKKASKEPILEEAELDFKPLEECEEALEEEDSQPKETKETEIEAKQNSDRKVFTGV
SIMSEETPPVPPPAVGTIPEAQSASPGHLNLTEEPERQPPLERPPEPCKVAQHVPLSNSM
SLPNSRISATLTEVRMQSSSMQTPAEVLVAMNNPLPFSSSVLAPISRPAAVSHDTDEDEG
LKHFEQEAEKMVAYLQDGVADDDRLAAKAPEKPKAAGLPLTHKTALKWFYKDPQGEIQGP
FNNQEMAEWFQAGYFTMSLLVKRGCDDIFQALGEMMKIWGRVPFTPGPAPPPLQGDADQE
RLKRQQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAAVLSSAPLQQQQQHQQQLNTLQ
QQYQALKIRTSESLLPPVTRSLSVPDSGSVWEMQNPSSQASCTPNLPTATSSTWDGSSVW
DLPIDSVAKAPTIEQMQQLEKSKAAKSQPGFNYCGRTLKPHSLKHQLELERREAELRAKR
EEEERKRLEEALRARQEEERKRLEEEELARQKQEDALRRQREQEEAQRRKKEQEERLAQE
EALRRLEERRREEEERKKREDFLRKQEEERRKQEELEALRRREEEKRAEEEAAAAAAAAA
AAAALAQQQQEEQKRREQEAQRQQELQRQRQQQQEALRRLQQQQQLAQMKLPLSSKWGHQ
SANASNKNQNTLSLAEIQKLEEERERQALEEQQRQQQELLKLQQHQALQQAQQAQAKLSG
WGHAAKQPPVTKSLLEIQREEAQQMKQKKAPQQQQQNHILAQPTRPQNKTTSLSNSVWGS
VNITPCSNWAADSSSIWGDTHNSNMGFWDEAVKEAVQQPPPTKKGNAQKNKGNANLSNFT
SGRANKKVEEEEKLLRLFQGVNKSQQDGFMQWCERTLHSLNTANNLDVPTFASFLKEVDS
PYEVHDYVKAYLGDTPEAKDFAKQFLERRAKQNANQQKTSPPPQQKQGQALKQQQDSVWG
GTGSSTLYLGNHTSGQHKQHHQQPPPPQQRFETVTSGKKKKKQKMVRADPSLLGFSVNAS
SERLNMGEIETVEDF
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggccgagacccagacacttaactttggaccagaatggctccgtgccctttctggaggt
gcaagcagtggcggcggtggcggaggaagcagcagcaacaacgccgttagctcgccacct
ctctcgcctgtattgccaaagtacaagcttgcagactatcgttacggaagagaggaaatg
ttagcactttatgtcaaagacaacaagatccctatagacttgcatgataaggagttcctg
cccatattgcaagaggaacctttcccgcctctggcacttgtttcttttacagaggaagaa
cagagaaatttttccttgtctgtaaacagcgctgccgtattccgacgaggaagcggcgca
gtagtgagtgcgcctcgaggccgaagtacctcaaggggtagaggtcgaggaagaggagac
ggagggttttaccaaagaagttttgatgatgtggaaggttttggccgtgggggcagggag
atgcatcgctcccagagctgggaggaaaggggcgatagaagatttgaaaagccaggccgg
aaagacgcggatgtggcgccaggacatttccagctgaatcacgcagcttccccaatgacg
aatttcgcagtgcgaaacaactacgaggatgccgggctgggcctgtcgaggaaacacgac
ttcacgcgctcagagagcgagaattggcgtacctctcgtgacgatcagaacgatgtacct
cggagcgcggcgtggcatccggagcagcggcgccgcattccgtttgactcgcgagaagac
gaacgcacctacaggaggcagcgttcgggcagcggcagcttggacgacgacagggacgct
ctgcccgagtggtgcctggaggacgcggacgaagaggcgggcaccttcgactcgtcgggg
gcctttctctcactcaagaaagcctccaaagagcccatcctggaggaggccgagttggat
tttaaacccttggaagagtgtgaggaggccctagaggaggaagacagtcagcccaaggag
accaaagaaacagaaatagaagccaagcaaaattctgaccgaaaagtattcacgggggtg
agcataatgtcagaggagaccccacctgttcccccgcccgccgttgggacaatccccgag
gcccagtctgcgtcgcccggccacctcaacctgacggaggaacccgaaaggcaacccccc
ttggagcgaccgccagaaccctgcaaagttgctcagcacgtcccgttgtccaacagcatg
tcgctacccaactcgcggatttccgccaccctcacagaagttcgcatgcagtcgtccagc
atgcagacgcccgcagaagtgctcgtggctatgaacaatcccctgcccttttcttcaagt
gtgttagccccaatttccaggcctgccgccgtgtcacatgacacggatgaagacgagggt
ttgaagcactttgaacaggaggcagagaaaatggtggcttacctccaggacggcgtggcg
gacgatgacagactggctgccaaagcccccgaaaaacccaaagctgcaggcctgccgctc
actcacaagaccgcactcaagtggttttacaaagaccctcaaggggagatacagggtccg
ttcaacaaccaggagatggccgaatggttccaggcgggttacttcaccatgtctctcctg
gtgaaaagaggctgcgatgacatctttcaggccttgggggagatgatgaagatttggggg
agagtccctttcacgccgggccccgcgcctccacccctgcagggtgacgccgaccaagaa
aggttgaagcggcagcaggagctcactgcgctcaacctttaccagttgcagcagcttcaa
tatcaatacctcttgaggcagcagtatgctcaggccctggcccagcagaaggcggcggtg
ctgagctcggctcctcttcaacagcagcagcaacaccaacagcagctcaacacgcttcag
cagcaataccaagctctcaagataagaacatcggagagccttctacctcctgttacacgg
tccctatctgtacccgactccggttctgtatgggaaatgcagaatccgtcctcacaggct
tcttgcacaccaaacctccccacagccacgtcaagcacatgggatggtagcagtgtgtgg
gacttgcctatagactccgtggcgaaggcgccgaccatcgagcagatgcagcagttggag
aaatcaaaggctgcaaagtcccaaccggggttcaattactgcggtcgaactttgaaacca
cactctctaaaacatcagttggaactggagaggcgcgaagctgaactgagagccaaaaga
gaagaagaagagaggaaacgactggaggaggctctgcgggctcgtcaagaggaggagcgt
aagcgcctggaggaggaggagctggcgagacaaaaacaggaggacgctctaagacgacag
agagaacaggaggaggcgcaacggagaaaaaaggagcaagaagagagactagcgcaggag
gaagccctgcgaagacttgaggagaggagaagagaggaggaggagaggaagaaaagggag
gacttccttcgcaaacaggaggaggagcgcagaaaacaagaggagctggaggcattaagg
aggcgcgaggaggagaagcgagcagaggaggaggctgcagcggcagcagcggcggcagca
gcggcggctgcccttgctcagcaacagcaggaggagcaaaagcggagggagcaggaggcg
cagagacagcaggagctgcagagacagaggcagcagcagcaggaggctctcagaagactg
caacagcagcagcagcttgcacaaatgaagcttccgttgtcatccaagtggggtcatcag
tccgccaacgccagcaacaagaatcagaacaccctgtcactggccgagatccagaaactg
gaagaggagcgggaaagacaggcactagaagagcagcagcgtcagcagcaggagctcctg
aagctgcagcagcaccaggccctgcagcaggcccagcaggcccaggccaagctgtcgggg
tgggggcacgccgctaagcagcccccagtgaccaagtctctgctggagattcagagggag
gaagcgcagcagatgaaacagaagaaggcgccccaacagcagcaacagaatcacatcttg
gcccagccgacccggccgcagaacaaaactacatctctgagcaactccgtatggggttcc
gtgaacatcaccccttgctcaaactgggcggcggactccagcagcatctggggggacacc
cacaactccaacatgggcttctgggacgaagctgtgaaggaggcagtccagcagcccccg
cccaccaagaaaggaaatgcgcagaaaaacaagggcaatgccaatctcagtaattttacg
agtggacgagccaacaagaaggtggaggaggaagagaagctgctcaggttattccaaggg
gtcaataagagccagcaggacggcttcatgcagtggtgcgagcgcactctccacagcctc
aacacagccaacaatctggacgttcccacgtttgcgtcgttcctcaaagaagtggactca
ccgtacgaggtgcacgactacgtcaaggcctacctgggggacactcccgaggccaaggac
tttgccaagcagttcctggagcgtcgtgccaaacagaacgctaatcagcaaaaaacgtcg
ccgccgccgcagcagaagcaagggcaagccctgaaacagcagcaggattctgtgtgggga
ggaacgggatcatcaacgctctacctgggcaaccacacaagtggtcagcacaagcaacat
catcaacagccgccgccgccgcagcagcgctttgagacggtcacctcagggaagaagaaa
aagaagcagaaaatggtccgtgcggatcccagccttctaggtttttctgttaacgcatcg
tccgagagactgaacatgggcgagattgagactgtggaggatttttaa
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