Syngnathus scovelli (Gulf pipefish): 125984520
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Entry
125984520 CDS
T08785
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125984520 (gigyf2)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125984520 (gigyf2)
Surveillance factors
Other surveillance factors
125984520 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
125984520
NCBI-ProteinID:
XP_049602402
LinkDB
All DBs
Position
17:complement(3713054..3723797)
Genome browser
AA seq
1335 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGASSGGGGGGSSSNNAVSSPPLSPVLPKYKLADYRYGREEM
LALYVKDNKIPIDLHDKEFLPILQEEPFPPLALVSFTEEEQRNFSLSVNSAAVFRRGSGA
VVSAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGFGRGGREMHRSQSWEERGDRRFEKPGR
KDADVAPGHFQLNHAASPMTNFAVRNNYEDAGLGLSRKHDFTRSESENWRTSRDDQNDVP
RSAAWHPEQRRRIPFDSREDERTYRRQRSGSGSLDDDRDALPEWCLEDADEEAGTFDSSG
AFLSLKKASKEPILEEAELDFKPLEECEEALEEEDSQPKETKETEIEAKQNSDRKVFTGV
SIMSEETPPVPPPAVGTIPEAQSASPGHLNLTEEPERQPPLERPPEPCKVAQHVPLSNSM
SLPNSRISATLTEVRMQSSSMQTPAEVLVAMNNPLPFSSSVLAPISRPAAVSHDTDEDEG
LKHFEQEAEKMVAYLQDGVADDDRLAAKAPEKPKAAGLPLTHKTALKWFYKDPQGEIQGP
FNNQEMAEWFQAGYFTMSLLVKRGCDDIFQALGEMMKIWGRVPFTPGPAPPPLQGDADQE
RLKRQQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAAVLSSAPLQQQQQHQQQLNTLQ
QQYQALKIRTSESLLPPVTRSLSVPDSGSVWEMQNPSSQASCTPNLPTATSSTWDGSSVW
DLPIDSVAKAPTIEQMQQLEKSKAAKSQPGFNYCGRTLKPHSLKHQLELERREAELRAKR
EEEERKRLEEALRARQEEERKRLEEEELARQKQEDALRRQREQEEAQRRKKEQEERLAQE
EALRRLEERRREEEERKKREDFLRKQEEERRKQEELEALRRREEEKRAEEEAAAAAAAAA
AAAALAQQQQEEQKRREQEAQRQQELQRQRQQQQEALRRLQQQQQLAQMKLPLSSKWGHQ
SANASNKNQNTLSLAEIQKLEEERERQALEEQQRQQQELLKLQQHQALQQAQQAQAKLSG
WGHAAKQPPVTKSLLEIQREEAQQMKQKKAPQQQQQNHILAQPTRPQNKTTSLSNSVWGS
VNITPCSNWAADSSSIWGDTHNSNMGFWDEAVKEAVQQPPPTKKGNAQKNKGNANLSNFT
SGRANKKVEEEEKLLRLFQGVNKSQQDGFMQWCERTLHSLNTANNLDVPTFASFLKEVDS
PYEVHDYVKAYLGDTPEAKDFAKQFLERRAKQNANQQKTSPPPQQKQGQALKQQQDSVWG
GTGSSTLYLGNHTSGQHKQHHQQPPPPQQRFETVTSGKKKKKQKMVRADPSLLGFSVNAS
SERLNMGEIETVEDF
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggccgagacccagacacttaactttggaccagaatggctccgtgccctttctggaggt
gcaagcagtggcggcggtggcggaggaagcagcagcaacaacgccgttagctcgccacct
ctctcgcctgtattgccaaagtacaagcttgcagactatcgttacggaagagaggaaatg
ttagcactttatgtcaaagacaacaagatccctatagacttgcatgataaggagttcctg
cccatattgcaagaggaacctttcccgcctctggcacttgtttcttttacagaggaagaa
cagagaaatttttccttgtctgtaaacagcgctgccgtattccgacgaggaagcggcgca
gtagtgagtgcgcctcgaggccgaagtacctcaaggggtagaggtcgaggaagaggagac
ggagggttttaccaaagaagttttgatgatgtggaaggttttggccgtgggggcagggag
atgcatcgctcccagagctgggaggaaaggggcgatagaagatttgaaaagccaggccgg
aaagacgcggatgtggcgccaggacatttccagctgaatcacgcagcttccccaatgacg
aatttcgcagtgcgaaacaactacgaggatgccgggctgggcctgtcgaggaaacacgac
ttcacgcgctcagagagcgagaattggcgtacctctcgtgacgatcagaacgatgtacct
cggagcgcggcgtggcatccggagcagcggcgccgcattccgtttgactcgcgagaagac
gaacgcacctacaggaggcagcgttcgggcagcggcagcttggacgacgacagggacgct
ctgcccgagtggtgcctggaggacgcggacgaagaggcgggcaccttcgactcgtcgggg
gcctttctctcactcaagaaagcctccaaagagcccatcctggaggaggccgagttggat
tttaaacccttggaagagtgtgaggaggccctagaggaggaagacagtcagcccaaggag
accaaagaaacagaaatagaagccaagcaaaattctgaccgaaaagtattcacgggggtg
agcataatgtcagaggagaccccacctgttcccccgcccgccgttgggacaatccccgag
gcccagtctgcgtcgcccggccacctcaacctgacggaggaacccgaaaggcaacccccc
ttggagcgaccgccagaaccctgcaaagttgctcagcacgtcccgttgtccaacagcatg
tcgctacccaactcgcggatttccgccaccctcacagaagttcgcatgcagtcgtccagc
atgcagacgcccgcagaagtgctcgtggctatgaacaatcccctgcccttttcttcaagt
gtgttagccccaatttccaggcctgccgccgtgtcacatgacacggatgaagacgagggt
ttgaagcactttgaacaggaggcagagaaaatggtggcttacctccaggacggcgtggcg
gacgatgacagactggctgccaaagcccccgaaaaacccaaagctgcaggcctgccgctc
actcacaagaccgcactcaagtggttttacaaagaccctcaaggggagatacagggtccg
ttcaacaaccaggagatggccgaatggttccaggcgggttacttcaccatgtctctcctg
gtgaaaagaggctgcgatgacatctttcaggccttgggggagatgatgaagatttggggg
agagtccctttcacgccgggccccgcgcctccacccctgcagggtgacgccgaccaagaa
aggttgaagcggcagcaggagctcactgcgctcaacctttaccagttgcagcagcttcaa
tatcaatacctcttgaggcagcagtatgctcaggccctggcccagcagaaggcggcggtg
ctgagctcggctcctcttcaacagcagcagcaacaccaacagcagctcaacacgcttcag
cagcaataccaagctctcaagataagaacatcggagagccttctacctcctgttacacgg
tccctatctgtacccgactccggttctgtatgggaaatgcagaatccgtcctcacaggct
tcttgcacaccaaacctccccacagccacgtcaagcacatgggatggtagcagtgtgtgg
gacttgcctatagactccgtggcgaaggcgccgaccatcgagcagatgcagcagttggag
aaatcaaaggctgcaaagtcccaaccggggttcaattactgcggtcgaactttgaaacca
cactctctaaaacatcagttggaactggagaggcgcgaagctgaactgagagccaaaaga
gaagaagaagagaggaaacgactggaggaggctctgcgggctcgtcaagaggaggagcgt
aagcgcctggaggaggaggagctggcgagacaaaaacaggaggacgctctaagacgacag
agagaacaggaggaggcgcaacggagaaaaaaggagcaagaagagagactagcgcaggag
gaagccctgcgaagacttgaggagaggagaagagaggaggaggagaggaagaaaagggag
gacttccttcgcaaacaggaggaggagcgcagaaaacaagaggagctggaggcattaagg
aggcgcgaggaggagaagcgagcagaggaggaggctgcagcggcagcagcggcggcagca
gcggcggctgcccttgctcagcaacagcaggaggagcaaaagcggagggagcaggaggcg
cagagacagcaggagctgcagagacagaggcagcagcagcaggaggctctcagaagactg
caacagcagcagcagcttgcacaaatgaagcttccgttgtcatccaagtggggtcatcag
tccgccaacgccagcaacaagaatcagaacaccctgtcactggccgagatccagaaactg
gaagaggagcgggaaagacaggcactagaagagcagcagcgtcagcagcaggagctcctg
aagctgcagcagcaccaggccctgcagcaggcccagcaggcccaggccaagctgtcgggg
tgggggcacgccgctaagcagcccccagtgaccaagtctctgctggagattcagagggag
gaagcgcagcagatgaaacagaagaaggcgccccaacagcagcaacagaatcacatcttg
gcccagccgacccggccgcagaacaaaactacatctctgagcaactccgtatggggttcc
gtgaacatcaccccttgctcaaactgggcggcggactccagcagcatctggggggacacc
cacaactccaacatgggcttctgggacgaagctgtgaaggaggcagtccagcagcccccg
cccaccaagaaaggaaatgcgcagaaaaacaagggcaatgccaatctcagtaattttacg
agtggacgagccaacaagaaggtggaggaggaagagaagctgctcaggttattccaaggg
gtcaataagagccagcaggacggcttcatgcagtggtgcgagcgcactctccacagcctc
aacacagccaacaatctggacgttcccacgtttgcgtcgttcctcaaagaagtggactca
ccgtacgaggtgcacgactacgtcaaggcctacctgggggacactcccgaggccaaggac
tttgccaagcagttcctggagcgtcgtgccaaacagaacgctaatcagcaaaaaacgtcg
ccgccgccgcagcagaagcaagggcaagccctgaaacagcagcaggattctgtgtgggga
ggaacgggatcatcaacgctctacctgggcaaccacacaagtggtcagcacaagcaacat
catcaacagccgccgccgccgcagcagcgctttgagacggtcacctcagggaagaagaaa
aagaagcagaaaatggtccgtgcggatcccagccttctaggtttttctgttaacgcatcg
tccgagagactgaacatgggcgagattgagactgtggaggatttttaa
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