Syngnathus scovelli (Gulf pipefish): 125984523
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Entry
125984523 CDS
T08785
Symbol
lrrcc1
Name
(RefSeq) leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1
KO
K16475
leucine-rich repeat and coiled-coil domain-containing protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125984523 (lrrcc1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125984523 (lrrcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
LRR_6
LRR_NXF1-5
SlmA-like_C
Motif
Other DBs
NCBI-GeneID:
125984523
NCBI-ProteinID:
XP_049602411
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All DBs
Position
17:3988638..3995467
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AA seq
1006 aa
AA seq
DB search
MEEKEISLIDKSISSLLEVPLRPTITSLNLHCNRIPRIEGLASTLLLRHLDLSSNRIAVI
EGLASLTALRTLNLSCNAITKVEGLNGLVNLTKLDLSFNQINDLSGLLHLHGPGRKLRYL
SLHSNRLASIEHLLQCLLGLQGLREVFLSHGGKGNPLCMKPGYREMVMQSLPQVSFLDGL
DRLGQPSYSPTDSPCDIPGLENYVDLLLLSDASNNEADALVTTPSIREVLSHFGQSVTPE
AFGNLLAAPNRERVQQDQQQIRSADVDRMLTINEERVKKLEQQVSCLVQQVSAKHQYSQA
NDSAVKARKDVNDTDRTSESEYDSGKENGSRSAIPKYRKPASTRTSKRSNSDQENPKQRV
TKPTVRWSSATAKGPIDASVPARRVTLRAGKEPINVKCKSNEEETYKAIVEERDQERERR
WKAEQAVTKLTEELQCLKTKVSEEKDLQSMALHTTDRLKDLVLKERSGRCELETRVEQLS
GRCRSLTQQLEQARGSEERHKHALRRLEEDVTHGEALRARQQAQEVKRQQELENKVASLK
RELDVQRAKVQELHELLACREQEHRKQLGMRLQPGGTDFLAAVAREVASERQSHAQREAE
LKDKVEEGKKAYTALEDEFRMALTIEATRFSEVKKACDQMAAELPELRATLAQSQQAEKK
SASLVQELTVLAKEQKIRISELANAKRDAVTEFKRRAQALEADLAQDRHMRLQLEALKKD
KARLSAQLGAQESVIDGLRAERRLWGQELAQQGASLAQDRGRLEARIEALGAEVEAQKKQ
IERDSDALKIKSKIIEDQTESIRKLKETQQERDEQARRLRDDKARAEKTFQRRLKEDASR
LMELEERIQHLVVHKEELKQQLEDKEAQVEEAKRLHSESAKKWQEKAQLLTQLETQVKRM
KDTFDNKERSLLEENEQLSQSHRAAVEKLRCMDDAFRTQLESLQAAHQAELLQMANDKHS
QIEEANQKVFEVEEEMRQLLLEMDANKRITEEKIKRLNSVLKDFNF
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaggaaataagtttgattgacaagagtatttcaagcttgctggaagttcct
ctgcgtcccaccatcacatcgctcaacctgcactgcaaccgcatcccgaggattgagggc
ttagcatcgacgcttctcctgagacacttggacctctcttccaaccgcattgctgttatt
gagggtcttgcttctctcacggccctgaggactttaaatttatcctgcaatgccatcacc
aaggttgagggattgaacggtctggtgaatttaacaaagttagacttgtccttcaatcag
ataaacgacctcagtggcctattgcatctccacggccccggacgcaaactcaggtacctc
agtctccatagcaaccgtcttgccagcattgagcacctcctgcagtgcctgctggggttg
caggggttgagagaggtgtttttgagccacggcggcaaaggcaacccgctgtgcatgaag
ccaggttaccgtgagatggtgatgcagtcgctgccccaagtgtcatttctcgatggattg
gatcgtctgggacagccatcatattccccaacggacagtccatgtgacatccccgggctg
gagaactacgtggacctcctcctgctctccgatgccagcaacaatgaagcggacgctctt
gtgaccacacccagtataagggaagttctgagccactttggacagagcgtcacccctgaa
gcctttggcaatctgctggcagcacctaacagggagcgcgtccagcaggaccagcagcag
atccgctcggccgacgtcgaccgaatgttgactataaacgaagagcgagtcaagaaactg
gagcagcaggtgtcctgccttgttcagcaggtttctgcaaagcaccagtacagtcaagct
aacgactctgcggtcaaagctcggaaggacgtgaatgacacagaccgcacgtcagaaagc
gagtacgacagcggcaaggaaaacggcagccgctccgccatccccaaataccgtaagccc
gcatcgaccaggacaagcaagagatcaaacagtgatcaggagaatccgaaacagagggtt
acaaagcctactgtcaggtggtcctctgccaccgccaaagggcccattgatgcatctgtt
ccagcgaggagggtcacgctgagagccggcaaggagccaatcaatgtgaaatgcaagtct
aatgaggaggaaacctataaggctattgtagaagagcgagaccaggagagggagaggcgc
tggaaggccgagcaggccgtcaccaagttgacggaggaactccagtgcctgaagaccaaa
gtcagcgaggaaaaagacctacagagtatggccttgcacaccaccgacaggcttaaagac
ttggtactgaaggagcggtcaggacgctgcgagctggaaacacgtgtggagcagctgagt
gggaggtgccgctcgctgacccagcagctggaacaggctcgcggcagcgaggagcgtcac
aagcacgcgctgcggcgactagaggaggacgtcacccacggggaggcgctgcgggctcgc
cagcaggcccaagaggtgaagcgacagcaggagctggagaacaaggtggcgtctctgaag
cgcgagttggatgtccagagagccaaagtgcaggagctgcacgaactgctggcgtgccgg
gaacaagagcacagaaaacagctggggatgcggctgcagccgggcgggacggacttcttg
gcagcagtggcaagagaggtggcgtctgagaggcaaagtcacgctcagagggaggctgag
ttgaaggacaaagtggaggagggcaagaaagcatacacggccctggaggacgaattccgc
atggcgctcaccatcgaggctacgcgcttctccgaggtaaagaaagcttgcgatcaaatg
gcggcagagctgccggagcttcgagcgacactggctcagtcgcagcaggcagaaaagaaa
tccgcctccctggtgcaggagctcactgtgttggccaaggagcaaaagattcgcatttca
gaacttgccaacgccaagagagatgctgttactgagttcaagaggcgcgctcaggctctg
gaggccgacctggctcaggaccgccatatgcgccttcagctggaggcgctcaagaaggac
aaagcgcgactttcggcccagctcggcgcgcaggagtctgtcatcgatggactcagagca
gagaggaggctttgggggcaggagctcgctcagcaaggagcatctctggctcaggatcgc
ggacgtctggaggccaggattgaggccctgggtgccgaagtggaggcgcaaaagaaacag
attgagcgggacagcgacgccctcaaaatcaaaagcaaaatcattgaggatcaaacggaa
tccatccgcaaactcaaagagacgcagcaggagcgcgacgagcaggcccgcaggctccgt
gacgacaaggcccgggccgagaagacgttccagcggcgactcaaggaggacgcgtctcgg
ctgatggagctggaggaacgcatccaacacctcgtcgtgcacaaggaggagctgaagcag
cagttggaggacaaggaggcccaagtagaagaggcaaaacgacttcacagtgaatctgca
aaaaagtggcaagaaaaggctcagctgctcactcaactggagacccaagtgaagcgtatg
aaggacaccttcgacaacaaagaacgctcgctcctggaagagaatgaacaactgagccaa
tcacacagagcggcggtggagaagctgcgctgcatggacgacgcctttcgcacgcagctc
gagtccctccaagccgcccatcaggctgagctgcttcagatggcgaatgacaagcacagt
cagatcgaagaagccaatcagaaggtattcgaagtggaagaggagatgcgtcagctcctg
ctcgagatggacgccaacaagaggatcacagaggagaaaataaaacgtcttaacagtgtg
ctaaaagatttcaacttttaa
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