Syngnathus scovelli (Gulf pipefish): 125984525
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Entry
125984525 CDS
T08785
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a
KO
K21066
A-kinase anchor protein 18
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125984525 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125984525 (arhgef18a)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125984525 (arhgef18a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH_13
YwqH-like
PH
Nas2_N
Effector_1
Motif
Other DBs
NCBI-GeneID:
125984525
NCBI-ProteinID:
XP_049602418
LinkDB
All DBs
Position
17:3851335..3859116
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AA seq
976 aa
AA seq
DB search
MTVSPTQDKAQPGSPSYKDAARNFRSDPARMDEVEGIRGRVVVEDAISLAEPINLEDGHY
SVLRGGLECDSQNLEAESWSAAANPDYMQTLDREAIKRQDVIYELMQTEMHHVRTLKILR
HVYMHELRQSLLLNDDKVDTLFPGLDALLTLHQHFLDSLKVRQSQCQERGSPNGYQITQL
GDILISQFSGSVGKKMKEWYGLFCSRHTEAVSFYKEQLQSNKKFQNLMKKIGQLALVRRL
GIPECFLLVTQRITKYPVLVERLIQNTEVDTDEHESLLQGLAGIKDTISRVNDSVRHYEQ
ASRLREIYFRLEPKSVGRLKDGQLIRREDLIQGNRTLLHEGPVTWKSSGRQKEIHAVLLS
DVLLLLQDKDQKFVFAAVDNKPPVISLQNLILREVAHEDKAMFLICAFVSTPQEVYEMYE
LHTGSKEERVAWMGRIRDAINRYAEEDKDFQELKSRLQEYRERLKARDEHIELGLSEKLH
IFSVMYQDMTGQESPARRLLLRGDPTDLQQGETLLKGALNEVESLQNLLFSTRKYPNNIQ
VGDHVISWRLHGRAEASGPADMNPSANHTSSDGDAVDRLSGGSFEADDAQFYSESREQPA
NSYAWGPSWASAASDFQAEVHDRVILLAQKLYTLQAIVAQQDSQIELQHILRSDGGRASR
LSSSTLLEQEKQRNLEKHKEDLANLHKMQAQHREAQQRWEKDRERQSVYMEALETQLKLR
EDECLRREERLRQEKAEYDRQWENYQQGLERLRETTKAVEREKESLNQEKERLEEKLKKY
TEALNAGNVNYDDVYVSLSSYQSFRGSLATSPNGGPPRPHVLLANSRDNKKETPPKVPPR
KESMSVPPAAKPELPVHLVSTTNQVHKAAGVVQQIPTKLATKAKDKGFRMKAAHQRAHSA
ASIDVSQLVPIRVTGKEGGSMRAISLSDDTSGQGRSDVKTSQSFMHFRSHVEAQPPVPPP
FPKEVLEKPKEKVIFL
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcagccccactcaagacaaagctcagcccggttcaccctcatacaaggacgct
gcaagaaacttcagatccgacccggcacggatggatgaggtggagggcatccgggggagg
gttgtcgtcgaggatgccatttccctggctgagcccatcaatctggaagatggccattac
tctgtgctgcgaggcgggctggagtgtgacagtcagaacctggaagcagaatcatggagc
gcggcagccaacccagactacatgcaaactctggaccgagaggccatcaaaagacaggat
gtcatctatgagctgatgcagacagagatgcaccatgtgcgcacgttgaagatcctccgg
cacgtctacatgcacgagctgcgccagtccctgctgctgaacgacgacaaagtggacacg
ctgttccccggcttggacgccctgctcacgctgcaccagcacttcctggacagcctcaag
gtgcgccaaagtcagtgtcaagagcggggcagtcccaacggctaccagatcacgcagctg
ggagacatactcatctcacagttttctggctcggtgggtaaaaaaatgaaggagtggtac
ggccttttctgtagccgtcacaccgaagctgtcagcttttacaaggagcagctacaaagc
aacaagaagtttcaaaacctcatgaagaaaattggtcagctggccctggtgagaaggttg
ggtatccctgagtgtttcctactggtgacgcaacgcatcacaaagtaccccgtcctggtg
gagcgactcatacagaatactgaagtcgacacagacgagcacgagtctctgctccaaggc
ctggcgggcatcaaggataccatctcccgagtgaacgacagtgtcaggcactacgagcag
gcctcccgcctccgtgagatctactttcgactggagcccaagtcggtggggcggctgaaa
gacggccagctcatccgccgggaggatctgatccagggcaaccggactctgctgcacgaa
ggccctgtcacctggaagtcttctggcagacagaaagagatacatgctgtgctgctgtca
gatgtgctcctgctcttacaagataaagatcagaagtttgtttttgctgctgtagacaat
aaaccgccggtgatcagccttcaaaacctgattctgagggaggtggcccatgaggataag
gccatgttcctcatctgcgcgttcgtctccacaccgcaggaggtgtacgagatgtacgag
ctgcacaccggctccaaggaggagcgcgttgcctggatgggccgcatacgagatgccata
aatcgttacgcggaggaggacaaagacttccaggaactgaagagtagactgcaagaatat
cgagagcgtttaaaggccagagatgagcacatcgagctgggcctgtccgagaagttgcac
attttcagcgtcatgtatcaagacatgaccggccaagagagccccgcaagaaggctattg
ctgcgaggagaccccactgatctccagcagggcgaaacattgctcaaaggagccctcaat
gaagtggaaagtcttcaaaacctactctttagcacaagaaaataccccaataacatccag
gtgggcgatcacgtaatatcgtggaggttacacgggagggccgaggcctcggggccggcc
gacatgaacccatctgcaaatcacacgtcttccgatggggatgcggtcgacaggctcagc
ggcggcagctttgaagccgacgacgctcagttctactccgagagccgggagcagcctgcc
aacagctacgcatgggggcctagttgggcttcagccgccagcgacttccaagctgaggtg
catgaccgtgtcatactgctagcccagaagctgtatacattacaagccatcgtggcccag
caggacagtcagatcgagctccagcacatcctgcgctcagacggcggcagagcctcgcgg
ctctccagcagcaccttgctggagcaggagaagcagcgcaatctggagaagcacaaggag
gacctggccaacctgcacaagatgcaggcgcaacaccgcgaggcgcagcaacgctgggag
aaggaccgagagcgccagagtgtctacatggaggcgctggagacccagctgaagctgcgg
gaggacgagtgcctccggcgtgaggagaggctccgccaggagaaggcggagtacgacagg
cagtgggagaattaccagcagggtctggagcgcctcagggagaccaccaaagccgtggag
agggaaaaagaaagcctgaatcaggagaaagaacgtctggaagagaagttgaagaagtac
acggaggctctgaacgcagggaacgtcaactatgatgatgtgtacgtcagtctgtccagc
taccagtcattcaggggcagcctcgccaccagcccgaacggaggccccccacgtccgcat
gtcctactggccaactcccgcgacaataagaaggagacgccgcctaaagtcccgccgcgc
aaggagagcatgagcgtccctccggcggccaagccagagctgcccgtgcacctggtcagc
accaccaaccaggtgcacaaggcggccggcgtggtgcagcaaatccccaccaagctagcc
accaaagccaaggacaagggcttccgtatgaaggcggcgcaccagagggcccacagcgca
gcctccatcgacgtgagccagcttgtgcccatcagagtgacggggaaggaaggaggcagt
atgagagccatctccctctcggatgacacgtctggacaaggcagaagtgacgtgaaaacg
tcgcagtccttcatgcattttcgaagtcatgtggaggcccagcccccagtcccaccccca
ttccccaaggaagtgctggagaagccaaaggagaaggtgatattcctttaa
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