Syngnathus scovelli (Gulf pipefish): 125984598
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Entry
125984598 CDS
T08785
Symbol
cpdp
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125984598 (cpdp)
Enzymes [BR:
sscv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
125984598 (cpdp)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
125984598 (cpdp)
Prokaryotic type
125984598 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
125984598
NCBI-ProteinID:
XP_049602556
LinkDB
All DBs
Position
17:complement(13111817..13117761)
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AA seq
531 aa
AA seq
DB search
MRHRVTRTSFFSFLTKSFTTIMSGKKRKAAGAAAAECSAKQLKLASTKEGNKVKASGWLQ
DLVKQQRDDNKDMKVNKKRVRVISDTQEAKQDSEGVLYWMLRDQRVQDNWALIHAQHLAM
KKKLPLHVCVCLFVPKSELSTLRHYSFMLKGLEEVEKECKSLDIQFHLLHGSAAESLSGF
VSERGFGAVVTDFSPLREPLKWLDDVKKALPDGVPLIQVDAHNIVPCWLASPKLEYAART
IRGKITKLLPEFLTDFPVVVKHPHAATKTTKLVDWAKAVASLQVDRTVDEPEWAQPGTMS
GMAMLESFIDVRLKLFGTHRNDPNVAALSQLSPWIRFGHVSAQRVALQVQRGGKDAGQSV
APFIEELVVRRELSDNFCFYNGNYDSVKGAYEWAQKSLSDHAKDKRPYLYTREQLEKAKT
HDKLWNAAQYQMISEGKMHGFLRMYWAKKILEWTSSPEEALSIALYLNDRYELDGQDPNG
FVGCMWSICGIHDQGWAERDVFGKIRYMNYKGCLRKFDVPKFEKKYCPKGL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgtgttacaaggacctcctttttttctttccttaccaagtcattcacgacc
atcatgtcaggcaaaaagcgcaaagcagctggggccgccgctgctgagtgcagcgcgaag
cagctgaagttggcctccactaaggaaggtaataaggtgaaagcatcaggatggctgcaa
gaccttgtcaaacaacagagagatgacaacaaggacatgaaagtcaacaagaaacgtgtt
cgagtcatatcagacacgcaagaggcaaagcaggactctgaaggggtcctctattggatg
ctgagggaccagagagtacaagataactgggcattgatccacgcccaacaccttgccatg
aaaaagaagctgcctctgcacgtctgcgtctgcttgtttgtccccaaatcagagttgtcc
accctgagacattacagtttcatgctgaaaggtctggaagaagttgaaaaggaatgcaaa
tctctcgacatccagttccatttgctgcacggctctgcggccgaatcgctgtctggcttt
gtgtccgagcgcggctttggggcagtcgtgacggacttttcacctctcagggagcctctc
aagtggttggatgatgtcaaaaaggctcttccggatggtgttccactcattcaggttgat
gcccacaatattgttccgtgctggctagcatctcctaaacttgaatatgctgccaggaca
atccgggggaaaattacaaaacttttaccagagttccttactgattttcctgtggttgtg
aagcacccccacgcggcaacaaaaaccactaaactagtagattgggccaaagcagtggct
tcactgcaggtggacagaactgtggacgagccggagtgggcccagccaggcaccatgtcg
ggaatggccatgttggaatccttcatcgacgttcgcctcaaactgttcggcactcaccgt
aatgaccccaacgttgctgcgctcagccaactctctccttggatccgctttggacacgtt
tctgcccagcgtgtggcactgcaagtccagcgtggcgggaaggacgccggtcaatcagtc
gcacccttcatcgaagagctggtggtgcgcagagaactgtcggacaacttctgcttttac
aacgggaattatgacagtgtgaagggtgcttacgaatgggctcaaaagagcttgagcgat
cacgccaaggataaacggccatatctgtacacccgagagcaactggagaaagccaagacg
catgacaaactgtggaatgcagctcagtaccagatgatctccgagggcaaaatgcatggt
ttcctgcgaatgtactgggccaaaaagattctcgagtggacttcttcaccagaggaggcg
ctctccatcgctctgtatctcaacgatcgctatgagctggatggccaagaccccaacgga
tttgtgggttgtatgtggtccatctgtggcatccacgaccaaggatgggcagagagagac
gtttttgggaagatccgctacatgaactacaaaggctgtcttcgcaagttcgacgtaccc
aagtttgagaaaaaatactgtcccaaaggtctttga
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