Syngnathus scovelli (Gulf pipefish): 125984613
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Entry
125984613 CDS
T08785
Name
(RefSeq) calcium-activated potassium channel subunit beta-2-like
KO
K04938
potassium large conductance calcium-activated channel subfamily M beta member 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
125984613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125984613
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
125984613
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GFIT
Motif
Pfam:
CaKB
KcnmB2_inactiv
Motif
Other DBs
NCBI-GeneID:
125984613
NCBI-ProteinID:
XP_049602588
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Position
17:13020595..13023367
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AA seq
235 aa
AA seq
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MFFVAGAKNTASGVGNERRSIYQKFREVDILDKKKTVTALKPGEDRAILLGLGMIFSSVM
MYFVLGITILRSYAESAWTEEGVCVVLNATVTADVNCSYNCGSDCWRVSKYPCLQVYVNV
NNTGRIGRLSHNEETQDASSECFYVPRCQKDSAQMHTVIMNISEHLKAKQQVPCYFDPSE
QQETVLLTRLYDHSVVFHSLLWPSCMFVGGVLIIVMVKLTQYLSRLCEQIVKIRM
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgtcgccggggccaaaaatacagcatcgggcgtaggaaatgaaaggaggtca
atctatcagaaatttcgggaggttgatatactggacaagaaaaagaccgtgacggctctg
aagcctggtgaagatagagctattctcctgggtctaggaatgatcttctcctccgtcatg
atgtactttgttcttgggatcactatattacgctcgtacgctgaaagcgcatggacagag
gaaggcgtgtgcgttgttcttaacgccacggtcacggcagacgtgaactgttcctacaac
tgtggctcagactgctggcgagtctccaaatacccctgtctgcaggtctacgtgaacgtc
aacaacacaggccgcatcggtcgattatctcacaatgaagagacgcaggacgccagctcg
gaatgtttctatgtgcccaggtgccagaaggacagcgctcaaatgcacaccgtgatcatg
aacatctccgaacacctgaaggccaaacagcaggttccttgttactttgaccccagcgag
cagcaggagacggttctcctgactcggctctacgaccacagcgttgtcttccactcgctg
ctgtggccctcgtgcatgttcgtcggaggcgtcctcataattgtgatggtcaagctcaca
cagtacctgtccagattgtgcgaacagattgtgaagatcaggatgtga
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