Syngnathus scovelli (Gulf pipefish): 125984636
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Entry
125984636 CDS
T08785
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03030
DNA replication
sscv03410
Base excision repair
sscv03420
Nucleotide excision repair
sscv03430
Mismatch repair
sscv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125984636 (pold3)
03410 Base excision repair
125984636 (pold3)
03420 Nucleotide excision repair
125984636 (pold3)
03430 Mismatch repair
125984636 (pold3)
03440 Homologous recombination
125984636 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125984636 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sscv03032
]
125984636 (pold3)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125984636 (pold3)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125984636 (pold3)
DNA replication proteins [BR:
sscv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
125984636 (pold3)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
125984636 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
125984636 (pold3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
125984636
NCBI-ProteinID:
XP_049602639
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All DBs
Position
17:6584307..6601437
Genome browser
AA seq
434 aa
AA seq
DB search
MDELYLDNIDEYVNDQDKIVTYKWLSLALGVHVNTAKQMLYHYLDHKRKESSAQLHATYL
VSGKFVDNGHASHKVSVVREEQLEDFKSKMSLIVSEHVYSVQKALLRDSGPLYAVDYDAV
KDNLSSCGKHSAIRCSDAVPVSSVEGKTRQAPHTPVPEPQQGKKPTANSDVASSKAKPAK
GIMGMFAVKAAAAESQNGGKEVKSEPREATAEVNVFKGKALTKSNHTLNFFGNQSTKKPV
KKEEEETVESSSAELQQLKKEPEQKVTTEPPKHNKKDSRSKTKRLQSSDSEEEKMETKKR
RRIKKPVPDSSEDEDVIPDSPPRTAVREVAPLDMPAKEPASHPGLCETTKIRKRRRVLKS
RTFVDEEGCIVTEKGYESESYSEDDSAVPAVQQAETKTQAKAKTSMSKEKKSQKKSTENK
ATKQASIMGFFQKK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactttatttagataacatcgacgagtatgtcaacgaccaggacaaaatcgtt
acatataaatggctgagtctcgctcttggagtgcacgtcaacacagctaaacaaatgctc
taccactacttggaccacaaaaggaaggagagctcggctcagctccatgcaacgtacttg
gtgtcgggaaagtttgtagacaatggtcacgcgagtcacaaggtgtccgtggtgcgcgag
gaacagctggaagacttcaaatccaagatgagtttgatcgtgagcgagcatgtttacagt
gtccagaaagcgctgctgagggacagcgggccgctctacgctgtcgattacgatgctgtc
aaagacaacctgtccagctgcggcaagcatagcgccatccgatgctccgacgctgttccc
gtgtcctcggtcgaaggaaaaacgcgtcaagctccgcacactcctgttccagagccccaa
cagggcaagaagcccaccgctaacagcgacgttgcgtcttcaaaagccaaaccggccaag
ggcatcatgggaatgttcgctgtcaaggctgcagcggctgagagccaaaacggtggcaaa
gaggttaagtcagagcctcgggaagctacggctgaggtgaatgtcttcaaaggtaaagca
ttgacaaagtccaatcacacgctgaacttctttggaaatcaaagcacgaagaaacctgtg
aagaaggaggaagaagagacagtggagtcttcatcggcagaactgcaacagctgaaaaaa
gagccagaacaaaaggtcacaacagaaccgccaaagcacaacaagaaagattcaagaagt
aaaaccaaacgcctgcaaagttctgacagtgaggaggagaaaatggagacgaagaagcgg
cgccggatcaagaagcctgtgcccgacagcagtgaagacgaagacgttattccagattca
ccgccacgaacagctgttagagaagtggcgccgctggacatgcccgctaaagaacctgct
tcacatccgggactctgcgagacgacgaaaatacgcaagcgcagacgtgtccttaagtct
cgaacctttgtggacgaagaaggctgcatcgtgacggagaaaggctacgagagcgagtcg
tactcggaagacgacagcgccgtccccgccgtccagcaagcagagaccaaaacacaggcc
aaagccaaaacctcaatgagcaaagagaagaaaagtcagaagaaaagcacggagaacaaa
gccaccaaacaagcttctattatgggatttttccaaaagaagtga
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