Syngnathus scovelli (Gulf pipefish): 125984656
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Entry
125984656 CDS
T08785
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125984656
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125984656
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
125984656
NCBI-ProteinID:
XP_049602667
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All DBs
Position
17:complement(9799415..9807784)
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AA seq
527 aa
AA seq
DB search
MNWTGFMSDVAVGVKRGSDELSMYASNPSSMAANGSDTKKQRLDESPPSRVLHIRKLPNE
VSETEVIALGLPFGKVTNILMLKGKNQAFLELSTAEAAITMVNYYAAVTPQVRNSPVFIQ
YSNHKELKTDSALNQRAQAVLQAVSAVQDGSSPSSDHGVLDLAPPPSPVLRIIIDNMFYP
VTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLR
IDFSKLVNLNVKYNNDKSRDYTRPDLPTGDGDSNKDHSLLGTPSGALASYSSGAGYSSSL
SLSQGAGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGD
VQRVKILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDD
QLLTKDFAGSPLHRFKKPGSKNFQNIFPPSATLHLSNIRDGIGEDDLRLLFSNGGGTVKA
FKFFQDRKMALIQMSSVEEAIQTLMDLHNYDMGGNHHLKVSFSKSTI
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaactggactggttttatgagtgatgttgcggttggtgtgaagagaggctcagatgag
ctcagtatgtacgctagcaaccctagctctatggcagcaaatggcagtgacactaagaaa
caacgtctggatgagtcacctccatcgagagttcttcacatcagaaaacttcccaatgaa
gtatccgagacagaagtcattgcactgggtcttccctttggaaaagtgaccaatatactg
atgctaaagggcaaaaaccaggcatttctggagctcagtacagcagaagctgccattaca
atggtgaactactacgcagctgttacaccacaggtcagaaacagtcccgttttcatccag
tactctaaccataaggaactaaaaacagattctgcgctaaaccagagagcccaggcagtg
ctgcaagcggtctcagcagttcaagatggaagttctccatcatctgaccatggagttctg
gaccttgctccacctcccagtcctgttctgcgtattataatagacaacatgttttatccc
gtgactctcgatgttttacaacagatattcagtaagtttgggactgtgatgaagataatt
acgttcaccaagaacaaccaatttcaagcactcctgcagttcagtgatcctgtcaacgcc
cagcaggctaaactgtctcttgatggacagaatatctataattcatgctgtactttgagg
atcgatttcagtaaactggtcaatctgaacgtcaaatacaacaatgataagagtcgagat
tacacccgaccagatctacctactggagatggagattcaaacaaggatcattctttattg
ggtacaccatctggagcgctagcgtcgtactcaagtggggcgggttactcgtcctctctc
tccctctcgcagggtgcaggagccattagccctttgagcgccgcggcagctgcagcagcc
gctgcaggacgagttgctctgtccgggtctggagtttcaggagttctgttggcatccaac
ctcaatgaagagatggtcacgcctcaaagtctctttaccctcttcggtgtctatggtgat
gtgcagcgggtgaagatcctctacaataaaaaggacagtgcgcttatacagttatcagat
ggcaaccaggctcaactggctatgagccacctgaatggtcagaaggtatttggtaaagtg
atgcgagtgactctgtccaaacatcaaactgttgctctgcccagagaagggctggatgac
cagctgcttaccaaagattttgctggatcgccactacatcgcttcaagaaaccaggatcc
aaaaactttcagaacatctttcccccttctgcaacgctacatctctccaacatccgggac
ggcatcggagaggacgacctgcgtctcttattctccaatggcggggggacggtcaaggcc
ttcaagttcttccaggaccgtaaaatggccttgatccagatgtcgtcagtagaagaagcc
atccagacgctgatggatcttcataattatgacatgggcggcaatcaccacctcaaagtt
tccttctcaaagtctaccatctaa
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