Syngnathus scovelli (Gulf pipefish): 125984660
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Entry
125984660 CDS
T08785
Symbol
ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125984660 (ift57)
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
125984660 (ift57)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
DASH_Dad1
Laminin_II
Mod_r
CCDC93_CC
Med9
DUF7615
DUF4200
Spectrin_1st_PEPL
Fez1
COG3_N
Exonuc_VII_L
FAP206
ZapD
Motif
Other DBs
NCBI-GeneID:
125984660
NCBI-ProteinID:
XP_049602671
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Position
17:complement(6996117..6999025)
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AA seq
404 aa
AA seq
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MAEDGRRGWEEDERGPGAPHQNFVLMEALAEKLKILNCDQDLLEKHNMKPLSRHYFVSSP
YLVANPGEQFYVFTVMAAWLINSAGRSFTKPREDDEPAATVANILAELRALGVRVDFPPS
KLKSGSGEHVCFVLNMLAEHALKRRGFSFQRPTYPTETTEEESMIDDHAEPAPDNVDLVA
EEDEDDEENLVDLEALTLQSTLQEATANKPGEILRSALDVAEWNLEVERVLPLLKVTIRT
DNKDWRVHLEQMHRHQDAIKSSLSEAKGYLDKLEEDISRTMEKVSSREKYLNKQLEGVIS
EHRATQAQLSEVKERYRGASGGVAQRTQLLAELCEELEKVKQEMEERGSSMSDGAALVKI
KQSVSKLKQEIMTTDVRAGVVAHMLLQAKLKRKSDMSFRMHAAA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggacggtcgccgcgggtgggaggaggacgaacgcggcccgggagctcctcat
caaaacttcgtgctcatggaggcgctcgcggagaagctgaaaatcttaaactgcgaccag
gacctgctggaaaaacacaacatgaagcccctctccaggcattactttgtgtccagccct
tacctggtggccaacccgggcgagcagttttatgtgttcaccgtcatggccgcctggctc
atcaacagcgcgggcagaagcttcaccaaacctcgggaggacgacgagcccgccgcgacc
gtagccaacatcctggccgagctcagggcgctcggtgtgagggtggacttcccgccgtcc
aagctgaagtccggttcgggcgagcatgtgtgcttcgtcttgaacatgctggcggaacac
gcactcaagaggcggggattctcctttcaaagacccacctaccccaccgaaaccactgaa
gaagaatcgatgatagacgaccacgcggaacccgcacccgacaatgtggacctcgtcgcc
gaggaggacgaggacgatgaggagaacctggtggacttggaggcgctgaccctgcagagc
acgcttcaagaggcgacggcaaacaaacccggcgagatccttcgctcggcgctggatgtg
gccgagtggaacctggaggtggaaagggtcctccccctccttaaagtcaccatcaggact
gacaacaaggactggagggtccacctggagcagatgcaccggcaccaggatgccatcaag
tcctcgctcagtgaggctaagggctaccttgacaagctggaggaggacatcagcaggacg
atggagaaggtgtccagtcgagagaagtacctgaacaagcagctggaaggcgtcatcagc
gaacatcgcgccacccaggcccagctcagcgaggtcaaggagcgctaccgaggtgccagc
gggggcgtggcccagaggacacaactcctggccgagctatgtgaagagttggagaaggtg
aagcaggagatggaggagcgaggcagtagcatgtcggacggagcggcgctggtaaagatc
aagcaaagcgtcagcaagctgaagcaggaaatcatgaccacagatgtgcgtgccggcgtg
gtagcccacatgctgctgcaggccaaactaaagcgcaaatccgacatgagctttcgcatg
cacgccgctgcttga
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