Syngnathus scovelli (Gulf pipefish): 125984662 Help Entry 125984662         CDS       T08785                                  Symbol depdc5 Name (RefSeq) GATOR1 complex protein DEPDC5   KO K20404   SEA/GATOR complex protein SEA1/DEPDC5 Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04150   mTOR signaling pathway Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09132 Signal transduction    04150 mTOR signaling pathway     125984662 (depdc5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sscv04131]     125984662 (depdc5) Membrane trafficking [BR:sscv04131]  Autophagy   Other autophagy associated proteins    SEACIT/GATOR1 complex     125984662 (depdc5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEPDC5_CTD IML1 IML1_N DEP Motif Other DBs NCBI-GeneID:  125984662 NCBI-ProteinID:  XP_049602673 LinkDB All DBs Position 17:complement(11181961..11201228) Genome browser AA seq 1543 aa AA seqDB search MKTNKSYKLVLHKRGFGGNDDEVVVNPKAFPQICLGDIIEIAHPTDEYSPLLLQVKSLKE DLPKETISVDQTVAQAFRLRAYQDVIVNIVDPKDVTLDLMELTFKDQYIGRGDMWRLKKS LVRTCAYVSQKVEYAGIRSQASELWGKGEKVTCGYISDDTRVVFRSISAMVYVFIQMSCE MWDFDIYGDLYFEKAVNGFLSDLFGKWKDKNCSHEVTVVLFSRTFYNAKSKDEFPESFRA SIQQDHEGRFYEDFYRVVAQNERRDEWTSLLVTVKNLFIQYPVLVRLKEADGFPVGYNST SAQGNYLEAINLSFNVFDKHYINRNFDRAGQMCVVITPGVGVFEVDRLLMILTKQRMIDN GIGVDLVCMGEQPLHAVPLFKLHNKATPDSFVGNDYNLPHWINHSFYTSKSQNSCNNFIP RIKLADQKRHYEKLKKGTEQTLCIQKECENGLPIQVDYEAYDSQVFRLPGPSLIQRSPTC RMGRGKEKSGKKICASVEVAIGMGVSPTLCFAGTDEQHSLASDDSLGPVSNMLLIPRMPS MVNEVSSSLGYTCAKEFFEKTVESHRDSSAPARFTVGSAESTLYIQSGGYTPQRALMNPF TPTRMPMKLTSNRRRWMHTFPVDPFGEAFQIHHQTWQNIAELQDSYQRDHAQASAELLEL TYQDTTGRQASYPQADENVFYMRGGMEEYTQSPGNSGATNNSSEFVDSSQCADNQIPSIC CAVGVDWKSLTTPACLPLTTDYFPDRQKLQSDYTEGCYDLLPHSDLERREDDMPGMNATQ VFEEFVCQRLMQGYQIIVPSNKRRRQPSVATPLGSSPLYTRGLISMRRGEEEETVCWLSM GRTFHKVCLKDKILTVTRYLPKYPYESRHIQYSYSLCPPHVDAHFVSCWVEFGHERPEEY KWNYLDQYICSAGSEDFSLIDSLKFWRTRVLLLPAGGARRVADEDGHWDVYGAGSSTGIG SSSDWVLLDGFIRFLEGVNRIRRRHRSDRIIRKGTPMKAMNSLLSYPSEPMVPLQGKKGT SALSALLEMDQNHRTLEEQQQKPKPITPELSSAESPRKITAEYIEGAFQVGLTAGTSMQF AGENATGVSNDTRLAGSNSQFALEDFSLSSSSTLVEILDAIKNPTTGILLLPEQRGLPFN CFISAEVIHWLVTNVEGVTTQSMAVDVMQKMLDEGLVAHASGDAMRTFVYGFYIYRIVAE KDGQASQLPPTVACGWSTAGLEDFALFQRKWFEVAFVFEEQQPTDLPAFLLPWLPSRPAS YASRHSSFSRSFGGRSQSAALLAATVPEQKTVTLDMDAHNRWGRTEWCTCYYHGTFSLNS AFEIKLHWMAVTAAVLFEMIQGWHRKAASCGFLLVPVLEGPFALTSHLYGDPLRAQLFIN LNIHCLMKNGSENLFEGFEPESYWDRMQLFQEAILYRFGFIVDKFSASAFNFPSENRPQY IHVTGTVLLQLPYSKRKYTSGQQRRRRNSTTSNSQGSFSGEDRIGFYWAYNTMLTKAWRT GALGDERLADRLLKDFTDFCANKDNRLLNFWDSCVEKINTSAP NT seq 4632 nt NT seq  +upstreamnt  +downstreamnt atgaagaccaataaatcttacaagcttgttctgcacaaaagaggttttggtggaaatgat gatgaggtggttgtcaatccaaaagctttccctcaaatctgtcttggtgacattattgaa attgcacaccccacagacgaatacagtcccctattgctccaagtgaagagcttaaaagaa gacctcccgaaagaaaccatcagtgtggatcagactgtggcacaagccttcagacttcgt gcataccaagatgtcattgttaacattgttgacccaaaggacgtcactctggacttgatg gaactgacatttaaggaccagtacatcggcaggggtgacatgtggagactgaaaaagagt ttggtgaggacatgtgcctatgtgtcacagaaagtggagtatgctggaatcagatcccag gcaagtgaactgtgggggaagggagaaaaagtgacctgtggatacatcagtgacgacacc agggttgtgttcagatccatatctgcaatggtttacgttttcatccaaatgagctgtgag atgtgggactttgacatttacggtgatttatactttgaaaaggctgtgaacggtttcctt tcagacctttttggcaagtggaaggataaaaactgcagtcatgaagtgacagttgtgctc ttttcacgtacattctacaatgctaaatcaaaagatgaatttcccgagagttttagagca tcaatccaacaagatcacgaaggtcgattttatgaagacttctacagagttgtggctcag aatgaaaggcgtgatgagtggacatctttattggtcactgtcaagaatctctttattcag tatcctgtcttggtgcgacttaaagaagcagatggttttccagttggatataattcaaca tctgctcagggaaactacttggaagccatcaacctttcttttaatgtgttcgacaaacat tatatcaatcgtaactttgaccgggctggtcagatgtgtgttgtcatcacgccgggtgtg ggggtgtttgaagttgaccgtctgcttatgattctgaccaagcaacgaatgattgacaac gggatcggtgttgacttggtgtgtatgggcgaacagccattacatgcagtgccgctcttt aagttgcacaataaagcgacacctgactcctttgtagggaatgactataatctgcctcac tggatcaaccacagcttctacacttccaaaagtcagaattcttgtaataattttattccc cgaattaaacttgctgatcaaaagcgtcattatgaaaaactaaagaaaggcacagaacaa acgttatgtatacaaaaggagtgtgagaacggcttgccaatacaggtggactatgaagcg tatgactctcaggttttcagactccctggtccttcactgattcagagaagtcccacttgc aggatgggtcgggggaaagagaagagtggaaagaaaatctgcgcatcagtggaggttgcc attggcatgggtgtatctcctactttgtgttttgctggtaccgatgaacaacatagtctg gcatctgatgatagtctcggacctgtatccaacatgcttctgataccccgaatgccctct atggttaacgaagtcagtagctcactgggatacacatgtgccaaagagttttttgagaag actgtcgagtctcatcgagactcaagtgcccctgctaggtttacagtgggaagtgccgag tccaccttgtacatacaatcgggaggttatacaccacagagagcgctgatgaatcccttc acaccaaccaggatgcccatgaagctcacatctaaccgcaggcgctggatgcacacgttc cctgttgatccttttggagaagcttttcaaatccatcaccagacctggcaaaacattgca gagttgcaagacagttaccaaagagatcatgcccaggcctcagctgagctgctggaactc acatatcaggacaccacgggcaggcaagcaagctacccacaagcagatgagaatgttttt tacatgaggggagggatggaagaatacactcaaagccctggcaacagtggtgcgaccaac aattcttctgaatttgtcgactcatcccaatgtgctgacaatcaaattcccagcatctgc tgtgcagtgggggttgactggaaatctctgaccacaccggcctgcttgcccctcaccact gactacttccccgatcggcaaaagctacaaagtgactacaccgaaggatgctatgactta ttaccacacagtgatctggaaaggcgagaagatgacatgccggggatgaatgctactcaa gtatttgaagaatttgtctgtcagaggttgatgcagggttaccagatcatcgtcccatcg aacaagaggagacgacaaccctctgtggctactcctcttggcagcagtcctttatacacc agaggtttgatatcaatgcgtcgaggagaggaagaagagacagtttgttggctcagtatg ggtaggaccttccataaagtttgcctcaaagacaagatactcaccgttacgcgatacttg ccaaaatacccgtatgagtcacgtcatatccagtacagctacagtctgtgtcctcctcat gtggatgctcattttgtgtcctgttgggttgagtttggccatgaacgaccagaggaatat aaatggaattacttggaccaatatatctgctctgcaggctcggaggacttcagtttgatc gattcactcaagttctggaggacaagggtcctcttgcttccagctggaggagctcggcgt gtggctgatgaagatgggcactgggatgtttatggagctggatcaagtacaggaataggt agtagtagtgactgggtcctgctggatggtttcatccgcttccttgagggagtcaaccgc attcgccgacgccaccgttccgacaggattatcaggaaaggcactcccatgaaggccatg aattctctcctttcatatccatccgaaccaatggtgccactgcaaggcaaaaaaggaact tcagctttatctgctttactggagatggatcagaaccataggacattagaggaacaacag cagaagcccaagcccataacacctgaactatcaagtgccgaaagtccacgcaagatcacc gctgaatacattgaaggggcattccaagtgggactgacagctggaacatcaatgcagttt gcaggagagaatgcaactggcgtcagcaatgacaccagattagcgggaagtaatagtcag tttgcactggaggacttctccctatcctcttcgtcaacactcgtggaaatcttggatgcc attaaaaatcctacgacagggatactactgctaccagaacagaggggccttccattcaac tgcttcataagcgctgaggtcatccactggttagtcaccaatgttgagggtgtaaccaca cagagcatggctgtcgatgttatgcagaaaatgctcgatgagggtttggtggcccatgca tccggagatgctatgcggacctttgtttatgggttctacatctatcggattgtggcagaa aaggatggtcaagcctcacagctccccccaacagtggcgtgcggctggtctactgcaggc ttggaagactttgccttgtttcagagaaaatggtttgaggtcgcctttgtgtttgaggaa caacaaccaactgatctcccagcgttcctcctgccatggctgcctagtcgaccagcctct tatgcaagcaggcatagctctttcagtcgcagctttggaggacgcagccagtcagctgca ctgctagctgctacggttccagagcagaagacagttactctggatatggatgctcataat cgctggggtcgaactgaatggtgcacctgttattaccacggcaccttttccttgaattct gcctttgagatcaaacttcattggatggctgtcactgcagcagtactctttgagatgatt caaggttggcacaggaaagcggcatcctgtggtttcttattggttcctgtgttggagggt ccgttcgccctgacatcgcacctgtatggcgatcctctgagagctcaactcttcattaat ctgaatattcattgccttatgaaaaatggtagtgaaaacctgtttgaaggttttgaacca gaatcttactgggacaggatgcagctctttcaagaggccatattgtacagatttgggttc atcgttgacaagttttctgcttcagcttttaatttcccatcagagaacaggccccaatac atccatgtaacaggcactgttctactacaactgccatactccaaaagaaagtataccagc ggacaacagcgtcggcgcaggaactccaccacatccaacagccaggggtcattcagtggt gaagatcgcattggcttctattgggcctacaatactatgttgactaaagcctggaggact ggtgctctaggtgacgaaaggctggctgaccgcctgctgaaagactttacagacttctgt gccaataaggacaacagactgctgaacttctgggatagttgtgtggaaaaaattaatacc agcgccccctaa

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