Syngnathus scovelli (Gulf pipefish): 125984714
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Entry
125984714 CDS
T08785
Symbol
acsl3b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00061
Fatty acid biosynthesis
sscv00071
Fatty acid degradation
sscv01100
Metabolic pathways
sscv01212
Fatty acid metabolism
sscv03320
PPAR signaling pathway
sscv04146
Peroxisome
sscv04216
Ferroptosis
sscv04920
Adipocytokine signaling pathway
Module
sscv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125984714 (acsl3b)
00071 Fatty acid degradation
125984714 (acsl3b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125984714 (acsl3b)
09143 Cell growth and death
04216 Ferroptosis
125984714 (acsl3b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125984714 (acsl3b)
03320 PPAR signaling pathway
125984714 (acsl3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sscv01004
]
125984714 (acsl3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125984714 (acsl3b)
Enzymes [BR:
sscv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125984714 (acsl3b)
Lipid biosynthesis proteins [BR:
sscv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125984714 (acsl3b)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of breast milk
125984714 (acsl3b)
Exosomal proteins of breast cancer cells
125984714 (acsl3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125984714
NCBI-ProteinID:
XP_049602765
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All DBs
Position
17:1945997..1953427
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AA seq
709 aa
AA seq
DB search
MKLKEDINPLLLQVFRSVVWVYSMITFIPWYFLSGSNLERARRIKARSISGHPAGPYRAI
DSQRELAAWFHPGVDTLDKVFEYAAKRFPQRDCLGTREVLSEEDELQPNGKVFKKVILGN
YNWLSYAETYRAAKMFGSGLAALGQKPQCNIAIFCETRAEWIVAAQACFMYNFPLVTLYA
TLGPTAIAHGLNETEVTHIITSKDLLQSRLKAILCDIPRLQYVIVVDEKTSGWRDMPRGV
TVRSMDSVKEMGSRIENLATDRRQPQSSDTAVIMYTSGSTGIPKGVVISHGNIIAGITGM
AERIPNLNETDTYIGYLPLAHVLELSAELVCVSHGCRIGYSSPQTLADQSTKIKKGSKGD
TSMLRPTLMAAVPEIMDRIYKNVMTKVEGMSRFQKTLFVLAYNYKMEQISKGYSTPLCDS
LVFKRVRALLGGNTRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGTISEVWD
YSTGRVGAPLVCSEMMLKDWEEGGYYSTDKPNPRGEILIGGPNVTMGYYKNQAKNREDFF
VDGKGQRWFCTGDIGEFDHDGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCPLIDNIC
AYANSDQSYVISFVVPNHKLLMALAERLQVWGTWEEICNNPQIEKEVLRILTEAAISSKL
ERFEIPKKVRLSAEAWTPETGLVTDAFKLKRKELKTHYQEDIERMYGGK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaagaggacatcaaccccttgctcctgcaggtcttccgatctgtggtctgg
gtctactctatgatcaccttcataccctggtacttcctctccggatccaacttggaacgg
gcccgccgcatcaaagcccgctcaattagcggacacccggccggcccgtacagggccatc
gacagccagcgggagctggcggcgtggtttcaccctggggtggacacgctcgataaagtg
tttgaatatgcagccaaacggtttccccagcgggactgtttgggcaccagagaagtgctg
agtgaggaggatgagctgcaacctaacgggaaggtctttaaaaaggtcatactcgggaac
tacaactggctgtcgtacgccgagacctaccgggcagccaaaatgttcggaagcggtctg
gcggcactgggccaaaaacctcagtgcaacattgccatcttttgcgagaccagagccgaa
tggatcgtggctgctcaagcctgcttcatgtacaatttcccactcgtcacactgtacgcc
actctgggacccacggccattgcccacggtctgaacgagaccgaggtcacacacatcatc
accagcaaagacctactgcagagtcgtctcaaggcgatattgtgcgacattccgcggctg
cagtacgtcatcgtagtggacgagaaaacgtccggctggcgggacatgcccagaggcgtc
acggtccgcagcatggacagtgttaaagagatgggatccaggatcgaaaacctggccacc
gaccgcagacagccgcagtcgtcagacactgccgtcatcatgtacactagcggctcgacg
ggcatccccaagggtgtggtcatctcccatggcaacatcatcgccggcatcaccgggatg
gcagaacgaatccccaacctcaacgaaacggacacctacatcggctacctgccgttggcc
cacgttttagagctcagcgccgagctggtgtgcgtctctcacggctgtcgcatcggctat
tcctccccgcagactctcgccgaccagtccaccaaaatcaaaaagggcagcaaaggcgac
accagcatgttgagacctacactcatggccgctgtaccggaaatcatggaccgcatttat
aagaatgtgatgacaaaagtggagggaatgagcagatttcaaaagacgctatttgtgctg
gcgtacaactacaagatggagcagatctccaaaggctacagcacgcctctttgtgacagt
ttggtgttcaagcgggtgcgggcactgctgggcggcaacacgcgcgtgctgctctcgggc
ggagccccgctgtcggccgccacgcagcgcttcatgaacatctgtctatgctgccctgtg
gggcaaggctacggcctcacggagacctgtggagcgggcaccatcagtgaggtttgggac
tacagcaccggacgggtgggcgcacctctagtttgctccgaaatgatgctcaaggactgg
gaagagggaggctactacagcacggataagcccaacccacggggggaaatcttgattggc
gggcccaacgtgacaatgggctactacaaaaaccaagccaagaaccgtgaggacttcttt
gtggacgggaaaggccagagatggttctgcaccggagacatcggggagtttgaccacgac
ggatgcctcaagatcattgaccgcaaaaaagacttggtgaaactacaagctggcgagtac
gtctctttgggaaaagtggaggctgttctgaagaactgtccgctaatagacaacatttgt
gcctatgccaacagtgaccagtcatatgttatcagttttgtggtgcccaaccataaactg
ctgatggcactggccgagcgcttgcaggtgtggggcacgtgggaagagatctgcaacaat
ccacagatagagaaggaagtgctccgcatcctcactgaggccgctatctcgtccaaactg
gagcgctttgagatccccaaaaaggtgcggctgagcgccgaagcctggacgccagagaca
ggcctggtcacagacgccttcaaactcaaacgcaaagagctcaaaacgcactaccaagaa
gacattgagaggatgtacggagggaaataa
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