Syngnathus scovelli (Gulf pipefish): 125984724
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Entry
125984724 CDS
T08785
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125984724 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125984724 (atrx)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125984724 (atrx)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125984724 (atrx)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125984724 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125984724
NCBI-ProteinID:
XP_049602820
LinkDB
All DBs
Position
1:complement(6099091..6125531)
Genome browser
AA seq
1997 aa
AA seq
DB search
MSQPIPESSLDQMAENTEEPCSSAETTHSSSRNKRKSNTVDKVAVQNDSGKSDDSENEAA
TSDSNTGSISKGTLVLRPSGSENKGTLKFRVDYKQKAPDDTLQRKINCTACGKQVNQFQR
NSVYQHPALKVLICKSCYNYYKSDDISKDSDGMDEQCRWCAEGGKLICCDYCNNAFCKKC
ILRNLSRRELSAITDENSKWHCYVCKPEPLQDLISKCNGILAKIDNDKTKQRKSSKGEGR
KSKTCNSSEVKGQKVVVNGKEHADGSGTILFSNKKLQIPKELLKKTKKLVETTTGLNNTF
IQFGRQVAAEQDDKSVRYRHLKAFKAVLSDLKKAHAALEEALEPVFRSMELQNGDKGQHQ
VRKSKDAVHPVDKDDDKVDSTGESDTVQKLHEEHNKEPAAACKTPQEEHPNQDDANQVIE
PKEELVETPCNTLESSPDEEPEQELQKEPVSKGSRAEDFTGNVVKREGGGELLSPGEISL
DHDIMSVPPSVPDELFQMVESLADSHMLTQTDLTSAADAGPKENGRPQQKVKNLIVKLTP
VPTVKTSRSKSSRSKSQEQDEENGGYDTGDEPASPPPNRHSSRVKTTPLRKQAVKNSSES
EEESEKEKSDESTSSKKPSQAKKEDKKRSNTSLSEKDAGDSDSDEVPDILLEKVAECKSS
DEEKEMPSSRKCLFKEKPSADTDQTSKRKRKSEGSESDMESKGKKASKKKKHVSDSTDSE
HDKVRTAKRRSSRVTKQNKSKEQDKPEKKATPVKRSYEKKRKGRSSTAVSKLESSSSENE
EEQQADDDFGDDSDQPMFNSAMEDDGDEMPVKQEAPQIGDDDDDDDDPENRIAKKMLLAQ
IKSNFSSGAESSSENEDEDVNKKPSKKVKEEEDDNEEQQDSEDSSSDVEVKKSGRRHKLL
RQKLSLSEAESDDDKAEKSRKSVKKKREKKKVDSDDSADSDFKKSASSGESVMSEALSES
DNGEKRRKTRASKKKDDEKQKAQKKKRRRIKVQDSSSNEKSGDEDDDDPDGEDRKGRKKI
RKILKDDKLRTETRDALKEEEDRRKRIAEREELRKKLRETIVLEESSEVTCPITTKLVLD
ENEETKEPIVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKIEKSPGSGCILAHCMGLGK
TLQVVAFLHTLLLCEKLNFSTALVVCPLNTVLNWVNEFEKWQHGMKDDECLEVTELATVK
RPQERSFALQQWHDLGGIMIIGYEMYRNLTRGKNTKSKKLKETFLKTLVDPGPDLVICDE
GHILKNEASAVSKAMNSIRTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRF
INPIQNGQCADSTMQDVRIMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLSIRVT
PLQCKLYRYYLEHFTGVGNAMEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENRG
FFDEDSMEEFIASESEESSLSLSSEDEKQKKKKKKGKGRKKGSDDSDSDDVEVIKEWNTS
SRGRNGEGRNRAEPVEEQPEPSGSAPGSPTADWHKEFVTEADAEIMEHSGKITILFEILR
MAEEVEDKVLVFSQSLISLDLIEDFLELSCRAADEDKISPYKGEGKWYRNIDYYRLDGST
NATTRKKWAEEFNDPENTRGRLFLISTRAGSLGINLVASNRVIIFDASWNPSFDIQSIFR
VYRFGQLKTVFVYRFLAQGTMEEKIYDRQVTKQSLSYRVVDQQQIERHFTMNELAELYTF
EPDMLDDPSEKKSKKATPMLPKDLFLAELLQTHKDQIVCYHEHDSLLDHKEEEALSEEDR
KAAWAEYEAEKKGLTMRTNYQVQPQMASSTMFSHYNMAALATMTNQQLEDLINQGRLKVI
EATNALKSLQRDSLEDTIARIWKENASLTESQVQSLAMAQMASVEMEAKRREAIYRETLT
MQQSLMMYVQKVINNRKVQEQQLAMANQTTLLNMALQNGMLGGNRLSHMDLLGLYQQLHG
MNPHAAMGKNPGPSKGL
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcctattcctgaatccagtctagaccaaatggctgaaaacacagaggagcct
tgtagttccgcggaaacaacacactcctcttcccgtaacaagaggaagtccaatactgta
gataaggttgctgtacagaatgactctggcaaatctgacgacagtgaaaatgaagcagcc
acttctgacagtaatacaggcagcatatccaaaggcaccttagtgttgcgcccttcaggg
agtgaaaataaaggcactttgaagttcagagtggattacaaacagaaagctccagatgac
acacttcaaaggaagataaactgcacagcctgtggaaagcaagttaaccaatttcaacga
aactctgtgtaccagcaccctgctcttaaagtgcttatttgcaagtcatgttacaattat
tacaagagtgatgacatcagtaaagactcagatggaatggacgagcagtgcaggtggtgt
gcggaaggcggaaaactaatttgctgtgattactgcaacaatgctttctgcaagaagtgc
atccttcgcaacctgagcagaagagagttatcagccatcactgatgagaactctaaatgg
cactgctatgtgtgcaagcctgaacccctccaggatctgatctccaagtgtaacggcatc
ttagcaaaaatcgacaatgacaaaaccaagcagcgcaaatccagtaaaggcgagggacgc
aagagcaagacgtgtaatagcagtgaagtcaaagggcaaaaagtggttgtcaacgggaag
gaacacgccgacggctcagggaccatattattctctaacaaaaaactgcagatacccaaa
gaactcttaaagaaaacaaaaaagctggttgaaaccacgactggtttaaacaatacattc
atccagtttgggcggcaggttgctgccgagcaagacgacaagtctgtccggtacaggcat
ttgaaagcattcaaggcggttctttctgatctgaaaaaagcccatgctgctttggaagag
gccttggagccagtgttcagaagtatggaactgcagaatggtgacaaagggcaacatcaa
gtcagaaaaagcaaggatgcagtgcaccctgtcgacaaggacgacgacaaggtagactca
actggggaatctgacacggtgcagaagctgcacgaagagcacaataaggagccagcggcc
gcatgcaaaacacctcaggaggagcatcccaaccaagacgatgccaaccaggttattgag
ccaaaggaggagctagtcgagactccatgcaacacactggaaagctcgccggatgaggaa
ccggaacaggaactgcaaaaggaaccagttagtaaaggcagcagagcagaagatttcact
ggaaatgtggttaaaagagaaggtggtggtgagctgctctctcctggtgaaatatcactt
gatcatgacatcatgtctgttcctccttcagttccggacgagctttttcagatggtggaa
agtcttgctgattcccacatgctgactcagaccgatttgacctcggccgcagatgcgggt
ccaaaagaaaatggacgcccccaacagaaagtgaagaacctcatcgttaaactgactccg
gtgccgactgtgaagacaagtaggtcaaagtcttccaggtctaaaagccaagaacaagat
gaggaaaatggtggttatgatacaggagatgaaccagccagcccaccacccaatcggcac
tccagtagagtaaagaccactcctttgaggaagcaagctgttaagaactcctccgaatca
gaggaggagtccgagaaggaaaagagtgacgagtccacatcctccaagaaaccgagtcag
gctaagaaagaagataagaagcggagtaatacttccttgtcggaaaaagatgcaggggac
tctgactcagatgaagtacctgacatattgctggaaaaggtggcagaatgcaaaagtagt
gatgaagagaaagaaatgcccagttctagaaaatgtctgttcaaagagaaaccctcagca
gatacagaccaaacatccaaacgcaagaggaagtcagaaggctcagagtcagacatggaa
agtaaaggcaagaaggcatcaaagaagaaaaaacatgtctccgactctaccgactcggag
catgacaaagtgagaacggcaaagaggcgatcgagccgcgtgacgaaacaaaataaatca
aaggagcaagacaaacccgagaagaaggccacacctgtgaaaagatcgtacgagaagaag
cgcaaaggaaggagctccacagccgtttccaagttggagtcatcctccagcgagaatgag
gaagagcagcaggctgacgacgactttggagacgacagtgaccagccgatgttcaactct
gcgatggaagacgacggtgatgaaatgcctgtcaaacaagaagcccctcaaattggtgac
gacgacgacgacgatgatgatccagagaacagaatcgcaaagaaaatgcttctcgcccag
attaagtcaaatttttcctctggggctgagagctcctcagaaaatgaagatgaagacgtg
aacaagaagccctccaaaaaagttaaagaagaggaagacgacaacgaagaacagcaagat
tcagaagactccagttctgatgtagaggtgaagaagagtggtcgacggcacaagttgctt
cgtcaaaagctctcgctgagtgaggcagagtcagatgacgacaaagcagaaaagagcagg
aagtcggtcaagaagaagagagaaaagaaaaaagtggacagcgacgattcggcggattct
gacttcaagaagtcagcatccagtggggagtcggtgatgagcgaagcacttagtgaatcg
gacaatggcgagaagcgtcgaaagacaagagcttcgaagaaaaaggatgatgagaagcag
aaagctcagaagaagaagagacgtagaatcaaagtacaggattcctccagcaatgagaag
agtggagatgaagacgacgacgacccagatggagaagatcgcaaagggcgcaaaaaaatc
cgcaaaatcctcaaggatgacaagctgcgaacggagacgcgggatgctctgaaagaagaa
gaagataggcggaaacgtatagcggaaagagaagagctgaggaagaaactccgagagacg
attgtgctggaagagtcttccgaagtgacatgtcccataaccaccaagctggttctggat
gagaatgaagagaccaaggagccaatcgtgcaggtgcacagaaacctcgtcaccaagttg
aaacctcaccaagttgatggggtgcagttcatgtgggattgttgctgcgagtctgtgaag
aagattgagaagtcacctggctctggttgcatccttgcccattgtatgggcctaggaaaa
acacttcaggtggtggcatttcttcatactttgcttctttgtgagaagctcaacttttca
actgcactggtggtttgtcccctcaacactgtccttaattgggtcaacgagtttgagaaa
tggcaacatgggatgaaagatgatgagtgtttagaggtcacggagctggccacagtcaag
aggccgcaggagcgatcgttcgctctccagcaatggcacgatttagggggtatcatgatc
attggctatgagatgtaccgaaacctgacacggggaaagaataccaagagtaagaaactg
aaagagacattcctgaagactctggtagacccaggtcccgacttggtgatatgtgacgaa
ggtcacatcttgaagaatgaggcttcagctgtgtccaaagccatgaactccattaggaca
aggaggagggttgtgctgactgggacgcctcttcaaaataacctcattgaataccactgc
atggtgaacttcattaaagagaacttgctcggatccgttaaagagttccgcaatcgtttc
atcaaccccatccagaacgggcagtgtgccgattccacgatgcaagatgtccgtatcatg
aagaagagggctcacatcttgtatgagatgttggctggttgtgttcagaggaaagattac
acggcactcacaaagttcctgcctcccaagcacgagtatgtgttgtctatcagagttact
ccactccagtgtaaactctacagatactacctggagcactttactggtgtgggaaatgca
atggagggaggccgaggccgcgcaggaaccaaactctttcaggatttccagatgctcagc
agaatctggacccatccctggtgccttcagctggattacatcagtaaagaaaataggggt
ttctttgacgaagacagtatggaggaattcattgcctcagagtctgaagagtcgtccctt
agtctgagctcagaggatgaaaagcaaaaaaagaaaaagaagaaaggcaagggaagaaag
aagggatctgatgactccgatagcgatgatgtggaagtcatcaaggagtggaacaccagt
tctcggggcaggaatggagaggggcgaaacagggccgagcctgttgaagaacaaccggaa
ccctctggctcggcaccagggagtcccactgccgactggcacaaggagtttgtcacagag
gccgatgctgaaatcatggaacactctggaaaaatcacaatcctctttgagatcctgcgc
atggcagaggaagtggaagataaagtgttggtgtttagtcagtcccttatctcgttggac
ctgattgaggatttcctggagttgtcttgcagagctgcagatgaagacaagatctcaccg
tacaaaggtgagggcaagtggtacaggaacattgactactatcgtctggatggctccacc
aacgccaccaccaggaagaagtgggctgaggagtttaatgaccctgaaaatacaaggggt
cgtttgttcctcatttccacacgagctggctcgcttggcatcaacttggtggcgtccaac
agagtcatcatctttgatgcctcctggaatccttcatttgatatccagagtatcttcagg
gtgtatcgtttcggccaactcaagacggtctttgtctacagattcctggcacagggcaca
atggaagaaaaaatttatgaccggcaggttaccaaacagtctttgtcataccgtgtggtg
gaccagcagcagattgaaaggcactttactatgaatgaattggcagagctctacacattt
gagcctgatatgctggacgatccctcagagaagaagagtaagaaagccacgcccatgctc
ccaaaggacctcttcctggccgagttgctgcaaacccacaaggaccagattgtgtgctat
catgagcacgactcactgttggaccacaaagaagaggaggccctgagtgaggaggatcgc
aaagcagcctgggctgaatacgaagcagagaaaaagggtttgaccatgaggacgaattac
caggtacagcctcaaatggcctcctccaccatgttctcccactacaacatggcggctttg
gccaccatgaccaaccagcagctggaggaccttatcaaccaagggcgactgaaggtcatc
gaggcaacaaatgcgctgaagagtttacaacgagactcactggaagatactatcgcacga
atttggaaagagaacgccagtcttactgagagccaggtccagtctttggctatggcccaa
atggcctctgtggaaatggaggccaaacgcagagaagcaatttacagagaaactctcacc
atgcagcagtcgctgatgatgtatgtccagaaggtgataaacaacaggaaggtccaagag
cagcaactggccatggccaaccagaccaccctcttgaacatggccctgcagaatggcatg
ctgggaggaaacaggctcagccacatggacctgctgggtctttaccagcagttgcacggc
atgaacccccacgccgccatgggcaagaatcctgggccctccaagggcctgtag
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