Syngnathus scovelli (Gulf pipefish): 125984743
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Entry
125984743 CDS
T08785
Symbol
homeza
Name
(RefSeq) homeobox and leucine zipper encoding a
KO
K24883
homeobox and leucine zipper protein Homez
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125984743 (homeza)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
125984743 (homeza)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homez
Homeobox_KN
HTH_72
Motif
Other DBs
NCBI-GeneID:
125984743
NCBI-ProteinID:
XP_049602859
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Position
17:complement(3541799..3545976)
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AA seq
659 aa
AA seq
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MATFDEQNGRVGAHVAKKFLDSKTTKTVCKVKQEDKHAVKDLHLPARSPESNPGSASSFT
TNHNAVVCLPLVSEELKLVWTHSDQTRELDSIPELVQAFNLFPYPSSLEVNTLARLCSLP
LDKVKVWFMVQRIKYGISWSSEEIEETRRKLSVPYSFDDSTEPSEEAKVIEEKDSVAEPV
LPIVSPQKKKPKCESPDSYKPTKSTSPCFSSTLPPPQDSYFYRPPSDIPSSANAVAAIAA
DAAAPAEVSLDLSGSSPQQHRHGRYKKSKAQLAALRKSFLRENWPAEVELRRLQEETGLS
RNDIRKWFSDSRYQLRVGRGSLAAAQGFSSLPAVGGKHEQQSEPLSLTTQKSALFNPAGK
GQEVARSNVIRNSHFFQAFLSHSLEAFGERDLEAEGYEAMEDLSGDGDSLKDGEQSEEEP
LQLVKPCKLDQQAPPQEPPDACKSSPSSSPSGTPPPEASPYKLPSDNISSASKKSEHSAR
GNNLHLSTASTSRSSGGRPRKTKEQLALLKQHFLRCQWPKSDDYTELVRITGLPRADVIQ
WFGDTRYAVKNGQLRWVKGVRDKFLAELAAQQSNAALPNGSGLSPRVGGSRKRKSQVNGT
GAVCPNVQPLVRYFLSTGSLNEKDLDVLCKKSKMSYQQVRDWFSAQVVGEVHQEPLVAD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttcgatgaacaaaacggcagagtgggagcgcacgtggccaagaagttcttg
gatagcaaaaccacaaagactgtttgtaaagtaaagcaagaagataaacacgctgttaaa
gatttgcatcttcctgccaggtcacccgaaagcaacccaggctccgcatccagtttcacc
accaaccacaacgctgttgtgtgcttgcctcttgtctcagaagaactgaaattggtgtgg
acacattctgatcaaacccgcgaactggactccattccagagctcgtccaagcctttaac
ttgtttccatacccatcgtcacttgaggtcaataccctagcccggctttgctctttgccc
ttggacaaagttaaggtttggtttatggtacagagaatcaaatacgggatcagttggtca
tcagaggagatagaggagacacggcggaaactatcagtgccatattcttttgatgactcc
actgaaccaagtgaggaagccaaagtcattgaggagaaagattctgtcgccgaacccgtt
ttgcctatcgtgtctcctcagaagaagaaaccaaaatgtgaatcaccagattcttacaaa
ccaaccaaatccacttccccgtgtttcagttccacattaccgccgcctcaggattcctac
ttctaccgcccaccaagtgacataccatcaagtgctaatgcggtggctgccatcgccgcc
gatgctgctgctcctgctgaggtgtccttagacctttcgggctcctctccacaacaacac
cgccacggacgctacaaaaagtctaaagctcagcttgctgcacttcgcaagagttttttg
agagagaactggcctgcagaggtggagcttaggcgcttgcaggaggagaccggtttgagc
cgcaacgacatccgaaaatggttcagcgacagccgttaccagcttagagtcggacgagga
agtctggcagcggcccagggcttttctagcctcccagctgtaggaggcaaacacgaacaa
caaagcgaacctctttcactcacgactcaaaagagtgctctttttaatccggcggggaaa
ggccaggaggtagcccgaagcaatgtgataagaaattcacatttcttccaggctttcttg
tctcacagccttgaggctttcggggaacgggatcttgaggcggagggatatgaagccatg
gaagatctgtctggtgatggagacagtctaaaagacggggagcaaagcgaagaagaacct
ttacagttggtcaagccctgcaagctggaccaacaggctcctccgcaggaacctcctgac
gcatgcaaatcctctcccagctcctccccctctggaacgccaccacctgaggcgtcacca
tacaaactgccctcagacaacatcagcagcgcgtcaaagaagtccgagcactcggccagg
ggcaataatctacacctctcaacagcgtcgacatcccgctcatctggcggcagacccagg
aagaccaaggagcagttggctttattgaagcagcacttcctccgctgtcagtggcccaag
agtgacgattacacagaacttgttaggattaccggtttacctcgagctgatgttatccag
tggtttggggacacgcgttacgctgttaaaaacggccaactgcgatgggttaagggcgtc
cgtgacaaattcttggcagagctggccgcccagcagagtaacgccgctttacccaacggc
tcaggattgtctcctcgagttggaggtagccgcaaacgaaaatctcaagtgaatggaacc
ggcgctgtttgcccgaatgtccaaccgttagtacgatattttctctcaacgggctcactc
aacgaaaaagaccttgacgtattatgcaagaaatccaaaatgagttaccagcaagtgcga
gactggttttcagctcaggttgtgggcgaggttcaccaagaacctcttgttgcagattaa
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