Syngnathus scovelli (Gulf pipefish): 125984750 Help Entry 125984750         CDS       T08785                                  Symbol tnr Name (RefSeq) tenascin-R isoform X1   KO K06252   tenascin Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04510   Focal adhesion sscv04512   ECM-receptor interaction sscv04518   Integrin signaling Brite KEGG Orthology (KO) [BR:sscv00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125984750 (tnr)    04518 Integrin signaling     125984750 (tnr)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125984750 (tnr)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sscv00536]     125984750 (tnr) Glycosaminoglycan binding proteins [BR:sscv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125984750 (tnr) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Pur_ac_phosph_N FN3_Tor_3rd EGF_2 EGF_Tenascin Fn3_Dep-1_2nd Interfer-bind DUF4998 NDNF GH101_dom-5 DUF7949 DUF3515 Med3 Motif Other DBs NCBI-GeneID:  125984750 NCBI-ProteinID:  XP_049602876 LinkDB All DBs Position 17:complement(2777785..2813794) Genome browser AA seq 1395 aa AA seqDB search MQLAPSRHVAATVPTPGWILALALFLLLQVATYAAPSGDSKLVRTTRVRRQILDGEASSA SSSDNQTMQQQQQQEQQQQQQPLIFNHVYNINVPMESLCSVDLDASAPPEDGPRAELGSK APAEGPLDPVGPTEYTEQTLDADSQMTFTHRINIPKAACGCPATISIQQLATRVEMLERE LTMLRSQCGSGCCRENQAIGRFDDFPGCNGHGTFSLELCGCICDEGWTGKNCSEPRCPDD CSGQGVCIEGECVCDRDFGGENCSEPRCPADCSGRGLCMDGECVCEDSFAGEDCMVGRCV NDCSDQGQCVNGTCRCRPGYVGEDCSLVYCANNCSKKGICKEGFCMCQDGFAGDDCNSVA PAMNLKVRGVTDRDVELEWEGSVVLTDFLVTYTPSSPGGVQLEIRLPGNSTSCTISELNA GMEYNINVFAVINNSISVPATITVATYLSNPAGLVFKSITETSVEVQWQPSYYSFDGWEI SFIPKDNDGGMTAQLPSTITSFVQTGLRPGEEYTVSLVALRDQGRSQPFTATVTTLIDGP TALIVRDVSDTVAFLEWTPPKAKIDQIVLRYGLVGGEGPRTTFRLQPTLSQYTLQVLRPG SRYKVSVSGVRDGNTSGSISIEFTTALSFFSEIDAPKNLRLISKTSTSLELEWDNSEAQV EAYQVVYSTLAGDQYEKVIVPRNEGATTKTTLTDLLPGTEYGIGISAMRGSNQSTSATMN ARTGLDVPMDLTVTASTDNTITLMWGVVQGPIDFYKVTYTSSSGVTTELTVPRGETTATL TDLEPGTEYTITVAAKRGRQQSNVASIDAFTGIRPVSHLYLSEVTFDSVLVAWSSPAPPA DVFILSYSSADGSDTSKVTLEGSKTRSLVQGLLPSTQYTISLFTIQGDVTSDPITASLTT GMDPPKQMTVSAVAEDIVTISWLKPLAPFEYYKLSYQSAQGRVDSVVIDSDVTNYTLSGL FPATEYEISLNAVRGSQESKMVSASVFTAMDMPSELSALNITPQGALLRWNPPMSKIDNY VLTLTHNQVTADTFLVEGNKQEHQLSNLKPSTSYSVALYATKGPLTSGTVIANLQTPMDA PLNLTASEVNHRSALISWQPPSSEIDNYMLTYKSADGNRKELILDAEDTWIRLEGLPETT EFTVKLQAARGLDTSAVVSTTFTTGSRLFATPQNCAQHLLNGETLSGVYTIYINRDPSQG VQVYCDMSTDEGGWIVFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQRVSAQGR YELRIDMKDGQESVFANYDKFSLGDARNLYKLRIGEYNGTAGDSLTYHQGRPFSTKDRDN DIAVTNCALSYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPF NFRSISSKRRRSAPV NT seq 4188 nt NT seq  +upstreamnt  +downstreamnt atgcaacttgccccgtcacgccatgtggcggccactgtgccaacaccaggatggatcctg gctcttgctctttttctacttctgcaggttgctacttacgccgctccctccggagacagc aaacttgttcggaccactcgagtaaggagacagatcctagatggggaagcgtcctcagct tcctcctcagacaaccagacgatgcagcagcagcaacagcaggagcagcagcagcagcag caacctttaatctttaaccacgtctacaacatcaacgtacccatggaatctctctgctct gtcgaccttgacgcctcagcaccaccagaggatggcccacgtgctgaacttggatccaaa gcccctgcagagggaccattggacccagttggacctacagagtacactgaacagacactg gatgcagacagtcagatgacgttcactcaccgtatcaacatcccaaaagcggcgtgcgga tgtccggcaactatctccatccaacagctcgccaccagagtggagatgctggagagggag ctcacgatgctccgatctcagtgtggatccggttgctgtcgggagaaccaagccattggc cgctttgacgacttcccaggatgcaacggccacggcactttcagcctggagctatgcggc tgcatatgcgacgaaggctggacgggcaaaaactgctcggagccccgttgccccgacgac tgctccggccagggcgtgtgcatcgaaggggaatgcgtgtgcgaccgagatttcggcggg gaaaactgctccgagccccgttgcccggccgactgctcgggccgcggcttgtgcatggac ggagagtgcgtgtgcgaggactccttcgccggggaggactgcatggtcggcaggtgcgtc aacgactgctcggaccaggggcagtgcgtcaacgggacgtgccgctgccgacccggctat gtcggggaggactgttcgttggtgtactgcgccaacaactgcagcaagaagggaatctgc aaggagggattctgcatgtgccaggatggctttgctggcgatgactgcaactccgtggca cctgccatgaacctgaaagtccgaggagtaacagatagggatgtggaactggagtgggaa ggttcggtggtcctgactgattttcttgtgacctacacaccaagcagcccgggaggtgtc caactggaaatccggctacctgggaatagcacatcctgcactatctcagagctgaatgcc ggcatggagtacaacatcaatgtgtttgccgtcattaataacagcatcagtgttcctgcc accattactgtcgcaacctatctctctaatccagctggtttagtcttcaagtccatcact gagacgtcagtcgaggtccagtggcaaccttcctactattcctttgacggctgggagatc agcttcatccccaaggacaacgatggcgggatgaccgcccagctgccgagcaccatcacg tcctttgtgcaaaccggtctgagaccaggcgaggagtacacagtcagcctggtggcactc cgagaccaaggtcgtagtcagccctttaccgccaccgtcacgacactgatcgacggcccc actgcgctgattgtgcgcgatgtgtcagacacggtagcattcctggagtggacgccgcca aaagccaagattgatcaaattgtcttgcgttacggcctcgtgggaggcgagggcccgcgc actaccttccgcctccagcccacgcttagccagtacaccctgcaggtcctacgccccggt tcccgttataaggtgtctgtgagcggcgtgagggacgggaacaccagcggatccatttcc attgaatttacaacggctttatcgtttttctcagagattgacgcgcccaagaacttgcgt ctcatctccaagacctccaccagcctggagttggaatgggacaacagtgaggcgcaggtg gaagcctaccaggtggtgtacagcacgctggcaggcgatcaatacgaaaaagtcattgta ccacgaaatgaaggcgcaaccacaaagaccactctcactgacctgctgcctggcacggag tacggtatcggcatttccgccatgagaggcagcaaccagagcacatcggccactatgaac gccaggacgggtctggacgtgccaatggatcttactgtgacggcatctacagacaacacc atcaccctgatgtggggcgtggtccaaggccccattgacttctacaaagtcacctatacg tcctcctcaggcgtgactactgagttgactgtgccaagaggtgaaaccaccgccactttg acggacttggaacccgggactgaatacaccatcacagtggcagcaaagagggggagacag cagagcaacgtggcttccatagatgccttcacagggatcaggcccgtttcccacctgtac ttgtcggaggtgactttcgactcggtgctggtggcgtggagctcgccggcgccgcccgct gatgtctttatcctgagctacagctcagccgatggcagcgacacctccaaggtgaccctg gaaggctccaagacgaggtcgttggtgcaagggttgcttccctccactcagtataccatc agcctattcacaatacagggggacgtcacctccgatcccattacggcgtccctcacgaca ggtatggacccacccaagcagatgacggtgtccgccgtggccgaggacatcgtgaccatt tcgtggctcaagccactggctccatttgaatattataagctttcctaccagtcagcccaa ggtcgagtggacagcgttgtgattgacagcgatgtgaccaactacactttgtccggtctg ttccctgctaccgagtatgagatcagtctgaacgctgtcagggggagccaggagagcaaa atggtcagcgcctcagtcttcacagctatggacatgccgtcagaattgagcgcactcaac atcactccgcaaggagccctgctgaggtggaacccgccaatgtccaaaattgacaattat gtgctgactctcacgcacaatcaagtgacagctgatacatttttggtggagggcaacaag caagagcaccagctgtccaatctgaagcccagtacgtcctactcggtagccctctatgct accaaaggacccctgacctccggcaccgtcatcgccaacctccaaacaccgatggatgca cctctgaacctgacagccagcgaagtgaatcaccgcagcgctctcatctcctggcagccg cccagctctgaaatcgacaactacatgctcacctacaagtcagctgacggcaaccgtaaa gaattgattctcgacgcagaggacacgtggattcgcctggagggtctacccgagaccacc gagttcaccgtcaagctgcaggcagcgaggggtctcgacaccagtgctgtggtctccacc acctttacgacagggagtcggctgtttgccacgcctcagaattgcgcccagcacctgctg aacggcgagacgctgagcggcgtctacaccatttacatcaacagggaccccagccagggc gtgcaggtgtactgtgacatgagcacggacgaaggaggctggattgtgtttcaacgacgt cagaacggcctgactgatttttccaggaagtggagtgactatcgtgttggctttggaaac cttgaggatgaattctggttaggtttggacaacatccagcgggtgtcagctcagggccgc tacgagctgaggatcgacatgaaggatgggcaggagtcggtctttgccaattatgataaa ttctccctcggagatgccaggaacctctacaagctcaggataggagagtacaatggcacc gctggtgactccttgacctaccaccagggacggcccttctccacgaaagacagagacaac gacatcgctgtcactaactgtgccttgtcctacaaaggagcctggtggtataagaactgc catcgagccaacctcaacggaaagtacggcgagtccagacacagtcagggaatcaactgg taccactggaagggccacgagttctccattccctttgtggagatgaagatgaggccgttc aacttccgcagcatcagcagcaagaggaggcgctcggctccagtatag

DBGET integrated database retrieval system