Syngnathus scovelli (Gulf pipefish): 125984787
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Entry
125984787 CDS
T08785
Symbol
foxc1a
Name
(RefSeq) forkhead box C1-A
KO
K09396
forkhead box protein C
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125984787 (foxc1a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
125984787 (foxc1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Forkhead
Lin-8
Motif
Other DBs
NCBI-GeneID:
125984787
NCBI-ProteinID:
XP_049602950
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Position
17:5615583..5617817
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AA seq
490 aa
AA seq
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MQARYSVSSPNSLGVVPYISGDPGYYRAAAGGGYTGMPAPMNMYTHAAHDQYPAGMARAY
GPYTPQPQPKDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQN
SIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVLKEKE
DRLQKDAPPRQQQQQQQQPQSRDQEQAGTQPVRIQDIKTENGTVTPPQANSPSLSAVPKI
ESPDSSSMSSGSPHSSIPSNRSMVGMETAEQQHHHHQHQHHGQASAQGFSVDNIMTSLRG
SPQGGTELPPSRTGIAPSLSLSYSPSQTSAYSSPCNQNSISTTSNATYHCNMQAMSLYAG
ERASHLAAPSTTVQDETLPDYSVTTTSSSLGHGGLNSGQEGHPHAHQGRLTSWYLNQAGD
LGHLGAAYPAAAAAAAQQQNFHSVREMFESQRIGLNNSPVNGNNSCQMSFPPSQSIYRTS
GAFVYDCSKF
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgctactccgtctcaagcccgaactcgctgggcgtcgtgccgtacatcagc
ggcgacccgggctactaccgagccgcggccggtgggggatacacgggcatgcctgcgccc
atgaacatgtacacccacgccgcgcacgatcagtacccggccggcatggcgcgcgcgtac
ggaccgtacactcctcagcctcagcccaaggatatggtgaaaccgccgtacagctacatc
gcgctcatcaccatggccatccagaactcacccgacaagaaggtgaccctgaacgggatt
taccagttcataatggagcggttccctttctaccgagacaacaagcaaggctggcagaac
agcatccgccacaatttgtctctcaacgagtgtttcgtcaaagtgccacgcgacgacaag
aaacccggcaagggcagttactggaccctggatccggactcgtacaacatgttcgagaac
ggcagcttcttgcgcaggcgacggcgcttcaagaagaaggacgtgctcaaggagaaggag
gaccggctacagaaggacgcgccgcctcgacagcagcaacagcagcagcagcaaccgcaa
tcccgggaccaggagcaggccggcacgcaaccagtccgaatccaggatattaaaacggag
aacggcaccgtgacgcccccacaggccaactcgccgtctttgagcgccgtgcccaaaatc
gagagcccggacagcagcagcatgtccagcgggagcccgcacagcagcatcccatccaac
cgctccatggtgggcatggagaccgcggagcagcaacaccaccaccatcaacaccaacac
cacggccaggcttcggcgcagggcttcagcgtggacaatatcatgacctccctccggggg
tccccgcaagggggaacagagctgcccccctcaaggacaggtatcgccccgtcgttgtcg
ctcagctactccccgagtcagacctcggcgtacagctccccgtgcaaccagaactccatc
tccactacctccaacgccacctaccattgcaacatgcaggcaatgagcttgtacgccggg
gagcgggcgagccacctggccgcccccagcaccaccgtgcaggacgagacgctcccagac
tactcggtcaccaccacctcgtcctccctgggccacggcggcctcaactcgggccaggag
ggccacccgcacgcccaccagggcaggctgacctcatggtacctcaaccaggctggggac
ctgggccacttgggcgccgcctacccggcggcggccgccgctgcggcgcagcagcagaat
tttcactcggtgcgcgaaatgttcgaatcgcagcgaatcggcttgaataactcgccggtg
aacgggaataacagctgccagatgtccttcccgcccagccagtccatctatcgcacttcg
ggagcttttgtatatgactgcagcaagttctga
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