Syngnathus scovelli (Gulf pipefish): 125984869
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Entry
125984869 CDS
T08785
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125984869 (kcnn1a)
Ion channels [BR:
sscv04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
125984869 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Ion_trans
DALR_1
Motif
Other DBs
NCBI-GeneID:
125984869
NCBI-ProteinID:
XP_049603112
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Position
17:11574581..11611496
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AA seq
1036 aa
AA seq
DB search
MRHRYAGAVYQHQIPQQKRASSSSNSNSSNGSSGSKPSGEPDAPVFSLPPPPSSCHHRDR
ASTTDVHRRSLQELPCVSQPTPRAPHGRDTPPRAGSRDSARRERGVTEGGTGEPATLKQE
PWAPAPVFSNCHCSFSTQEATHSQNQHHRVAPPQPSPPFPPPIPPPPSTTSSSSLLFSRE
SKRGDRLGRSANNYQQASIVERCRGGGGAVGQRDHRQLQQQQQQQQQQHCHPRLPQRDSS
PEGICANSQKRCTDRRALEPQTQEQQIPQLRARQQLLVGSSLPINHCASGSGELCRTHQA
PLLQRQQQQQQQQQPPPPPQQQQQQQPPPPPPQQQQQQQQQQQQQQQEQQQQQWQQQQRQ
QHQHQQQKSTPGHHCEARDRNKYARTPAPGDPHGATPPATEQADAAKSSATGSSNHSNSN
SSRESPNYGSSYHLWPESPHKGEERIRIELHKATTEKKKLNHAGSKPSLSESSVRLPQIA
MNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGGEDPSKA
SNESLVREGSGRGGGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTE
TELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYE
RIFFIVLELLVCAIHPIPGQYVFTWKARLAFTYAPSVADADVDIILSIPMFLRLYLIGRV
MLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVC
ERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAV
VARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQ
RKFLQAIHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGT
LEDKLDSVTGSLQALPCLISQAITQQQQDFLDGFVHRFRPASLASERSERSERSWTSTTR
RRRSPSTAPHTSSDSG
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtctatcagcaccagatcccccagcagaagcgagcc
agcagcagcagcaacagcaacagcagcaacggcagcagcggcagcaagccgagcggggag
ccagacgcgcctgttttcagcctgccgcccccgccctcttcttgtcaccaccgcgaccgc
gcttcgactaccgacgttcaccggcggagcctccaggagctcccgtgcgtgagccagccc
acaccgagagcgccgcacggcagagacacgccgcctcgggcgggctcccgcgacagcgcc
cgccgagagcgaggcgtcaccgaaggcggcaccggggagccggccactttgaagcaggag
ccctgggccccggccccggttttttcgaactgccactgcagtttttccacgcaggaggcg
acccattcacaaaaccagcaccatcgcgtcgcaccaccgcagccctccccacctttcccc
ccgcctataccgccaccaccgagcaccacctcctcctcctcactgctgttttctcgggaa
tccaaacggggtgatcgtctgggaaggagtgccaataattaccaacaggcaagcatcgtg
gaacgctgcaggggaggaggaggagcagtggggcaacgagaccacaggcagttgcagcag
caacagcagcagcagcagcagcagcactgtcatccaagactcccacagagggactcctcc
cctgaaggaatctgtgcaaactcacagaaaaggtgcactgacagaagagcgctcgagcct
cagacgcaggagcaacagataccacaattaagagcgcggcagcagctactagtgggcagt
agcttgcctatcaaccactgcgccagcggctctggtgagctatgtaggactcaccaagct
ccactgctgcaacggcagcagcagcagcagcagcagcagcagccgccgccgccgccgcag
cagcagcaacagcagcagccgccgccgccgccgccgcagcagcagcaacagcagcaacag
cagcaacagcaacagcagcaggagcagcagcagcagcagtggcagcagcagcagcggcag
cagcaccaacatcagcagcagaagagcacaccggggcatcactgtgaagcccgagaccgc
aataagtacgcgaggacccccgcaccaggcgacccgcacggcgcaacgcccccggcgaca
gagcaggcagacgcggccaagtcgagcgcgactggcagcagcaaccacagcaacagcaac
agcagcagagagagccccaactacggctccagctatcacctgtggcccgagagcccgcat
aaaggagaggagaggatacgcatcgagcttcacaaggccactactgagaagaagaagctg
aaccatgctggatccaagccctccctctccgagagcagcgtacgactccctcagatagct
atgaacacctgcaagtacaatggcggcgtggtgagaccactcgtgggcagtctggcgtcc
tcgtcgcgccgcaacctcgcggagcttgactcggaaacgcagcccctgcagacgctgcac
agctctggcctggaggtggtggtgtccaagggaaatggcggtgaagaccccagcaaggcg
tccaacgaaagcttggtcagggagggcagcgggcgcggcggaggcagggcgccccaaaag
aaaaacagagacatcggctacaaactgggccaccggagagcgctgtttgagaagcggaag
cgtcttagtgactacgcgctcatctttggaatgtttgggatcgttgtcatggtgacggag
actgaactgtcatggggggtttacacgaaggaatcttcatattcatttgcactgaaatgc
cttatcagcctttccactgttatactgcttggtcttataataatgtaccatgcacgggaa
atccagctgtttatggtggacaacggtgcagatgactggaggatagccatgacctatgag
cggatcttcttcatcgtgctggagctgctggtgtgtgccatccatcccatccccggccag
tacgtcttcacgtggaaggcccgtctggcttttacgtacgcgccatccgtggcggatgcc
gacgtggacatcatcctctccatccccatgttcctgagactctacctgatcggcagggtc
atgctacttcacagcaagctgttcacggacgcttcgtctcgcagcatcggcgccctcaac
aaaatcaacttcaacacgcgctttgtcatgaaaacgctcatgaccatctgcccgggaact
gtgctgctagtgttcagtatatcgtcctggatcattgctgcatggaccgtgcgcgtctgc
gagaggtatcatgacaaacaggaagtgacgagtaactttctgggagccatgtggctcatc
tcaattaccttcctctccattggctacggggacatggtaccacacacgtactgtggaaaa
ggcgtgtgtctgcttacagggattatgggagctggctgcactgcacttgtggttgcagtg
gtggccaggaagctggagctgaccaaggcagagaagcacgttcacaacttcatgatggac
acgcaactctgcaaacgagtaaagaacacagctgccaatgtactcagggaaacatggctc
atctataaacacaccaagttggtcaagaagattgatcacgccaaggtgcggaaacaccaa
cgcaagtttctccaagccattcaccaagctcagaaactgcgtagtgtgaagatggagcag
aggaagctcaacgatcaggccaacaccttggtggacctggcgaagacccagaatgtgatg
tacgacctggtgtcagaactccaggagcgcagcgaggagctggacaagcgaatcggcaca
ttggaggacaagctggactctgtgacgggcagcctgcaggcgctgccctgcctcatctcc
caagccataacccagcagcagcaggacttcctggacggctttgttcaccgcttccgaccc
gcctcgctagcctccgagcgctccgaacgctcagagcgttcgtggacgtccaccacccgc
aggcggcgctcgccgtccaccgcaccgcacacctcctccgatagcggataa
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