KEGG   Syngnathus scovelli (Gulf pipefish): 125984888
Entry
125984888         CDS       T08785                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sscv03036]
    125984888 (kdm4ab)
Enzymes [BR:sscv01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     125984888 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     125984888 (kdm4ab)
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125984888 (kdm4ab)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN PHD_2 zf-HC5HC2H PHD Tudor_5 ADH_N Rad9_Rad53_bind PHD_4
Other DBs
NCBI-GeneID: 125984888
NCBI-ProteinID: XP_049603142
LinkDB
Position
17:11661117..11670437
AA seq 1120 aa
MASDTAPPNCGSKGIMTFYPTAEEFKNFSRYVAYMESQGAHKAGLAKVVPPKEWKPRHTY
DDIDDLVIPAPIQQVVTGQSGLFTQYNIQKKSMSVKEFRKLANTDKFCTPHYDDFDELER
KYWKNVTFNPPIYGADVGGSLYNPDIKEWNICHLNTILDTVESESGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYCVPPEHGRRFERLAQGFFSGSAQTCEAFLR
HKMTLISPSILKKYGIPFEKITQYAGEFMVTFPYAYHAGFNHGFNCAESTNFATQRWIEY
GKQAVLCSCRKDMVKISMDVFVKKFQPDRYQLWLAGRDTAPIDHSRPTPEAKEFLGDSFN
VIYNTSSCSVDCGWDDVERKSPLQRIETKRHRVCLQLPDEVVPKDSDEEMTLYVKRPRLN
LLPPRITSQDGKRNKGPPKLVVTPTKLTLIDPFHRLNTSDSGHTPHYSKTRPPAFSSHSQ
NGHLSTSATWSSATGQPSRKMGVASLLFHRTLTQKDILQVHNYPRAKQPVHTMLQVHSYA
REHQPRHLQVSGTTPPASQAPGSGSTESDPQSPIALSEVEVAPTENSVEDHTPGVSVSVD
DQDATVKAIAKSTAVTQPTHVDQVEMLKNQNKRKVSEEQSYCMSVVTKKKQQEALRKLPR
HHPLLREAYSDDDVYVDVDVDQEEKEEWAKPLGRLWQSRPLSPQVEWEYNKRMGKQAPYC
SICVLFYTHHQSEAGNSSSSVTLVNRQGHQWSKPLIPEMCFNTYTNKATDSGEGQLSNPH
ITEDGFSRLVSCSQCCVRVHTSCYGVTRDEAEQDDWLCARCKADATFEDCCLCSLRGGAL
HRANNDKWVHVLCAITVLEARFVNITERCPIDLSAIPLPRFRLKCVFCRKRMKRESTGCC
VQCSHGRCSTAFHPSCAQAAGVLMHPDDWPFIVFITCHRHKAAGIIERNKDSMRELSVGQ
RVICKYRNGRYYHSDVVGLTSATFYEVVFDDGSYSDNLFPEDIENRDCARLGPPAKGAAV
SVRWTDGLLYGGKFVAAHSIPMYLVEFEDESQISVKREDVYTLDEDLPKRVKSRLSVASD
MRFELFSQDDVKQNSKRQRVINSRYREDYIEPVIYRAIME
NT seq 3363 nt   +upstreamnt  +downstreamnt
atggcttcagacacagctcccccaaactgtggctccaaggggatcatgacattttacccc
actgctgaggagttcaagaatttcagccgatatgtcgcctacatggagtcacaaggagca
cacaaagcaggcctggccaaagtggtcccaccaaaggaatggaagccgagacatacatat
gatgacatagacgatttggtgattcctgcacccattcagcaagtggtgacaggccagtcg
ggccttttcacgcagtacaatattcagaagaaatcaatgtctgttaaagaattccgcaag
cttgcaaacaccgacaagttctgtacccctcactatgatgattttgatgaactggaaaga
aagtactggaagaacgtgacatttaatcctccgatatacggggccgatgttggtggcagt
ctatacaatccagatatcaaagagtggaacatttgtcatctgaataccattttggacacg
gtggagtctgaaagtggcatcacaatcgagggtgttaatacaccctacctgtattttggt
atgtggaagaccacctttgcgtggcacactgaggacatggacctctacagtatcaactac
ttgcactttggagaacccaaatcctggtactgtgtccctccagagcatgggagacgattt
gagcgtctggctcaaggcttcttttctggcagtgcacaaacttgtgaggcctttctgagg
cacaagatgaccttgatatcaccttcaatactgaagaaatatggcattccgtttgaaaag
attacccaatatgccggcgagttcatggtcacgttcccttatgcttatcatgctggcttc
aaccatggtttcaactgtgccgaatccaccaatttcgctacacagaggtggattgaatat
ggcaagcaagcagtcttgtgttcatgccgcaaggacatggtgaagatctccatggatgtg
tttgtcaaaaaattccagcccgatcgctaccaactgtggctggcaggacgagacacggcg
cccatcgaccactccaggcccaccccggaggccaaagaattcctgggcgattcttttaac
gtcatctacaacaccagcagttgttccgttgattgcggatgggatgacgtagagcggaaa
agtccactgcaaagaattgagaccaagagacaccgggtgtgtcttcagctgcccgacgaa
gttgttcctaaagattcagatgaggaaatgacactgtatgtcaagcggccaagactgaat
cttttgccaccacgcataacgtcgcaagatggcaagcgaaataaaggtccaccaaagttg
gttgtcacgccgacaaagctgaccttgatcgatccgtttcaccgcttaaacacttccgat
tcggggcacacgcctcactacagcaagacccgtccgcctgcattttcatcccattcccaa
aacggtcatctgtcaacctcggcaacgtggtcgagcgccacggggcaaccttcccgtaaa
atgggggtggccagcctgctcttccatcggaccctcactcaaaaagacatcctgcaagtg
cacaactacccgcgagcaaaacagccggttcacaccatgctgcaggtgcacagctacgcc
agagagcatcaaccgcgccatctccaggtctcaggcaccacgccgcctgcatctcaggca
ccgggcagcggaagcactgagtcggatccacaatcaccaatcgctctcagcgaagtagag
gtcgcgccaacggaaaattccgtggaggaccacacgccgggtgtttcggtgtccgttgat
gatcaggacgcaacggtaaaggccattgccaagagcacggccgttacacagcccacccat
gtcgaccaagtggagatgctgaagaaccaaaacaaaagaaaggtgtcagaagagcagtcc
tactgtatgtcagtggtcaccaagaaaaagcaacaagaagccctcagaaaacttccacgg
caccatcctctcctcagagaggcatacagcgatgatgacgtgtacgtggatgtggatgtg
gatcaagaagagaaagaggagtgggcaaaaccacttgggcggctgtggcagtctcgacct
ttaagcccccaggtggagtgggagtacaataagagaatgggtaaacaggctccttactgt
tccatctgcgttcttttctacacccaccatcagtctgaagccggcaacagcagttccagt
gtgacgttggtgaaccgccaaggtcaccagtggtccaaacccctcattcctgaaatgtgt
tttaacacgtacaccaacaaggccactgatagcggggaaggccagctgtccaacccacac
atcacagaggacggcttcagccggctggtcagctgctcgcaatgctgcgtccgagtacac
accagttgctatggtgtaaccagagacgaagcagagcaggatgactggctgtgcgctcgc
tgcaaagctgatgccacctttgaggactgctgtctgtgttctctccgaggcggcgcgctg
cacagagccaacaatgacaagtgggttcatgtgctgtgcgccatcactgtgctcgaagct
cgctttgtaaacatcacagagcggtgtcccatcgatctgtctgcgatcccgctgcctcgc
ttcagactgaaatgcgttttctgcaggaaacggatgaagagggagtcgacaggctgctgc
gtgcagtgctcccacggacgctgctccacggccttccaccccagctgcgcgcaggccgcc
ggcgtcctcatgcacccggatgactggccgtttattgtcttcatcacctgtcaccggcac
aaagccgcgggcattattgagcgtaataaggactccatgcgagagctgtcagtgggccag
agggtgatatgtaaatacagaaacggtcgttactaccacagcgacgtggtgggcctgacc
agtgccaccttctacgaggtggtgtttgacgacggctcgtatagcgacaaccttttccca
gaggacattgagaatcgggactgcgcacgacttgggccgcctgcgaagggtgctgccgtg
tcagtacgatggactgacggattgttgtacggcggcaagtttgtggcggcccactccatc
cccatgtacctggtggagtttgaagatgaatcccaaatttccgtcaagcgtgaagacgtg
tacaccttagatgaagatctgcccaaacgggtcaaatcgcgattatcggtggcgtcagac
atgcgcttcgagctcttctcgcaggacgacgtcaaacagaactccaaacgacaacgggtc
atcaactcccgttacagagaggactacatcgagcccgtcatttatcgggccattatggag
tga

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