Syngnathus scovelli (Gulf pipefish): 125984911 Help Entry 125984911         CDS       T08785                                  Symbol cop1 Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism sscv  Syngnathus scovelli (Gulf pipefish) Pathway sscv04115   p53 signaling pathway sscv04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:sscv00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     125984911 (cop1)  09140 Cellular Processes   09143 Cell growth and death    04115 p53 signaling pathway     125984911 (cop1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:sscv04121]     125984911 (cop1) Enzymes [BR:sscv01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      125984911 (cop1) Ubiquitin system [BR:sscv04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     125984911 (cop1)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      125984911 (cop1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_EML_2 zf-C3HC4_2 WDR55 Beta-prop_RIG_2nd EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_2 zf-RING_UBOX Beta-prop_EML Beta-prop_DCAF4 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N WD40_RFWD3 WD40_like Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_Vps41 zf-RING_10 zf-rbx1 UvrD-helicase Prok-RING_4 zf-Nse Sina_RING Motif Other DBs NCBI-GeneID:  125984911 NCBI-ProteinID:  XP_049603183 LinkDB All DBs Position 17:10782117..10789915 Genome browser AA seq 711 aa AA seqDB search MMSNRRSPQIAGGATSGPSTSSSTSSSSGTGGTVNPSGGSNSVTSNGNSSVTSVSSRTLA TAGDSGMSVPNLVAVSSSRGGFASLIRPSASSSSRKRSLHQAPLCNGLLNSYEDKSNDFV CPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYTVDNVDQLYPNFLVNELILK QKQRSEEKRLKLDQNGSRWHVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQ RQILMEFLNEARRNKREQLEQLQKEINFLEEDVKRVEEMSGLYSPVEAECTVPNVEAPSP SASCSSIMEPPNYNQPPEFGVTTQGKKQTWYNSTLASRRKRLTAHFEDLEQCYFKMSRIS DEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAG VTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDG FTGHRSKVYQEHEKRCWTVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVACIETKANVCC VKFSPTSRYHLAFGCADHCVHYYDLRNIKQPLMVFKGHRKAVSYAKFVNGDEIVSASTDS QLKLWNVNKAHCLRSFKGHINDKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKF DTVKSVLDKEKKEDDINEFVSAVCWRTLPDSESNVLIAANSQGTIKVLELV NT seq 2136 nt NT seq  +upstreamnt  +downstreamnt atgatgtcaaataggcgctccccgcaaatcgctggaggtgcgacttctgggcccagcaca agtagcagcactagtagcagcagtggtactggaggaaccgtgaacccaagtggtggaagc aattctgtcacaagcaatggaaacagctcagttactagtgtgtcctctcggacactggca acagcgggtgacagtggcatgtcggtgccaaatttggtcgccgtgtcatcaagccgaggt gggttcgcttctctgattagaccttccgcgtcctcaagcagcaggaagaggtccctccac caggcacctctctgcaacggcttgttgaactcctatgaggacaaaagcaacgattttgtc tgccccatttgctttgaaatgatcgaagaggcacacatgaccaagtgtgggcacagtttt tgctacaaatgcatccgccagagtctggaggatagcaacaggtgtcccaaatgcaactac actgttgataacgtggatcaactttacccaaactttcttgtaaatgaactaatcctgaaa cagaagcaaagatcagaggaaaagagacttaaactagatcaaaatggatccaggtggcat gttttccaggatgtgttgagtccggaccaagagaacctggacctggcaaatgtcaatcta atgttggagctattggttcagaagaagaagcagctggaggcggaatcccaagcagctcag agacaaattctcatggagttccttaatgaagccaggagaaacaagagagagcaactagag caactgcagaaagaaataaacttccttgaagaggacgtaaagcgtgttgaggaaatgagc ggactgtactctccagtggaggcagagtgtacagtgcccaatgtcgaggccccctcaccc tcagccagctgcagtagcataatggagccaccaaactataaccagccaccagaatttggt gtaacaacccagggcaaaaagcagacatggtataacagcacgctagcatcaaggaggaaa aggttgactgctcattttgaagatcttgagcagtgttacttcaaaatgtcacgcatctca gatgaagggaggaacttgaaccagctggatgacttcatggagtgtctctctaagttcaca cgctacaattctgtgcgacccctggccacgctctcctacgccagtgacctctataatggg tctagtattgtctccagcattgagtttgaccgcgattgtgactactttgctatcgctggt gtgaccaagaagatcaaggtgtttgaatacggtactgtgatccaagatgcagtagacatc cactaccctgtcaatgaaatgacatgtaattcaaaaatcagctgtatcagctggagcagc tatcataagaacctcctggccagcagcgactatgaggggacagtcatattatgggatggc tttactggtcataggtccaaagtgtaccaggagcatgagaaacggtgctggactgttgac tttaatctgatggacccaaagttgttggcatctggctctgatgatgctaaagtgaagttg tggtcaactaatctggacaactctgtggcctgcattgaaaccaaggccaatgtctgctgt gttaaattcagtccaacatcccggtatcatctggcctttggctgtgcagatcactgtgtc cattactatgacctccgcaatattaagcagccactcatggtgttcaaaggccaccgaaaa gctgtttcctacgctaagtttgtcaatggagatgagatcgtgtctgcgtcaacagacagt cagttgaagctgtggaatgtcaacaaagctcattgtctgcgctccttcaagggtcacatc aatgataagaactttgttggcctggcttccaatggagactatattgcctgtggcagtgag aacaattccctgtacctgtactacaaaggactttccaagacacttttaacattcaagttc gacacggtgaaaagtgtgctggataaagagaagaaggaagatgacatcaatgagtttgtc agtgctgtctgttggaggactttacccgacagcgagtcaaatgttttgattgctgcaaac agtcaaggaacaatcaaggtacttgagcttgtctga

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