Syngnathus scovelli (Gulf pipefish): 125984930
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Entry
125984930 CDS
T08785
Symbol
wdr47a
Name
(RefSeq) WD repeat-containing protein 47
KO
K24746
WD repeat-containing protein 47
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125984930 (wdr47a)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125984930 (wdr47a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
LisH_TPL
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_TEP1_C
TPR1-like_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
125984930
NCBI-ProteinID:
XP_049603221
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All DBs
Position
17:7607708..7613925
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AA seq
920 aa
AA seq
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MPVVTMTEEETINVKEVEIIKVILDFLHSRKLHISMLALEKESGVINGLYSDDMLFLRQL
VLDGQWDEVLQFIQPLECMEKFDKKRFRYIVLKQKFLEALCVNNAMSAEDEPQHLEFTMQ
EAVKCLHTLEEFCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVQCFEEACVMVAEF
IPADRKLSEAGFKASGDRLFQLLLKGVLYECCVEFCQSKATGEEITESEVLLGVDMLCGN
GCDDVDLSLLSWMQNLAHSVFSCAFEQKQLNIHVDRLVKPAKTGYADLLTPLISKLSPYP
SSPLRRPQSADTYMSRSLNPALDGLSYGLSNQDKRASGGEVAPGKGVSPMSHSFANFHYP
GAGGQNLSRSLMMESSDCHSIFEESPETSRTDTPVDSMMASSAAQNSRPASAPGEDAPPV
GSAEQNELLDSAEKYEEYYRQRLRVQQHLEQKQQQRQMYKQMLLEGGVQPEPPPSDLQHS
LTEKFLNRSIQKLEELNVGMEDLGDEVKSLAQQCNGNTPASECNNNPPSVSLEHNRSRGG
GLLSSTPQHVAGGHLVSPPNESPVIQQSGQNHKAGSQGDSPGSLSRSTEGGEKEKRLFVP
VHTLEDTQAVRAVSFHPSGALYAVGSNSKTLRVCAYPETLDPSGSSPMKQPVVRFKRNKH
HKGSIYCVAWSHCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEG
PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVR
FWDLRVPTCVRVVGTAFHGSGSPVASVAVDPSGRLLATGQEDSACMLYDIRGGRIVQVYR
PHGSDVRSVRFSPGAHYLLTGSYDTKVLVTNLQGDLTKQLPVTLVGEHGDKVIQCRWHTE
DLSFLSSSADRTVTLWTHNP
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcaccatgacagaggaagaaaccataaacgtgaaggaggtggagatcatc
aaggtgatcttggacttcctccactccaggaagttgcacatcagcatgctggctctggaa
aaggagagcggcgtcatcaatggcctctactctgacgacatgctttttctcaggcaactc
gtgctggatggtcaatgggatgaagtcctgcaatttattcagcctttggagtgtatggag
aagtttgacaaaaagaggttccgttatatcgtgctaaagcagaagtttctggaagcgctg
tgtgtgaataacgccatgtctgctgaggatgagccacaacatttggagttcaccatgcag
gaagcagttaagtgtctgcacaccctcgaggagttctgcccttcaaaagacgactacagc
aaactatgtctactgctcaccttgcctcgcctcacaaaccatgctgagtttaaggactgg
aacccgagcacggcccgggtgcagtgttttgaagaggcttgcgtcatggtggccgagttc
atcccggcggatagaaagctgagtgaggctggattcaaagccagcggggatcgcctattc
cagctgctcctcaaaggagtcctttatgagtgctgtgtggagttctgccagagcaaggca
acaggcgaagagatcaccgagagcgaggtcctgctgggcgtggacatgctgtgcggcaac
ggctgtgacgacgtggacttgtccctgctgtcctggatgcagaacctggcccacagtgtc
ttctcctgcgcctttgaacagaagcagctcaacatccacgtggaccgtctggtcaaaccg
gccaagaccggctacgccgacctgctcacgccgctcatcagcaagctgtctccgtatcca
tcctcgcccctacggcgcccccagtcggccgacacctacatgtcgcgctctttaaatccg
gctctggacgggttgtcctacgggctgtccaaccaggacaagcgagcgagtggcggcgag
gtcgcaccgggtaaaggcgtctcccccatgtctcactcttttgcaaatttccactacccc
ggagcaggcggtcagaacctcagcaggagtctcatgatggagagctctgactgccatagc
atttttgaggaatcaccagaaacgtcaaggactgacacgcccgtggatagcatgatggct
tcaagcgcagctcaaaactcgcgtcccgcctcggcacctggagaggatgcaccaccggtt
ggctctgctgaacagaacgagctcttggactccgccgagaagtacgaggaatattaccgt
cagcgcctacgtgtgcaacagcacctggagcagaagcagcagcagaggcagatgtacaag
cagatgttattggaaggcggcgtgcagccggaacctccacccagtgacttgcagcacagc
ctcacggagaagtttctcaacaggtccatccagaagctggaagagctcaatgtgggaatg
gaggatttaggggatgaggtgaagtcgttggcccagcagtgcaacggcaacacgcccgcc
tccgagtgcaacaacaaccccccttctgtcagcctggagcacaacaggagccgcgggggc
gggctgctcagcagcacgccacagcacgttgcgggtggccatctggtctcgcccccaaat
gaatcccccgtcatccaacagagcgggcagaatcacaaagcaggttcacaaggtgattca
ccgggatcattatcccgcagtacagagggtggcgagaaagaaaaaagactgttcgtaccc
gtgcatactctcgaggacactcaggctgtccgtgccgtttccttccacccgtctggggcc
ctctacgctgtaggctccaactccaaaacactccgcgtctgcgcttatccggaaacgctt
gaccccagtggctcaagtccaatgaagcagccggtggtccgtttcaagaggaacaaacac
cacaaaggttcaatctactgcgtggcttggagccactgtgggcagctcctggcgactggc
tccaatgacaaatatgtcaaagttctaccgttcagtgcggagacctgcaacgccacaggc
cctgacttggagttcagcatgcacgacggaaccatcagggacttggccttcatggaaggc
ccagaaagcggaggggccatcttgatcagcgccggagcaggagactgcaacatctacacc
accgactgccagcgagggcaaggcctgcacgccctcagcgggcacacgggtcacatcctg
tctctttacacgtggggcggctggatgattgcatccggctcccaagacaagacggtgcgt
ttctgggaccttagggtgcccacctgcgtgcgagtggtgggcacagccttccacggctca
ggcagccccgtggcctcggtcgcggtggacccaagtggccgtctcctagcgacgggacag
gaggacagcgcttgcatgctgtatgacatccggggagggcgcatcgtgcaggtgtaccgc
ccccacggcagcgacgtgcgctcggtccgcttctctcccggcgcgcactacctgctcaca
ggctcctacgacaccaaagtcttggtcaccaaccttcaaggtgacctgaccaagcagctg
cccgtgacactggtgggggagcacggcgacaaggtgatccaatgccgctggcacaccgag
gacctctctttcctgtcatcatccgccgaccgtactgtcacgttgtggactcacaaccct
tga
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