Syngnathus scovelli (Gulf pipefish): 125984985
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Entry
125984985 CDS
T08785
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125984985
04121 Ubiquitin system [BR:
sscv04121
]
125984985
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125984985
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125984985
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125984985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
DUF8608
zf-Nse
DUF7560
HypA
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
125984985
NCBI-ProteinID:
XP_049603314
LinkDB
All DBs
Position
17:7819831..7823097
Genome browser
AA seq
313 aa
AA seq
DB search
MSSGEMAEATLPSCRFFCHRCSAEISPRLPDFTCPRCESGFIEELPNERRIENTDSTPST
SSAREQTQPTFQPTMNHQHLFTFPTGYSPFTLGIFNENFELRTWLPTEDNRATEIQREQE
MDPQQTRGRHAAQRQGTRQEGVPTLEGIIQQLVNGIIAPTAMPNIGMGSWGILHSNPMDY
AWGANGLDAIITQLLNQFENTGPPPADRERIKSLPTVCITEEHVGAGLECPVCKEDYHVD
ESVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLNGQNTATNPPGLSEMNFSPSSSSSSS
SNSPSNENASGNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtggagaaatggctgaagctaccttaccgtcttgccggtttttctgccaccgg
tgttcagcagaaataagccctcgtttaccggactttacctgtccacgctgtgagtctgga
ttcattgaggaattaccaaatgaaaggagaattgaaaataccgatagcactccatctaca
tcctctgcaagggaacagacacaacctacctttcagccgaccatgaatcaccagcacttg
ttcacctttcctactgggtacagtccgttcactctgggaattttcaatgaaaactttgaa
ctcagaacttggctacccacagaagataacagagcgacagaaattcagcgggagcaagaa
atggatccgcagcaaacgcgggggcgacatgcggctcaacgacagggtacacgccaggaa
ggagttcccacattagagggaattatccaacagctagttaatgggatcatagcgccaacg
gccatgccgaatattggaatgggatcatggggtatacttcattcaaacccaatggactat
gcctggggagcaaatggactggatgccatcataacacagctactcaaccagtttgaaaac
acgggtcctcctccagcggatagagaacggatcaagagtttgcccacagtctgcatcaca
gaagaacatgtgggcgctggtttagagtgtcccgtgtgcaaagaagattaccatgtggac
gagagcgtcaggcagctgccatgcaatcatttgtttcacaatgactgcatagttccttgg
cttgaacagcatgatacctgcccagtgtgtaggaagagtcttaatggccagaacacagcc
acaaacccaccgggtttatcagagatgaacttctccccctcctcatcgtcctcttcctct
tccaactcacctagcaatgaaaatgcttctggcaactcatag
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