Syngnathus scovelli (Gulf pipefish): 125985002
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Entry
125985002 CDS
T08785
Symbol
ssx2ipa
Name
(RefSeq) synovial sarcoma, X breakpoint 2 interacting protein a isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
sscv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125985002 (ssx2ipa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125985002 (ssx2ipa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125985002 (ssx2ipa)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
125985002 (ssx2ipa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Motif
Other DBs
NCBI-GeneID:
125985002
NCBI-ProteinID:
XP_049603377
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Position
17:11989716..11994620
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AA seq
613 aa
AA seq
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MGEWWTTATGDASMDQQSTSYSRFNAILGFVSSGAYEISSISHVTMSPSRQNNLESLQLS
FKNSYNLLTVFCTDDNIPQCISYINQELSSLGLSSFMELRSAGAAGLSAVPALNAAFELL
QIHRRTMATLEELEKEHYKRSSTLDHMQMSNSRLRDQLELSIREKSGLHETERQLQLKIK
TLQSCLKTEKDEVQKLHSIVASRASQYNHDAKRKERESAKLKERLSQLLVDRRDRKLAID
VLNCIGRADGKRSHWKTAKVTASHEGQMFKSMLRDYEASQRSLMLENGELKKVLQQMKKE
MVHIVSPRQAPCRGAGTDDSKEALDSDGEEKTGDSSKEILDRSCDPAREELTNSIRQQWR
KVRSHMEKLDHQVKNQVESNKEVIPRETHEDEMERMRREVQQCKEFIHTQQQLLQQQLNG
SFDDETAELLSDCYTLEEKERLKEEWRLFEEQKRNFERERNYFTEAAIRLGREKKAFEED
RASWLKSQFLNMTPFANRSRCSSTDGYSALSIRSEPETRASSAKSQLSKSLNYTSFSTAK
PAPAQSTMVPSTAELNRAFYLIPDSSSSGCLNRVRRQEASSTLEDDKGVMAKNGVYNGDL
SIFSLETDQSSLT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggagagtggtggacaactgcgacaggagacgcgtctatggatcagcagtccacgtca
tactccagatttaatgccattttgggatttgtttcatcaggagcctatgagatctctagc
atttcacatgtgacgatgtccccgtcaaggcagaacaaccttgagtcactgcagctttcg
tttaagaactcctacaatctgctcacggtcttttgcacggatgacaacatcccgcagtgt
atctcctacatcaatcaggagctctcctccctgggtctctcctcattcatggagctaaga
tcagcaggagccgcaggcctcagcgcagtgcccgctttgaacgctgctttcgagctgctg
cagatccacaggcgcaccatggccactttggaggagcttgagaaagagcattacaagagg
tccagcaccttggatcacatgcagatgagcaattcaagacttagggatcagcttgaactg
tccattcgggagaaatcgggtttacatgaaaccgaaaggcagcttcaactcaaaatcaag
actctacaaagttgcctgaagacggagaaagatgaggtccaaaagcttcacagtatagtt
gccagccgcgcctcgcagtacaaccacgatgccaagaggaaagagagagagtcggcgaag
ctcaaggaacgtctcagtcagctacttgtggacagaagagatagaaaattggctattgac
gtgctgaattgcattggacgagcagacggcaaaaggagccactggaagaccgccaaagtc
acagccagtcacgaagggcagatgtttaagtccatgctgcgtgactacgaagccagccag
cggtcgctgatgctggagaatggagagctaaagaaggtcctacagcagatgaaaaaagaa
atggtacacatagtgagtccacgccaggcgccatgtagaggagcaggcactgatgacagc
aaagaggcgttggattctgatggggaggagaagacaggtgactccagtaaggaaatactg
gaccggtcatgtgacccagcgagggaggagctcaccaacagcattcgccaacaatggagg
aaagtgaggagccatatggagaaattggaccaccaagttaaaaatcaggtggagtccaat
aaggaggtgatcccgagggaaacccacgaggacgagatggagaggatgaggcgcgaagtg
cagcagtgcaaagagttcattcacacacagcagcaactcctccagcaacaactgaacggg
tcatttgacgacgagacggccgagctccttagtgactgctacactctggaagagaaggag
cggctcaaagaagaatggaggctatttgaggagcagaaaaggaattttgagagggagaga
aactatttcactgaggccgctatccgcctcggacgagagaaaaaggcttttgaggaggac
cgtgcctcatggctgaaaagtcagtttctaaacatgaccccctttgccaaccggagtaga
tgctcctcaactgatggttatagtgccttatcgatcagaagcgagccagagacgagggca
tcttcggcgaaaagccagctttccaaatctctaaactacacatcgttctctactgctaaa
cctgctcctgcacagagcaccatggtgccatccacggctgaacttaaccgggcattctac
ctcatcccagactctagttcctctgggtgtttaaatcgagtacgccggcaagaggccagc
agcacgttggaagatgacaaaggtgtcatggccaaaaacggagtctacaatggagacttg
agtatcttctctctcgagactgatcagagcagcctcacttaa
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