Syngnathus scovelli (Gulf pipefish): 125985003
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Entry
125985003 CDS
T08785
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125985003
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125985003
Membrane trafficking [BR:
sscv04131
]
Endosome - Lysosome transport
Others
Ferlins
125985003
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125985003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
Ferlin_C
FerB
FerA
FerI
CEP76-C2
Motif
Other DBs
NCBI-GeneID:
125985003
NCBI-ProteinID:
XP_049603386
LinkDB
All DBs
Position
Unknown
AA seq
2138 aa
AA seq
DB search
MLRVFILCAERLHTPDDDISDAYCTVTHEGSKKKTKVIKNNPNPVWNEGFEWDLKGVPLD
PGAELHCVVKDHEKMGRNRFLGESRLALRDVLSSPNFAASFTVSLLDTKRNNTGATLTLQ
ISYIPPPGSAPIFQSPSLPEPLPHTNPNVEMDTVTMISLDTLGEEDTESMIMLEVPEEQG
ADDGRSMVVVGPQGHQGQDSPAAQTPKRSPPSYNTHGGLKKRRRGASSRPKALANKPQDI
QVRMRIIQARQLPGVNINPVVKVSVAGQSRRTRIRKGNNPTFDETFFLNFFETPSDLFDE
PIFITVCDSRSLRTDAVIGEFKLDVGAIYSEHRHCYLRKWLLLCDPDDLSAGVRGYLKVS
LWVLAAGDEPPADKRECVEDKEDIEGNLLRPAGLSLRGAAFTLRVFRAEDLPQMDDAFMD
GVKQIFGFDSNRKNLVDPLVEIHFAGKTVCTKVLEKNANPQWHQSLTMPIRFPSMCEKMR
IRLLDWDRASHNDVIGTAHLCMSKISAPGGEIEDDLTPRGAPSCLDDTLGFLPTFGPCFV
NFYGSPREFSTFNDPHEALNLGKGEGVAYRGRVLVELTTKLVDKPEPKNEDIPSDDLLVV
EKFLRKRKFSLFVAFYSATHLQDVDDAIQFEVSIGNYGNKFDYSCLPLASTTQFSRAVFD
GCHYYYLPWGNVKPVVVLSSAWEDIAPRIEALNMLLAALDRLEANLQRVQLEIKAGSDMD
ELELRVVEMLDQVIIDCSQELPSLERWPCATPLDRSLRHIRSLHLQQIMAAALALKHGPA
TELSTVMEQAEDWASRLRDLAEEPQNSLPDIVIWMLQGERRVAYHRIPAHTVLYSERHGG
KHCGQLQTIFLKYPQGGDGEAKLPGQLRIKVWFGLAADDKHFNVYAEGKLSVFAETYENQ
TRLALVGSWGTTGLTCPKFSDVTGRVKLPKESFKPSPGWTWAGDWYISPERTLLFDADAG
HMTYTEEVFENQMRLPGGQWIGMNEGYTDVNGEKAVPKDDVECPPGWVWEEPEWSEDLNR
GVDDHGWEYGITIPPDRRPKSWVPAEKMYHTNRRRRWMRMRRRDQQKMDALRKQRPDEAM
WEGWEYTSLFGWRFHLKPRKTDSFRRRRWRCRMEPLEKTGPAAIFALECSLSSIEDKHDD
KSVTTTFGVNRPTISCFFDRGTRYHLRCYLYQARDLMAMDKDSFSDPYAIVSFLHQSQKT
VTVRNTLNPTWDQTLIFYDVEIFGDPEATVASPPHVVVELYDQDTYGADEFMGRCVCSPS
LSRSPSLAWFPIRRADKDAGELLAAFELIRREKPAVHHVPGLEADIGASSHVLDELMFPG
FLCDSAQIWPEESDLPCLPPQREPNVFVVPQGIKPVLQRTAIEVLAWGVRNLKSFQLASV
TSPSLQVECGGTTVQSCVIRSVKKKANFDVNTLFLDVRLPLEELYMPPIVIKVIDNRQFG
RKPVVGQCTIRSLEEYRCSPGEEDEEAGQTDQSEADESQGLMPRLVSGDVFITVDDEEPL
IPHQFADGASSAIINLSASSCSLHEEELMDWWSKFYASTGETNKCGTYLEQGSDTLQVYD
RELEKVEAFGGLSDFCQTFKLRRGKTQGEGEDPSVVGQFKGMFKIYALPDDPMAPPPPRK
FRKLPPNGVEECLVRVYVIQARGLQPKDANGKCDPYVKITLGKKTVNDHENYIPCTLEPV
FGKMFELSCSLPQEKDLHVTLYDHDRLTKDEKIGETVIDLENRFLSKYGAGCGLPQSYCL
SGVNRWRDQLTPRQLLSGLCERRNLRKPIYHRDTVLFRGVQYTKADLADGLKCQRHLGPI
EERLSLHILRQMGLVPEHVETRALYNPLQPDIEQGRLMIWVDLFPKSLGPPGPPFNITPR
KAKKFLLRCIIWNTSDVILDDVSISGEKMSDIYVKGWLDGHEHNKQKTDVHYRSLDGEAN
FNYRFVFPFLYLPAEQLCVVDKKEHFWNLDKSESKLAPRLTIQVWDNDKFSFDDYLGHLV
MDLNRMIRPAKSPEKCDLHLLEQPADPRVSLFEQKTVKGWWPCVREQDGQKLLAGKVEMS
LEIVTEQEEEERPAGLGRDEPNVNPHLEEPRRPETSFLWFSSPYKTMRFILWRRYKWFII
CFLIFFLIFLFVCVFLYSFPNYAAMRMVGPFGPARVAE
NT seq
6417 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgttttcattctgtgtgcagaacgcctgcatacgccggatgacgacatcagc
gacgcctactgcaccgtcacccatgaagggtctaagaagaagaccaaggtcatcaagaac
aaccccaatcccgtttggaacgagggctttgaatgggatcttaagggagttcctttggac
ccgggagctgagcttcactgcgtcgttaaggaccatgagaagatggggaggaacaggttt
ctgggtgaaagtcggctcgccctcagagacgtgctcagttctcccaacttcgccgcgtcc
ttcaccgtctctttgctggacaccaagaggaacaacacgggggctacactcaccttgcag
atttcctacatcccacccccaggatcagctcccatcttccagtccccatcgctacctgag
cccctgcctcacaccaaccccaatgtggaaatggacactgtcacaatgatctccctggac
acactgggcgaggaggacacggagagcatgatcatgctggaggtcccggaggagcagggt
gcggacgacgggcgctctatggttgtggtcggcccccaggggcatcagggacaggattcg
cccgccgcccagacccccaaacgctcaccgccgtcttacaacactcacggagggctgaag
aagaggcgtaggggtgccagtagtcgtcccaaagcactggctaacaagcctcaggacatt
caggttcgcatgagaatcatccaggctcgacagctgccgggcgtcaacatcaaccctgtc
gtcaaagtttcggtagcagggcagagtaggaggacgcgcatccgcaaaggcaacaacccc
acttttgatgagacttttttcttgaacttctttgaaacgccgtccgacttgtttgacgaa
cccatcttcatcacggtgtgcgactcgcgctcactcagaaccgacgccgtcatcggagaa
ttcaagctggacgtgggcgccatctacagcgagcatcgacactgctacttgaggaagtgg
ctgctcctttgtgaccccgacgacctgtctgctggggttcgaggttacctcaaagtcagc
ctgtgggtgttggccgccggagacgagccgccggcagataagcgcgagtgcgtggaggac
aaggaggacatcgaggggaaccttctgagacccgccggcttgtccctcagaggcgcagcc
ttcactttaagggtcttcagggccgaggaccttcctcagatggacgacgccttcatggat
ggagtgaagcagatttttggattcgacagcaacaggaagaacttggtggatcctctggtg
gagatccattttgccggcaaaacagtctgcacaaaggttctggagaagaatgccaatccg
cagtggcaccagagtctcacaatgccaattcggtttccgtccatgtgtgagaagatgagg
attcgacttcttgactgggaccgagccagtcataatgatgtcatcggcaccgcccacctc
tgtatgtccaagatttccgcacctggaggcgagattgaggacgacttgaccccgcggggc
gccccctcttgcctggacgacacgctgggattccttcccacctttggtccctgttttgtc
aatttttacggcagtcccagagagttcagcaccttcaatgacccccatgaagccctgaac
ctcggaaaaggggagggcgtggcctatcgaggtcgagtcttggtggagctgaccacaaag
ctggtggacaaaccggagcccaaaaatgaagacatcccgtcagatgatctgctcgtggtt
gagaagttcctcaggaaaaggaagttctccctctttgtggcgttctactctgccacgcat
ctccaggacgttgacgacgcaatccagtttgaggtcagcatcggcaactacggcaacaag
tttgactacagctgcctgccgctggcctccaccacgcagttcagcagagccgtgtttgac
ggttgtcactactattacctcccgtgggggaacgtgaagccggtggttgttctgtcgtcg
gcgtgggaagatatcgctccgaggatcgaggctctcaacatgcttttggccgcgctggac
cgattggaggccaacttgcagcgggtgcagctggaaataaaggcgggaagcgatatggac
gagctggagctccgagtggtggagatgttggatcaggtgatcatagactgcagtcaggag
ctgccttctcttgaacgctggccgtgcgcgaccccgctggaccgctcgctccgacacatc
cgctctctgcacctgcagcagatcatggcggcggcgctggcactcaaacacggacctgcc
acggaactttccaccgtcatggagcaggcagaggactgggccagccggctcagggacttg
gctgaagagccccagaacagccttcccgacatcgtgatctggatgctgcagggtgaacgg
agggtggcgtaccatcgcattccagcacacaccgtcctctactctgagcgtcacggtggc
aaacactgcggacagctgcagaccatcttcctcaaatatccacaaggtggcgatggagag
gccaaacttcccggtcagctcaggatcaaagtttggttcggactggctgccgacgacaaa
cacttcaacgtctacgctgaaggaaagctgtccgtctttgcagaaacgtatgaaaatcag
actcggctcgccctagtgggcagctgggggacgacgggtcttacttgccccaagttcagt
gacgtgacaggaagggtaaaactgcccaaggagagtttcaaaccctcgcctggctggacc
tgggctggggactggtacataagtcccgagaggacactgctgtttgatgcggatgccggt
cacatgacctacacggaggaagtctttgaaaaccagatgaggttacctggcggccagtgg
attggcatgaatgaaggctacaccgacgtgaatggcgagaaggccgtgcctaaagacgat
gtggagtgtcctccgggttgggtgtgggaggagccagagtggagcgaggacctcaacaga
ggcgtggacgatcacggttgggagtacggcatcaccatcccaccagatcgccggcccaag
tcgtgggtccccgccgagaagatgtaccacaccaaccggcgacgccggtggatgcgcatg
agaaggcgggaccagcagaagatggatgcgctcagaaagcagcgcccggacgaggcgatg
tgggagggctgggagtacacctcgctattcggctggaggttccacctaaagccgaggaag
acggacagcttccgcaggcgcaggtggagatgccgcatggagcccctggaaaagacgggc
ccggcggccatctttgctctggagtgttccctgagcagcatcgaagacaaacacgacgac
aagtccgtcaccaccacctttggagtcaacagacccaccatttcctgcttctttgaccgg
ggcacccgctaccacttgcgctgctacttgtatcaagccagggacctgatggccatggac
aaggacagcttttctgacccctacgccatcgtgtctttcctccatcagtcccagaagacg
gtaactgtgcgaaacaccctcaatcccacctgggatcagacgctcatcttctacgacgtg
gagattttcggggaccccgaagccaccgtggccagccccccgcatgtggtggtggaactt
tacgaccaggacacatacggagcagacgagttcatgggtcgctgcgtttgctcgccctcg
ctgagccgctcgcccagcctggcctggttccccatccgccgcgccgacaaagacgccggt
gaactgctggcagcttttgagctcatacgccgggagaagccagcagttcatcacgtcccg
gggctcgaggctgacattggggcttctagccatgttctagatgagttgatgttcccggga
ttcctctgtgacagcgcgcagatatggccggaagaatcggaccttccatgcctaccccct
cagagggagcccaatgtcttcgtggtgcctcaggggatcaaacctgttctgcagagaacc
gccatcgaggtgttagcatggggtgtccgtaacctgaagagcttccagttggccagcgtt
acctctcccagcctgcaggtggagtgcggcggcaccaccgtccaaagctgcgtcatccgc
agcgtgaagaagaaggccaactttgacgtcaacaccctctttctcgacgtgaggctcccc
ctagaggagctctacatgccccccatcgtcatcaaggtcatcgacaaccgtcagtttggc
aggaagcccgtggtgggacagtgcaccatccgctccttggaggagtaccgctgctctccc
ggggaggaggacgaggaggcggggcagacggaccagtcggaggcggacgaaagccaaggt
ctgatgccccgcttggtcagcggcgacgtcttcatcaccgtggatgacgaggagccgctc
atccctcatcagtttgcagacggagccagttccgctattattaacctctccgcttctagc
tgcagcctccacgaagaagagttgatggactggtggagcaagttttatgcctccacagga
gagacaaacaagtgcggaacgtatctggagcaaggctcggacaccttgcaggtttacgac
agagagttggagaaggtcgaggccttcgggggtctgtcggatttctgtcaaaccttcaag
ctacgccgagggaagacgcagggggaaggtgaggatccttcggtggtgggccaattcaag
ggtatgtttaagatctacgccttgccggatgaccctatggcaccaccgcctccacgaaag
ttcaggaagcttcctcccaacggcgtggaggagtgtttggtccgagtatacgtcatccag
gctcgaggacttcaaccgaaagatgccaacggcaagtgtgacccctacgtgaagatcaca
ctcggaaagaagaccgtcaatgatcatgaaaattacatcccttgcactttggagcctgtt
tttggaaagatgttcgagctgagctgctcgctcccccaggagaaggacctccacgtgacg
ctgtacgaccacgacaggctgaccaaagacgagaagatcggcgagacggtcatcgacttg
gagaaccgcttcctgtctaaatacggagccggctgcggtctgccgcagtcgtactgcctc
tcgggtgtgaaccgatggcgggaccagctcacccccagacagctgctatccggactgtgc
gagcggcggaacctacggaagcccatctaccacagggacacggttcttttcagaggggtg
cagtacaccaaagctgatctcgcggacggactcaagtgccaacggcatctgggccccatc
gaggagcgtctctcgctgcacattctgaggcaaatgggtctggtgccggaacacgtcgag
acccgggcgctgtacaaccccctgcaacccgacatcgagcagggacgtttgatgatatgg
gtggacctgttccccaagtctctgggacctcctggacctcctttcaacatcacaccacgc
aaggccaagaagttcttgctacgctgcatcatctggaacaccagcgatgtcatcctcgac
gacgtcagcatcagcggggagaagatgagcgacatctacgtgaagggctggctggacggc
cacgagcacaacaaacaaaagacggacgtccactaccgctcgctggacggggaagccaac
ttcaactaccgattcgtctttcctttcctctacttacccgccgagcagctgtgcgtggtg
gacaaaaaggaacatttctggaatctggacaaaagtgaaagtaaacttgctcccagattg
accattcaagtgtgggacaatgacaagttctccttcgacgactaccttggtcacttagtg
atggacctgaaccgcatgatacgtcccgccaagtcgccggagaagtgcgacctgcatctg
ctggagcagccggccgatccgcgggtgtctctctttgagcagaaaaccgtcaagggttgg
tggccctgcgtccgtgaacaggatggacaaaaactccttgctggcaaggtggagatgtct
ctggagatcgtgacagagcaagaagaagaagagagaccggccgggctcggccgagacgag
cccaacgtcaacccccacctggaggaacctcggcgtcccgagacctccttcctgtggttc
tcgtccccctacaagacgatgcgcttcatcctgtggagacgatacaagtggttcattatc
tgcttcctcatcttcttcctcatcttcctcttcgtttgcgtcttcctctactccttcccg
aactacgccgccatgcggatggtgggcccgtttggaccggcccgggtagccgagtga
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integrated database retrieval system
