Syngnathus scovelli (Gulf pipefish): 125985071
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Entry
125985071 CDS
T08785
Symbol
toe1
Name
(RefSeq) target of EGR1 protein 1
KO
K13202
target of EGR1 protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125985071 (toe1)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125985071 (toe1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
zf_CCCH_4
zf-CCCH_2
ORC5_C
Motif
Other DBs
NCBI-GeneID:
125985071
NCBI-ProteinID:
XP_049603512
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Position
17:10070952..10073654
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AA seq
486 aa
AA seq
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MTSSFVVPVIDVQNSNFKELWPAMVVAIKTSSFVAVDTELSGLGNRTSLLAESIEDRYKA
ICHAARSRSILSLGIACYKMLSNEAADTYLVQVYNLTLLCSEEYIIEPQSVQFLVQHGFD
FNKQYAGGIPYHKGNDKGGSDNQGVHIRALFTELLRARKPLVLHNGLIDIAFLYQNFYAH
LPDRLATFTADLSEMFPAGIFDTKYVTEFDLRFSASYLEYAYKKCKLDNSRNEASVETGR
HVYLEFCQYAGAMSRYVDHRICPAGAPNSVNTEICQSFSAFGWCSKGTKCPLSHDTDLII
FQDDKSKDDKRKKRKRQKKKKKEEVEDDSSNLDGAPQNKMPHLELNPEEGHQDVTAGFLE
ITNLMDSNTHEGENVKTNSEGNELGEHNTESTNTEMTGKSENKAESGTHRAGFDAFMTGY
IFAYSCTLVKKEEVNASGEEQIWPPTSFNKVYLSGKSTPLNIVKSTFSKSSKAHMQKMDM
VWGKKK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctcgtttgttgttcctgttattgatgttcagaatagcaactttaaagaactt
tggcctgctatggtagtggctattaaaacatcttccttcgttgctgttgatacggagctg
agtggccttggaaatagaacatcattgcttgcagaatctatagaagacaggtataaagcg
atttgtcatgcagcccgctcccgctccatcctctccttgggaattgcctgctacaagatg
ctcagcaatgaggctgcagacacatacctggtccaggtatataacctcaccttactgtgt
tcagaggagtacatcatcgagccccaatcagtccagttcctcgtacaacacgggtttgac
ttcaacaagcagtatgcaggggggatcccctatcacaagggtaatgataagggaggatca
gacaaccagggtgttcatatccgggctttatttactgagctgttacgcgcaagaaaacct
ctggtgctccacaacggcctcattgatattgcttttctctatcagaatttctatgcgcat
ctaccagatcgtttagccacctttacagccgacctctccgagatgtttcctgcaggcatc
tttgacactaaatatgtcacggaattcgatcttcgcttcagtgcctcatacctggagtac
gcctataagaaatgtaagttggataacagtcgaaatgaggcctctgttgaaactggtcgt
catgtctacctggagttctgtcagtatgccggcgccatgtcccgctatgtggaccacagg
atctgtccagctggagctccgaactcagtgaacactgagatttgccagtccttctcggca
tttggttggtgttcaaaaggcaccaagtgtcctttgtcccacgacactgaccttatcatt
ttccaagatgataaatcaaaggatgacaaaaggaaaaagaggaaacgtcaaaagaagaaa
aagaaagaagaggtagaggatgactcctccaatttggacggtgctccccaaaacaaaatg
ccccatttggaattgaatccagaggagggtcatcaagatgtgacagcagggtttctggaa
attacaaatttgatggacagtaatacccatgaaggtgaaaatgtgaaaacaaatagcgag
gggaatgaattaggtgagcacaacacagagtccacaaacactgaaatgaccggaaaaagt
gaaaacaaggcagagtcggggacccaccgagccggcttcgatgccttcatgacaggatac
atatttgcctactcgtgcacactggtgaaaaaggaagaagtgaatgcaagcggagaggaa
cagatatggcctccaacctccttcaataaggtctacctcagtggcaagtcaacgccgctc
aacatagtcaagagcaccttctccaagtcatccaaggcccacatgcagaagatggacatg
gtttggggaaaaaagaaatag
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