Syngnathus scovelli (Gulf pipefish): 125985109
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Entry
125985109 CDS
T08785
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125985109
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125985109
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125985109
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125985109
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125985109
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
Type II RPTP family
125985109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Tc-R-P
fn3_2
PTP-SAK
V-set
DSPc
Y_phosphatase3
Fn3_PTPRU
PTPlike_phytase
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
125985109
NCBI-ProteinID:
XP_049603577
LinkDB
All DBs
Position
17:complement(8101472..8161224)
Genome browser
AA seq
1956 aa
AA seq
DB search
MHLCNTGRALVQSRRLRTSPLCLLLHLIILLIKLNSLSAMPAGPKFTKIPTDQIGVSGGV
ASFVCQATGNPKPVVYWNKKGKKVNSQRIEVTIEFDEGAGAVLRIQPLRAPRDENIYECV
ARNSEGELSVTAKLAIIREDLLPFGFPSIDMGPQLKVVERTRTATMLCAASGTPDPEVSW
FKDFLPVEPSTSRGRIKQLKSGALQIENSEENDQGKYECVATNSQGVRYSSPANLYVREA
SETLRRVPPRFSIPPSNHEIMPGGSVNITCVAVGSPMPYVKWMVGGEDLTPEDEMPLGRN
VLELTGVRESANYTCVAMSSLGIIEATAQVLVKTLPKPPGTPMVTETTATSVTITWDSGN
PDPVSYYIIQYRAKGPDSKYETVDSITTTRYSIGGLYPNTEYEIRVSAFNSIGQGPPSVR
VEARTGEQAPASPPRNVQAHIISQNTVMVRWEDPEEPNGQVKGYRVYYTMDPSRPINEWK
IHNVQDSLITTIQSLVTSETYTLQVLAFTSVGDGPFSDPVHVKVMPGVPGQPGKFKIGRV
TDTSIELTWEPAYTKMAIINYELLYKPVKYGSLEKLTFGPRNSYTVEGLKANTDYSFSLA
AISNKGIGAFTNELVQRTSQAKPSAAPEGVSCKSASSTSLRVSWRPPPLEGHNGELAGYE
LRYRKVSGAGGKGQGQEVSGLPIPARQADTLVEGLEKWSWYNITMAAATSEGTGPNSLPV
LCRTDEDVPSAAPRHIDVTPFNSSALRVTWRSVLPRLRQGRIRGYQVHYSRVGGSESRNL
PWIKDLLLDESQMEEDDSTQYEMILGGLKAETLYAVSVAAYTAKGDGAHSKAKMVKTSGM
VPLPPCLWAHLGLGPSVVLRWAPPLVCAASGSDGQRLPLEIQGYRLQFGPKNTSQETSID
FTKERNFTVINLSPGSTYVFALSAKSRAGYGDVIQREITVPVIPPSGYPKISDFVNATCC
SLQLSWLPPDRDESNGVITEYNIAYKETSGSKASSLAGNFLLPNLRAPPRVVTLPASQSS
YTILGLNHSTAYEVQLRAHNQAGPGPFSPPRVCQTRAFETDVPRNFSVNLATRTSVLLTW
EFPESSNPYRFSVEYNRQKMEVDARLKKAVIPNLQPDTSYDFKITAPEGNMGGLRHRITA
KTSPPITIRRPEIDHTRDTETTVTIILPSLESRTPVKNVYVVVVPLRRARGVIRHLKSPD
EMDLEELLKDISQKQRDSRQQKQVDLRRAYITARFTPATLPAFFTLGDQLDYGGFENRAL
EPGQEYVFFILAELNSTTGKMYVASPYTDPVIAPDSDPQPLDAGDGLIWVVGPVLAVVFI
ICIVIAILLYKNKPDSKRKESEPGTKSLLSNAEMMAHHPTDPVEMRRINFQTPGMMSHPP
IPINELAEHIELMKANDNLRLSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHTR
VILAPIEGVLGSDYINANHIDGYRKQNAYIATQGPLAETFGDFWRMVWEQRAASVVMMTR
LEEKSRIKCDQYWPSRGTDTYGTIQVTLLDTMELATFCVRTFSLHKSGSSERREVRQFQF
TSWPDHGVPEYPTPFLNFLRRVKACNPPDAGPIIAHCSAGVGRTGCFIVIDAMLERIRHE
RTADIYGHVTLMRSQRNYMVQTEDQYSFIHEALLEAVACGNTEVAARSLYSYMQKLAKVE
SGEHVTGMELEFKRLANTKAHTSRFVTANLPCNKFKNRLVNIMPYETTRVCLQPIRGLEG
SDYINASYIDGYRQQKGYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQ
YWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKS
GEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGAVDIFQTV
KMLRTQRPAMVQTEDEYQFCYQAALEYLGSFDHYAT
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgtgcaatacaggccgtgcactggtccagtccagaaggctcaggacctccccc
ctgtgtctccttctgcatcttatcatcctgctaattaaactcaacagtctttctgcaatg
ccagctgggcccaagtttaccaagattcccacagaccagattggtgtatcagggggcgtg
gcgtcgtttgtgtgccaggccaccgggaatcccaagccggttgtctactggaacaagaag
ggcaagaaggtcaactctcagcgtatcgaggtgaccatcgaatttgacgaaggcgctggc
gccgtgctgaggatccaacctctccgagcacctcgagacgagaacatctacgagtgtgtc
gcacggaacagcgaaggagagctgtcagtcacggcaaagctggccattatcagagaggac
ctgttgccgtttggcttccccagtatcgatatgggcccgcagctgaaggtggtggagcgc
acaaggacggccaccatgctgtgtgccgccagtggaacgccggaccccgaggtctcctgg
ttcaaagactttctgcccgttgaacccagcaccagccgaggccgcatcaaacagctcaaa
tcaggagctctccagatcgagaacagcgaggaaaacgaccaagggaagtacgagtgcgtg
gccactaattctcaaggtgtgcgctactcctcgccagccaacctctacgtgcgagaagcg
tcagaaacattgcgccgcgtcccccctcgtttctccatccccccctccaaccacgaaatc
atgccgggagggagcgtcaacatcacctgcgtggcggtaggctccccgatgccctacgtc
aaatggatggtgggtggcgaggacctgacccccgaggacgagatgccgctcggtcgcaac
gtgctggagctcaccggcgtccgggagtcggccaactatacgtgcgtggccatgagtagt
ctgggtatcatcgaggccacggctcaggtcttagtcaaaactctgccaaaacctcctggc
actcccatggtcacagagaccacagccaccagcgtgaccatcacatgggactcgggtaac
cccgacccggtgtcctattacatcatccagtaccgagccaaaggtccggacagcaagtac
gagacggtagacagcatcaccaccacccgctacagcatcggtgggctgtaccccaacacc
gagtacgagatccgagtatcggcctttaacagcatcggccagggtcccccttctgtgcga
gtcgaggcccggacgggcgagcaagccccggccagcccgccgcgaaatgtccaagcccac
attatttcacagaacaccgtgatggttcgctgggaggacccggaggagccaaatgggcag
gtgaagggctaccgcgtgtactacaccatggacccgtcccggcccataaatgagtggaag
atccataacgtccaggacagtctgatcacgaccatacagagcttggtgacctccgagacg
tacaccctccaagtcctggcgttcacctccgtcggggacgggcccttctctgacccggtc
catgttaaagtcatgccaggagttccaggtcaaccggggaagtttaaaatcggaagagtg
actgacaccagcattgagctgacctgggagcccgcatacaccaagatggccatcatcaat
tacgagctcctttacaaacctgtcaaatatggcagtttggagaagctgacctttggcccc
cgaaactcctacacggtggagggcctgaaagccaacacagactactccttctccctggca
gccatctcaaacaaaggcatcggcgctttcaccaatgaactggtgcagaggacatcacaa
gccaaaccctcagccgcacccgagggtgtatcctgcaagagtgccagctccacctcgctg
agagttagttggcggccgcctccactggagggccacaatggcgagttggcaggttatgag
ctaaggtaccgcaaagtttctggggcaggaggcaaaggtcagggccaggaggtgtccggg
ctgcctataccggcccggcaggcggacacgctagttgagggcctggagaaatggagctgg
tacaacatcaccatggcagctgccacttctgagggaactgggcccaacagcttgcctgtg
ctctgcagaacagatgaggatgttcccagcgcggcccctcgtcacattgatgtcactcct
ttcaattcctccgcactccgggtcacttggcggtctgtgttgccaaggttacgccaaggt
cggatccgtggttaccaggtgcactacagtcgcgttggtggcagcgaatcccgaaatctt
ccttggataaaagatctcttattggatgagtctcagatggaggaggatgattccactcag
tatgagatgattttgggaggcctgaaagcagagacgttgtacgctgtgtcagtggcagcg
tacaccgccaaaggtgatggagcacatagcaaagccaagatggtgaagacctcagggatg
gtacctctccctccttgcctgtgggcacatttgggattgggtccatcagtggtgcttcga
tgggctcctccgctggtatgcgcagcgtcaggctctgatggccagaggctccctctggaa
attcaaggctaccgcctccagtttggccccaagaatacatcccaggagacctcgatagat
ttcacaaaagaaagaaatttcaccgtcataaacctctccccgggctccacctacgtcttt
gcgctctctgcaaagagccgagcgggttacggagatgttatacagagggaaataaccgtt
cccgtcatcccaccctcaggatacccgaaaatctctgactttgttaacgccacttgctgc
tccctgcagctctcctggctccctcctgaccgagacgagagcaatggcgtcatcacagag
tacaacatcgcttacaaagagacttcaggctccaaagcctcaagcctcgcgggcaacttt
ttattaccgaacctccgtgcccccccacgtgtggtcacgctaccagcgagccagtctagc
tacaccatcctgggcctcaatcacagcacagcctacgaggtgcagctcagagcccacaac
caagcagggcccggccccttcagcccccctcgggtgtgccaaacccgggcctttgaaaca
gacgtaccgaggaatttctcagtcaatctggccacgaggactagtgttcttctgacgtgg
gagttcccagagagcagcaacccttatcgctttagtgtggagtataatcggcaaaagatg
gaggtggacgctcgcctgaagaaggcggtcatcccaaaccttcagcccgacaccagctac
gactttaagatcacggcacccgaaggcaacatgggcggccttcgccaccgtatcaccgcc
aaaacatccccgccaatcaccatccgccgcccggagatcgatcacacccgggacacggag
acgacggtcaccataattctgccatcgctggagtctcgaactcctgtcaagaatgtttat
gttgttgtggttccactgaggagagcccgaggcgtcatcagacacttgaaaagcccggat
gaaatggatctggaggagctgttaaaagacatcagtcaaaaacagagggactctcgccag
cagaagcaggtggacctgcgccgcgcttacatcacagcccgcttcacacctgccacccta
ccagccttcttcaccctcggggaccagctggactacggaggctttgagaaccgcgcatta
gagcccgggcaggaatacgtcttcttcatcctggctgaactcaactctacaaccgggaag
atgtacgtggccagcccttacacagatcccgtcatcgccccggattccgacccccagccc
ctggatgcaggtgacggtctcatctgggtggtgggaccggtactggcagtggttttcatc
atctgcatcgtcatcgctattttactctacaagaacaaacctgacagcaagcgcaaggag
tctgagccaggaaccaaaagtcttctgagtaatgccgagatgatggcccatcacccgaca
gaccccgtggagatgagacgaattaacttccagactccaggaatgatgagccatcctccc
attcctatcaacgagctggctgagcatattgagctgatgaaagctaacgacaatctccga
ctttcccaggaatacgagtccattgaccccgggcagcaattcacttgggagcattccaac
ctagaggtcaacaagcccaaaaaccgctacgctaacgtgatagcgtacgaccacaccaga
gtcatcttggcacccattgaaggtgtcctgggaagtgactacatcaacgccaatcacatt
gacggctacagaaagcagaatgcctacatcgccacccaggggccactagctgagacattt
ggtgacttttggagaatggtgtgggagcagcgggcggcttctgttgtcatgatgacacga
ttggaggagaaatcacggataaagtgcgaccagtactggcctagtcgggggacagacaca
tatggaacgatccaggtaaccctgctggacaccatggaactggccacattctgcgtgcgc
accttctccctgcataagagcggcagcagtgaacgacgagaggtgcgccagttccagttt
acctcctggccggatcacggcgttccagagtacccaaccccgttcctgaacttcctgcgt
cgggtcaaggcctgcaatcctccggatgccggccccatcatcgcccactgcagcgccggc
gtcggccgcaccggctgcttcatcgtcatcgacgccatgctggagcgcatccgacacgag
cggaccgccgacatctacggtcacgtcaccctgatgcgctcgcagaggaactacatggtg
caaactgaggatcagtacagcttcattcacgaggcgctgctggaggccgtggcctgcggg
aacacagaggtggcggccaggagtctttactcgtacatgcagaagctggccaaggtggag
agcggcgagcatgtcaccggcatggagctggagtttaagcgactggccaataccaaagcg
cacacgtcccgctttgtcaccgccaacctcccctgcaacaaattcaagaatcggctcgtc
aacatcatgccctacgaaaccacccgagtgtgtctccagccaatcagaggcttggaaggg
tctgactacataaacgccagctacatcgacggttacaggcagcagaaaggctacatcgcc
acccagggtccactggcagagactacagaagacttctggaggatgctgtgggagcacaac
tcaaccatcgtggtcatgctcactaaactgagagagatgggccgggagaagtgtcaccag
tactggcctgccgaacgttccgccaggtaccagtactttgtggtggaccccatggccgag
tacaacatgccccagtacatcctgcgggaattcaaagtaacagacgcccgggacggccaa
tcacgaacagtccgtcagttccagttcactgactggcccgagcaaggtgtgcccaaatcc
ggtgaaggcttcattgatttcattggccaagtgcacaaaactaaagagcaatttggccag
gatggaccgatcagtgttcattgcagtgctggcgtgggtcggacgggggtcttcatcact
ctgagcattgtgctggagaggatgcgctatgaaggggcggtagacattttccagactgtc
aaaatgctgcggacacagagaccagccatggtgcagaccgaggatgagtaccaattctgt
taccaggctgctctggagtacttgggtagctttgaccactatgcaacataa
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integrated database retrieval system
