Syngnathus scovelli (Gulf pipefish): 125985133
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Entry
125985133 CDS
T08785
Symbol
sema6ba
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba
KO
K06842
semaphorin 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
125985133
NCBI-ProteinID:
XP_049603677
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Position
17:complement(8063803..8088117)
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AA seq
899 aa
AA seq
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MYSAAMATVGPLLTFFLLLLHLADGSFPEEPSPLSYVPLEVVRRYPVFLGRAHRSAQRQE
LHIQTVLQVNRTLYIGARDDLYRVELDNMAGDEMFYSKKRTWESNKNDIRVCRMKGKHEG
ECRNFVKVLLRQHGGLFVCGTNAFNPLCANYTRDTLEMVGEPVSGMARCPYDPRHANVAL
FADGSLFTGTVTDFLAIDAVIYRSLGDSPALRTVKHDSKWFREPYFVSAMEWGSHIYFFF
REMAMEFHHLEKVMVSRVARVCKSDLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLL
HATSGIIRMQGRDVILGLFSTPPNSIPGSAVCVFDMQQLAHAFEGRFKEQKSPESIWTPV
PEEAVPKPRPGGCAVQGSRFSSSTTLPDEVLNFVKTHPLMDETVPLLGHRPWVVKTMGRY
QLTAMVVDTEAGPYRNRTVLFLGSTRGTILKFLMIPNGDSMSHSSVFLEEVEGFNPERCG
EDSPQARQLLSLTLDRTSHTLLLAFPSCLVRLPTSRCHLYSRCMKSCLASRDPYCGWTRG
STCSFLRPGTRLPFQQDVEYGNTTSHLGDCDGILQQSLLIEPESLVSLNLLVASAVSAFT
IGAALSGLAVCWIMAHKPTNRRHGNTTQSSIQRRERGLLSNAGGMGGSVLSVTRQGGGER
TCTQGGETLFVMPNGWVKSGELDPGFLPTPEHTPQQKRRGLRLSDSNSGGWDTSQTYLGG
GSVGLGSPCRIPPSVYLTTRLFQQGGVSRHGGEGRGCDTPRQHYVCLSRQEKGGKGTPKA
PLRKSAGEYVYPMTPQDSPERRRVVSAPSAPAECAEPLPLRWPAPEGYILSSHAMVPVPL
PPPSLPAPSGQTYMSQQHTPALTRAILRGALERGELGELMDLSHLMSKKNCNDRTQAGQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtattctgctgccatggcaaccgtgggtcctcttctcacattttttctcctgctgctt
catttggctgatggctcattcccagaggaacccagtccactcagctacgtccctctggag
gtggtgagaaggtatccagtgtttttgggcagagctcaccgttcggcacagagacaagag
ctgcacattcagacggttctccaagttaaccgaacactctacatcggagccagagatgat
ttatatcgagtggaactggacaacatggcaggtgatgagatgttctacagcaagaaacga
acatgggaatccaacaaaaatgacattcgagtgtgccgaatgaaagggaaacatgaggga
gaatgtcgtaatttcgtcaaggttctgctccggcagcacggaggcctgtttgtgtgcgga
acaaacgccttcaacccgctgtgtgcaaactacactagagatactctagaaatggtgggc
gagcctgtgagcgggatggcgcgctgcccgtatgatccacggcatgccaacgtggcttta
tttgcagatggaagtcttttcactggcaccgtgacagacttcctggccattgacgccgtg
atctatcgcagtcttggcgatagccccgccctccgtacggtcaaacatgactccaaatgg
ttccgagagccctactttgtgagcgccatggagtggggatctcacatttatttcttcttc
agagaaatggccatggagtttcaccatctagaaaaggtaatggtgtcccgtgtggctcgt
gtgtgcaaatccgacctgggcggctctcagcgtgttctcgagaaacagtggacaacattc
cttaaggctcggctcaattgttccgtcccgggagactcgcatttctatttcaaccttctc
cacgccacaagcggaatcattcgcatgcaagggcgtgacgtcattttgggccttttctcc
acacccccaaacagcatccccggttctgcagtgtgtgtgtttgacatgcagcagctcgca
cacgcctttgagggacgcttcaaggaacagaagtccccagagtctatctggactccggtg
ccagaagaggccgtcccgaaacccagacctggaggatgtgcagtccaaggatcccgattt
agttcctccaccacgctaccagatgaggttttaaactttgtgaaaacccacccgttgatg
gatgagacagttccattgctggggcacagaccctgggtcgtcaagactatgggccggtac
cagctgacagctatggtggtggacactgaagccgggccctacaggaatcgcacggttttg
tttctgggctcgacccgagggaccattctcaagtttctaatgattcccaatggggattca
atgtctcacagcagtgtgttcttggaggaagtagagggtttcaaccccgagagatgtggt
gaggattcacctcaggctcgccagctcttgtctttgacattggaccgcaccagtcatacc
ctgctactggccttcccgtcctgcctggtccgtttgcccacatcccgttgccacctgtac
tcccgttgcatgaagagttgccttgcctccagggacccatactgtggctggaccagaggc
agcacctgctctttccttagaccaggaaccaggcttccttttcaacaagatgtggaatat
ggaaacaccacatcccatttaggagactgtgatggtatcctgcagcagagtctcctcatc
gaacccgagagtctggtctccctcaacctgctggtggcttctgcagtgtcggcgttcacc
atcggggcggcgctctccggcctagccgtctgctggatcatggcccacaaacctaccaac
cgtcgccatggcaacaccactcagtcgtccatccagcggcgtgaaagaggcctattaagt
aacgccggcggaatgggaggctctgtgctcagcgtgacgcggcagggaggcggagagcgc
acctgcactcaaggcggggagaccctctttgtcatgcccaacggctgggtcaaatccgga
gagctagaccccggtttcctccccaccccggagcacacgccccagcagaaacgaagaggc
ctgcgcctgtctgactccaactccggcgggtgggacaccagccagacctacttgggagga
ggctcagtgggtctgggctccccctgtcgaatacccccctcggtttatctgaccaccaga
ctgttccagcaggggggagtcagccgacacggaggcgagggccgggggtgcgacaccccc
cgacagcactacgtctgcttgagcaggcaggagaaaggaggcaaggggacgcccaaagcc
cccttgaggaagtccgcgggggaatacgtgtaccccatgacgccccaggactcgcctgag
cgtcggagggtggtctcggcgcccagcgcgccggccgagtgcgccgagcctctgcctttg
cgctggccagccccggagggctacatcctcagtagccacgccatggtgcccgtccccttg
ccccctccctcactgcctgcccccagcggtcagacatacatgtcccaacagcacaccccg
gctctcaccagagccatcctgaggggggctttggagcgaggggagctaggggagctgatg
gacctcagccatctgatgagtaagaagaactgcaatgacaggactcaggctggacagtga
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