Syngnathus scovelli (Gulf pipefish): 125985153
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Entry
125985153 CDS
T08785
Symbol
fem1a
Name
(RefSeq) protein fem-1 homolog A
KO
K25805
protein fem-1 homolog A/C
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125985153 (fem1a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
125985153 (fem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
125985153
NCBI-ProteinID:
XP_049603717
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All DBs
Position
17:complement(8158470..8161125)
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AA seq
617 aa
AA seq
DB search
MDISTAVFNAARDGKLKLIQKLLSNKTPEELEALAEEKTQGGTPLLIASRYGHLDVVDYL
LEHCKANVELGGSVNFDGETIEGAPPLWAASAAGHLAVVKTLLKHGASVNNATLTNSTPL
RAACFDGHLEIVRYLVEHRADMEVANRHGHTCLMISCYKGHKEIAKFLLDRGADVNRKSV
KGNTALHDCAESGSLDIMKLLLKCSARMERDGYGMTPLLAASVTGHTNIVEYLTHQPRTS
REECIDALELLGASFVDKKRDLLGAMRYWRRAMELRQPGEKAGCLTKPPPGAPVPAYGCA
QEVNNAEELEALITDPDEMRMQALLVRERILGPSHPDTSYYIRYRGAVYADSGNFERCIS
LWKYALEMQQSNLDPLSPMTASSFLSFAELFSFALQDRAKGTLSTRITFHDLMTVLGKSV
REVERAVAQKDNPPEAPQFTKVLAIILHLIFLLEKLECNPEQEHQKKHTVYHLLKLNPRG
RCGFTPLHMAVDKETTSVGRYPVGRFPSQAVASLLLECGADVDARDCENNTPLHIAACNG
CPEIMVLLMKAGAHFDATNARRKAAYELLDEHNMGDPALYPLNYITLQCLAARAVEKHRL
PYRGLITEEMEAFIELH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatatatctactgctgtgttcaacgcggccagagatggtaagctgaaacttatccag
aagttgctgagcaacaaaactcccgaagagctcgaagctctagctgaagagaaaacacaa
ggaggcactcctctcttgatagcgtcgcgatatggacacttagatgtcgtagactacctc
cttgagcattgtaaagctaatgtcgaactcgggggctcggtgaactttgacggcgagacc
atcgaaggagctccgccgttgtgggcggcttcggctgccggtcacctcgcggtggtcaag
actcttttaaaacacggtgcctcggtgaacaacgcgactctgactaactccacaccgctt
cgagctgcctgctttgacggccacttggagattgtccgctacctggtggagcacagggct
gacatggaggtggccaacagacacggccatacctgtctgatgatttcctgctacaagggc
cacaaggagatagccaagttcctcctggaccgtggtgctgatgtcaaccgtaaaagtgtc
aaaggcaacacggccctccacgattgcgccgagtcaggcagcctggacatcatgaagttg
ttgttaaagtgtagcgctcgcatggaacgggacggttacgggatgaccccgctcctagcg
gccagtgttacgggacacaccaacattgtggagtacctcacccaccaaccccgcacttcc
agggaggaatgcatagatgcgctcgagctgctcggagccagttttgtggataaaaagcgc
gatcttttgggagcgatgcggtactggagacgagccatggagctcaggcagccaggggaa
aaagcagggtgcttaaccaagcccccacccggggcccccgttccggcctacggctgtgcg
caggaggtgaacaatgcagaggagctggaggcactgatcacagaccccgacgagatgagg
atgcaggccttgttggttcgcgagcgcatcttgggtccatcccacccggacacctcctat
tacatccgctacaggggagctgtctacgcagactctggcaattttgaaagatgtatcagt
ctgtggaaatacgccttggagatgcagcagagtaacctggacccactcagccccatgacg
gcctccagcttcttgtcctttgccgagctcttctcctttgcccttcaagaccgcgccaaa
ggcaccctgtcaactcgcatcaccttccacgatctgatgaccgtgttaggtaaaagcgtg
cgggaggtggagcgggccgtggcgcagaaggacaatccgcccgaggcgcctcagttcacc
aaggtgctggccattatcctccatctcatctttctgctggagaagctggagtgcaacccc
gagcaggagcaccagaagaagcacacggtctaccacctgctgaagctgaatccccgcggc
cgttgtggcttcacgccgctccacatggccgtggataaggaaaccacgtcggtgggccgc
taccccgtgggccgctttccctcccaggcggtggcgtcgctgctgctggagtgcggcgcc
gacgtggacgcacgggactgcgagaacaacacaccgctgcacatcgccgcctgcaacggc
tgcccagagatcatggtgcttctcatgaaggccggggcgcactttgacgccaccaacgcg
cggaggaaggcggcctacgaactgctagacgagcacaatatgggtgacccggctctctac
ccgctcaactacatcacccttcagtgcctggcagcccgtgcggtggaaaagcacagactt
ccttacaggggactcatcaccgaggagatggaagcatttatagagctacactga
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