Syngnathus scovelli (Gulf pipefish): 125985175
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Entry
125985175 CDS
T08785
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125985175 (gata6)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125985175 (gata6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
125985175
NCBI-ProteinID:
XP_049603754
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Position
17:complement(9286142..9291640)
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AA seq
511 aa
AA seq
DB search
MDLGETGWSMVKREASSSPGSPAEPSYLQPGDSRRSGGAHTPDELRTPPGAGDLDALQGA
RTLHPYAHFGHHHHHGNPLQSSGGGEDVPLFTDLDQGGKLVLSGGAHKAAAAAGLLVDPS
DMYQSLAIAAAQSQSGYESSSGAYMHSNPNSPVYVPSSRVSSMIPSLSYLQAGGSAQPGH
AVSGHSVWSQPAPESPSYGAGSPHAHATSGRFHYPPSPPMNNGGGTSRDIGYGNSLNVAN
RAEQYGLSRPLGAAYPAAYSPYVAPQLSQLPSPWTSGPFDNGMLHTLQSRAAPLIRGSNG
VSDLLDDMSESRECVNCGSISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRTST
SRRIGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPK
TLNKTKGGSGSSNSVAMTPTSTSSSNSEDCSKTSSPSTQVSGVSSSVLPVSGEGSVLKYP
GPEGLYGAVGLAQTSDVGSVRGEPWCPMALA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggcgaaaccggctggtccatggttaagcgagaagcatccagcagcccaggg
tcaccggccgaaccgagctacctgcagcccggtgacagccggcggagcggcggcgcccac
accccggacgagctgaggactcccccgggcgcgggcgacctcgacgcgctgcagggcgcc
agaacactccacccgtacgcccacttcggacaccaccaccaccacggcaacccgctgcag
agctccggcggcggcgaggacgttcctctctttacggatctagatcagggcggcaagctg
gttctgtccggcggggcgcataaggccgccgccgccgcgggcctgctggtggatccgtcg
gacatgtatcaaagcttggccatcgccgcggcccaaagccagagcggatatgagtcctcc
tcgggggcttacatgcactccaaccccaactcccccgtgtacgtgcccagctcgcgggtg
agctccatgatcccaagcctgtcgtacctgcaagccggcggctcggcgcagccgggccac
gcggtctccggccactctgtgtggtcgcagccggcaccggagagcccgtcctacggcgca
gggagcccgcacgcgcacgccacgtcgggccgcttccactacccgccgagcccgcccatg
aacaacggcggcggcacgagcagggacatcggctacgggaactcgctgaacgtggccaac
cgggccgagcagtacgggctctcgcggccgctcggcgcggcctacccagcggcttactcg
ccctacgtggccccgcagttgtctcaactgccgtcgccgtggacgagcgggccctttgac
aacggcatgctgcacaccttgcaaagcagggccgcgcccttgattcggggatccaacgga
gtgtcggatctcctggacgacatgtctgagagcagggagtgcgtcaactgcggctccatc
tccacgccgctgtggaggcgcgacggcaccggacacttcctatgcaacgcctgcggcctc
tacagcaagatgaacggcctcagcaggccactcatcaagccgcagaagcgcacgtcgacg
tcccgcaggatcggcctgtcgtgcgccaactgtcagacgagcaccacgacgctgtggcgc
aggaacgccgaaggggagcccgtgtgcaacgcctgtggtctctacactaaattacacggg
gtacctcggccactggccatgaagaaagaaggcatccagactcgaaaaagaaaacccaaa
acactgaataaaaccaaagggggctcaggaagtagcaactctgtcgccatgacacccacg
tccacatcttcgtccaactctgaagactgctccaaaaccagctctccttccacgcaagtg
tccggggtcagctcgtccgtgctgcccgtctcgggggagggctccgtgctcaagtacccc
ggcccggaaggtctgtacggtgccgtgggcctggcgcagacctctgacgtgggctcggtg
aggggggagccctggtgccccatggctctggcttga
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