Syngnathus scovelli (Gulf pipefish): 125985180
Help
Entry
125985180 CDS
T08785
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125985180
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125985180
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125985180
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125985180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125985180
NCBI-ProteinID:
XP_049603760
LinkDB
All DBs
Position
17:complement(8044305..8055239)
Genome browser
AA seq
499 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVGSGDGVSTKLSLP
REDGTCGGSGEDGEGGLSRSYSTGGSSSTLSDLDDIAALPDLFDLPLTPEEASEYCSLEL
LGGSGGTSTGNTSNSSSASSSSSSLSNQNSPQQTMDGSDSNGIQLMHTHSLLGDTHALLD
QLPYDCSVTDLERITQCIVKSHMDTCQYSAEDMKRFTWVQYTLEETLAFQNKSAEWMWQQ
CAHHITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNVNNSTIFFN
GKFASHQFFKALGCDDLVSAVFELGKGLCRLQLSDEEMALFSAAVLLSPDRPWLMDGQKV
QKLQEQVYLALHHSLLKSASEEKLDKMLSKLPIMKSICNLHIDKLEFFRLVHPETAYSFP
PLYREVFGTDMSLPDSTNS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatcgaggtcatcccctgtaaaatctgcggggacaagtcctcggggatc
cactatggggtcatcacctgtgaaggctgcaagggttttttccgtcgcagccagcaaaac
aacgccatgtactcttgctcacgccagaggaactgtttgatcgatcgaacgaaccgcaac
cgctgccagcactgtcgcctacaaaagtgtctggctttgggcatgagtcgagatgcggtg
aagtttggtcgcatgtcgaaaaagcagcgtgacagtctgtacgctgaggtgcagaagcat
cagaaatcccaggagtgtgtgggctccggagatggggtctccactaagctctccttaccc
cgggaggacggcacatgtggcggcagtggagaggacggcgagggaggtttgagccgttcc
tacagcacggggggctccagctccaccctcagcgacctggatgacatcgcagcactcccc
gacctctttgacctaccgctgacccccgaggaggccagcgagtactgcagcttggagcta
ctgggcgggagcggcggaaccagcacgggaaacacctccaactcatcgtcggcttcttcc
tcctcatcatcgctgtccaatcagaattcgccgcagcagacgatggacggctcggacagc
aacggcattcagctgatgcacacgcattcgctgcttggggacacgcacgcactgctggac
cagttgccttatgattgctcggtaacagacctcgagcgaatcactcaatgtatcgtcaaa
tctcacatggatacgtgtcagtacagcgccgaggacatgaagagattcacctgggtacaa
tacacactcgaggaaacgcttgcttttcagaacaagtcagctgagtggatgtggcagcag
tgcgcacaccacatcacaaatgccatccagtatgtggtggagtttgcaaaacgcattgct
ggatttatggacctttgccagaatgaccagattattttgctgaaagcaggatgcctggag
gtcctgctgattcgtatgtgccgggcttttaatgtcaacaacagcaccattttcttcaat
ggaaaatttgcctcgcatcagttcttcaaagcacttggttgtgatgacctggtgagtgca
gtatttgaattgggaaaaggactttgtcgcctccagctgtctgatgaagagatggctttg
tttagtgcggctgttcttctctcccctgatcggccttggctgatggatggccaaaaggtt
cagaagcttcaggaacaagtttacttggctctgcaccacagtcttcttaagagtgcttct
gaggagaaactggacaagatgctgtccaaactacccatcatgaagtcaatttgtaacctc
cacattgacaaactggagtttttccgtttggtccatccagagaccgcatacagtttcccc
ccgttgtaccgggaggtgttcggaaccgacatgtccttgcccgactccaccaacagctag
DBGET
integrated database retrieval system
