KEGG   Syngnathus scovelli (Gulf pipefish): 125985194
Entry
125985194         CDS       T08785                                 
Symbol
hnrnpc
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
  KO
K12884  heterogeneous nuclear ribonucleoprotein C1/C2
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125985194 (hnrnpc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sscv03041]
    125985194 (hnrnpc)
Spliceosome [BR:sscv03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125985194 (hnrnpc)
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 Herpes_UL25 RRM_5 Cwf_Cwc_15
Other DBs
NCBI-GeneID: 125985194
NCBI-ProteinID: XP_049603784
LinkDB
Position
17:9431744..9440126
AA seq 421 aa
MFCMHVLVLETVASRPRWLVFVDTRHLSALHTVKNLRPKGEGSRPQAKVSPSPQCQTQQT
TALHTDAMESPTDPGSRSTAASLMAASNVTNKTDPRSLNSRVFIGNLNTLLVTKADVEAI
FAKYGKIVGCSVHKGYAFVQYANERNARSAVAGEDGRMIVGQVLDINLAGEPKPHRSKTT
KRSAGDMYSSSSFELDYDFQRDYYDRMYSYPSRVPAPPPPLSRAVIPSKRPRVSLSGGGG
GGGGGGGGGGGGGGGGCGGGGSSRRTKSSFSSSSKSSQRAYSSRSMKVDELQTIKRELTQ
IKSKVDDLLESLERMEKDHSKKSESKGIKPEPGEVTSPPHPGSKKDEALKRERDSQELND
TDEEEEEEDEEEEEDEEDEEETDLLEEEEEVKSQEQEEEEEEGEHVEGDDDGDSINGEDD
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgttctgcatgcatgtcttagttttggaaacggtagctagccgaccgaggtggcttgtt
tttgttgacactcgccacctatctgcactgcacacagttaaaaatctcaggccaaaaggt
gaaggttcgagaccccaggccaaagtcagccccagcccacagtgtcagacacaacagacg
actgccctgcacacagacgctatggagtcccctactgaccccggcagccgttcgaccgcc
gccagcctgatggccgccagcaacgtgacaaacaagacagatccgcgctcgctcaactcg
cgtgtgttcatcggcaacctcaacaccctgctggtgaccaaggccgacgtggaggccatc
ttcgccaagtacggcaagattgtgggctgctccgtgcacaagggctacgcttttgtgcag
tacgccaatgagcgcaacgcccgctctgccgtcgccggcgaggatggccggatgattgtc
ggccaagtgctcgacattaaccttgccggggagcccaaaccgcatcgttccaaaaccacc
aaacgttcagctggagacatgtatagcagttcctcttttgaactggactacgatttccag
agagattactacgacagaatgtactcgtacccgtcccgtgtgcccgccccacctccgccg
ctctcccgcgccgtcatcccgtccaagcgcccgcgggtcagcctcagtggtggtggcggc
ggcggtggtggtggtggaggaggaggaggcggcggcggaggaggaggttgcggaggggga
ggaagcagccggcgcaccaagagcagcttctcttcgtcctccaagagcagccagagggct
tactcgtctagaagtatgaaagtcgacgagctgcagaccatcaaacgcgagttgactcaa
attaagagcaaagtggacgacctcctggaaagcctggagcgcatggagaaggaccacagc
aagaagtcagagtccaaaggcattaagcccgagccaggcgaggtgacctctccacctcac
ccaggcagcaagaaagacgaggccctgaagcgggagcgggacagccaggagctgaacgac
actgacgaggaagaggaggaggaagacgaggaggaggaggaggatgaggaggatgaagaa
gagacggacctcctggaggaagaagaggaggtgaagagccaagagcaggaggaggaggag
gaagaaggcgagcacgtagaaggggatgacgacggcgacagcatcaatggcgaagacgac
tcgtag

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