Syngnathus scovelli (Gulf pipefish): 125985258
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Entry
125985258 CDS
T08785
Symbol
sec22ba
Name
(RefSeq) vesicle-trafficking protein SEC22b-A
KO
K08517
vesicle transport protein SEC22
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04130
SNARE interactions in vesicular transport
sscv04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125985258 (sec22ba)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125985258 (sec22ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125985258 (sec22ba)
Membrane trafficking [BR:
sscv04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
125985258 (sec22ba)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Sec20
Motif
Other DBs
NCBI-GeneID:
125985258
NCBI-ProteinID:
XP_049603889
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Position
17:complement(9035458..9037850)
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AA seq
215 aa
AA seq
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MILLTMIARVADGLPLAASMQENDQLGRDLQQYQSQAKQLCRKLDAQSPDRCTLEAKDMN
FHYLIADGVCYLSLCEPSFPKKIVFSYLEELHREFSDQYGRKISIVTRPYSFIEFDTYIQ
KTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGESLSALETKGNNLSTLSKKY
RSDAKYLNTRSTYAKVAAVAVFVITLIIYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgattttactgactatgatcgcgcgtgtggcggacggattgccgctagccgcttccatg
caagagaatgatcagttaggaagagacctccagcagtaccagagtcaagccaaacagctg
tgccgcaaactcgatgctcaaagtccagaccgctgcaccctggaagctaaagatatgaat
tttcattatttaatagcagacggtgtttgctacctgtccctttgtgagccatccttcccc
aagaaaattgtcttttcctacctcgaggagcttcacagggagttttctgaccagtatgga
aggaagatttcaatagtgacaaggccgtactccttcatcgagtttgacacatacatacag
aaaaccaaaaagttatacattgacagcagggccaggaggaacttaggtagtatcaacaca
gagctgcaggatgttcaaagaattatggtggccaacatcgaagaagttctacaacgtgga
gaatcactttctgccctcgaaacaaaaggcaacaatctgtccaccttgtcgaagaagtac
cgcagcgacgcaaagtacctcaacacccgctccacgtacgccaaagtggctgccgtggcc
gtcttcgtcatcacgctcatcatctacgtccgattctggtggctgtga
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