Syngnathus scovelli (Gulf pipefish): 125985305
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Entry
125985305 CDS
T08785
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125985305 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125985305 (exosc4)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125985305 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
125985305 (exosc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125985305
NCBI-ProteinID:
XP_049603972
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Position
17:6363803..6365125
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRTLHDRAVINCQYSMATFSMSERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGSNYSVCVNAATLAVIDAGIPMLDYVCASTVGFVDETPLADLCYAEESG
GVSSLALALLPRSGQIALLQMDARLHQDHLESMMDAAMTACKGVSKVLDQVVRQHLQEGS
QATGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttggagctgctttctgaccaaggctatcgtctggatggacgcaaagccacc
gagcttcgcaaggttcaagcccgcatgggagtgttcgctcaggctgacggctcagcgtat
ttggagcagggaaacactaaagccttagcggttgtgtacggtccacacgaaatgcgaggc
tcccgtagtcgaacccttcacgaccgggctgtcatcaactgccagtacagcatggccact
ttcagcatgtcagagaggaaaaggaggccacacggcgaccgcaagtccactgagatgagc
ctccacctcaagcagacctttgaggccgcagtgatgacgcaactctatccacgttctcag
attgacatttacgtgaagatcctccaatcagatggaagcaactacagcgtgtgcgtaaac
gctgccaccctagccgtgatcgatgccggcatacccatgttggactatgtgtgcgcctcc
actgtgggcttcgtggacgaaacgccactggccgacctatgctacgctgaagagagtggc
ggcgtgagctccttggcactagcgctgctgcctcgcagcggacagatcgcgcttctgcaa
atggacgccaggctacaccaggaccatctggagtccatgatggatgccgccatgacggcc
tgcaaaggtgtgagtaaggtgctggaccaggtggtgcgtcaacacctccaagaaggctcg
caggctactggagactga
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