Syngnathus scovelli (Gulf pipefish): 125985340
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Entry
125985340 CDS
T08785
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sscv04040
]
125985340 (lrrc8da)
Ion channels [BR:
sscv04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
125985340 (lrrc8da)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
125985340
NCBI-ProteinID:
XP_049604049
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Position
17:complement(4447588..4452753)
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AA seq
837 aa
AA seq
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MMFTVTEFASLNDVHPTYRILKPWWDVFMDYLSLVMLMLALFAMTMQITKDQLACLPFMD
ETQENSRNDSDPAQNAQQVPAAINIKSAVQNFQPQYEDTDKREENCNHRPQAPGIKTNLD
FQQYVFINQMCYHLVLPWYSKFFPYLILINTVILMVSSNFWFKFPKTSSKIEHFVSILCR
CFESPWTTKAVSETACEESEKNKQRLSGNSFAHHTASLEGNEEGPGSMSTSPMLDGVVSA
DNPIAEAPTATMPILDKKDGEQAKALFEKVRKFRAHVEDNDFIYRFYAAQTIFKTATFIS
MLSYTSSFLVKIHFEHICETDVKALVGYGRFYCTHNMAFMLEKVLFCYIALMILYGMVCL
YSLFWVFRGPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRFGVFLSEV
SENKLREISLNHEWNFKKARKCVTRNAQDQQELHLKNLFGLPNVVFDLTDLEVLKLEKIP
EVRFTANVSQMTSLRELHLYECPAKVEQTGFAFLRDHLHSLHISFTDVAEIPTWIFLLRN
LRQLYIVGNLSSENNRMFGLESMRDLRHLKILYLKSNLPKLPTNITDVSQHLVKLMVHND
GTRLFGLNTLKKMTNLIDLELHSCELEKIPHAIFSLLNLQELDLKSNNIRTIEEIVSLQH
LKRLTCLKLWHNKITSIPSSIIQGKSLEALHLSHNKLQSLPPALFKLPKLQSLNLAHNLI
QVLPQDVGLLLDLLELDMTSNKLETLPKNLFKCTKLRVLCLGHNDLRELSESVGDLVLLN
HLELKGNSLERLPAQLGNCRRLLRSEFLVEDHLYMTLPVEVRESIGRDSNIASTSVL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacagtgacggagtttgcgtccttgaatgatgtccatccgacgtaccgcatc
ttgaagccatggtgggatgtcttcatggactatttgagcttggtcatgctcatgttggcc
ctattcgccatgaccatgcagatcaccaaggaccagctagcgtgccttcctttcatggac
gaaacacaggagaactctcgaaatgactctgaccccgcacagaatgctcagcaagtacct
gctgcgataaacatcaagagtgccgtgcaaaactttcagcctcagtatgaagatactgat
aagagagaagagaattgtaatcatcggcctcaagcaccgggaatcaagaccaatttggac
tttcagcagtacgtgttcatcaaccaaatgtgttatcaccttgtgttgccctggtattcc
aaattcttcccttatctcatcctgattaacaccgtcatcctgatggtcagcagcaacttc
tggttcaaatttcccaagacgagctcaaaaatagaacactttgtctccattctgtgtcgc
tgtttcgaatctccgtggaccaccaaggccgtgtcggaaacagcctgcgaagagtcggag
aagaacaagcagaggttgagcggcaactctttcgcgcatcacaccgcgtctttagaaggc
aacgaggaaggccccggttctatgtccacctctcccatgctggacggcgtggtgtcggcg
gataatcccatcgccgaagccccgacggccaccatgcccatcttggataaaaaggacggg
gagcaggccaaagccttgtttgagaaagtgcgcaagttccgagctcacgtggaggataac
gatttcatctacaggttctacgcggctcagaccatcttcaaaacggccacctttatttca
atgctgtcctacacctccagctttttggtgaaaattcattttgagcatatatgtgagact
gacgtcaaagcgctggtgggctacggacgcttctattgtacgcacaacatggcgttcatg
ttagaaaaggtcctcttttgctacatagctctgatgatcttgtacgggatggtgtgtctc
tactccctcttctgggtattccgaggacctctgaaagagtattcctttgagaaagtcagg
gaagagagcagctttagtgacattccagatgtcaaaaacgactttgctttcctcttacac
atggtcgaccagtacgaccagctctactccaaacgcttcggcgtcttcctgtccgaggtg
agcgagaacaaactgagggagatcagcctcaatcacgagtggaacttcaaaaaagcccgg
aaatgcgtgactcgtaacgcgcaagatcagcaagagctgcacctgaagaatctcttcggt
cttccaaacgtggtctttgaccttaccgacttggaggtgctcaagctggagaagattccc
gaagtcaggttcaccgctaacgtgtcccagatgaccagtctgagggagctgcacctctac
gagtgtcccgccaaagtggagcagaccggattcgctttcctccgcgatcatcttcacagc
cttcacatcagtttcacagatgtcgccgagatcccgacatggatcttcttgctgaggaat
ttgcgacagctctacatcgtcgggaacctgagctcggaaaataacaggatgttcggttta
gagtccatgcgggacttgaggcatttaaagattttgtacctgaagagcaacctcccaaaa
ttgcctaccaacatcacagacgtgtcgcagcacctggtgaaattgatggtgcacaacgac
ggcacgagactcttcgggctgaacactctgaaaaaaatgaccaatctcatcgacctggag
ttgcacagttgcgagctggagaagatccctcacgctattttcagcttgctcaacctgcag
gagctcgatctgaagtccaacaacatccggaccatcgaggagattgtcagcctgcagcac
ctcaagagactgacgtgtctcaaattgtggcacaacaaaatcacgtcaatcccctcctcc
atcatccagggcaagtcgctggaggctctccacctctcgcacaataaattgcagtccctg
ccgccggcgttgttcaaactacctaaactgcaatctttgaatctggcccacaacttaatc
caggtgctccctcaggatgtcggtcttctgctggacctgctggaactggacatgacttcc
aacaagctggagaccttgcccaagaatttgttcaagtgcaccaagctgagagtgctttgc
ttgggccacaacgacctgagggaactgtcagagtctgttggcgacctggttctgctcaac
catctggagctgaagggcaacagtctggaaaggctccctgcgcagctcggaaactgccgc
cggctcctcagaagtgagttcctggtggaggatcacctctacatgaccctgcccgtggaa
gtcagggagagcatcggccgagacagcaacatcgccagtacaagtgtcttgtag
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