Syngnathus scovelli (Gulf pipefish): 125985348
Help
Entry
125985348 CDS
T08785
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125985348 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125985348 (gtf2b)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
125985348 (gtf2b)
Prokaryotic type
Archaeal type
TFB
125985348 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
125985348
NCBI-ProteinID:
XP_049604060
LinkDB
All DBs
Position
17:4453484..4456139
Genome browser
AA seq
318 aa
AA seq
DB search
MASTSRGDGSTLPRVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIAMK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDTAGVADVTIRQSYRLIYPRAAE
LFPLDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacaagccgtggtgatggatcgaccttgcccagggttcagtgtcccaaccac
cccgatgctatcctggtggaagactaccgagcaggagacatgatttgccccgagtgtggt
cttgttgtaggtgaccgtgtgatcgacgttgggtcagagtggaggacgttttccaatgag
aaagccctcaaagatccatccagagtgggcgacgcccagaacccgctgctgaatggagga
gatctcaccaccatgattagcaagggaacaggggccgctagttttgacgagtttggcaac
tccaagtaccagaaccgccgcaccatgagcagctcggaccgggccatgctcaacgccttc
aaagagatcaccaccatggctgatcgcattaatttgccaaggaacattatagacagaacc
aacaacctattcaagcaagtttacgaacaaaagagcctgaagggccgagccaacgacgcc
atcgcatctgcctgcctctacattgcctgcagacaagaaggcgtccccagaacgtttaaa
gaaatctgcgccgtgtcccgcatctccaaaaaggagatcggccgctgcttcaagttgatc
ctgaaggccctggagaccagtgtggacctcatcaccacaggggacttcatgtcccgcttc
tgttccaatcttggcctgcccaagcaggtgcagatggccgccacgtacatcgccatgaag
gccgtcgagctggacctggtgcccggcaggagccccatctccgtggccgccgccgccatc
tacatggcctcgcaggcctctgccgagaagaagacacagaaagaaatcggagacaccgcc
ggtgtcgcagacgtgaccatccgacagtcgtaccggctcatctaccctcgcgccgctgaa
cttttccccttggacttcaaattcgacacacctgtcgacaagctgccccaactgtga
DBGET
integrated database retrieval system
