Syngnathus scovelli (Gulf pipefish): 125985349
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Entry
125985349 CDS
T08785
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125985349
Transcription factors [BR:
sscv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125985349
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125985349
NCBI-ProteinID:
XP_049604062
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All DBs
Position
17:complement(4491303..4492574)
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AA seq
222 aa
AA seq
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MNVWSDLEMPKPLEHIKRPMNAFMVWSRGQRRQMAQDNPKMHNSEISKRLGAEWKNLSDS
EKRPYIDEAKRLRAQHMREHPDYKYRPRRKPKTLPQAERLVFPHVEPLKGFSVDSSFLIH
GDKPPTLLAPSPVRHLHRMAEFQSPLSGYSAPAFGYHSGAVVGGLACLGQHTHASPGSPY
VVPCNCGAWSAAGVQPQVAYILLPGGMTKNGVDSYAAPGASA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtggtcggatttggaaatgcccaaacctttagagcacatcaagagacccatg
aacgcgttcatggtgtggtccaggggtcagaggcgccagatggcccaggacaacccaaag
atgcacaattcggaaataagcaagagactgggtgccgagtggaaaaacctcagcgactcc
gagaagcgtccttacatcgacgaggccaaaaggctccgggcgcaacacatgcgagaacac
ccggactacaagtacagaccccggcgcaaacccaaaactcttcctcaagcggagcgcctc
gttttcccgcatgtggagcccttgaagggattctccgtggactcgtcctttctcatccac
ggggataaacctcccactctcctggcgccgtcccccgtgagacatctccatcggatggcc
gagttccagtcgcctctgagcggctacagcgcgcccgccttcgggtaccactccggggcg
gtggtcgggggtttagcttgtctcggacagcacacccacgcgtcgcctggtagcccctat
gtggtgccgtgcaactgtggagcgtggtcggcggccggtgtgcagcctcaggtggcctac
attctactcccgggagggatgaccaagaacggcgtggactcgtacgcagcacccggagcc
agtgcgtaa
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