Syngnathus scovelli (Gulf pipefish): 125985482
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Entry
125985482 CDS
T08785
Name
(RefSeq) microtubule cross-linking factor 1
KO
K27704
microtubule cross-linking factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125985482
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125985482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
125985482
NCBI-ProteinID:
XP_049604346
LinkDB
All DBs
Position
17:7350286..7367654
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AA seq
1829 aa
AA seq
DB search
MMETSNGSAGSDTRPSQPEKKRPNRVPSPARPFLKDVHARATKPPVIGPKSPKLGKQQGP
NRGSRRNLAAAKEKPAAGARSSPKAGLVKRPGRLPGAELKAACSPTLSKTKKERLVPACS
GQIGHGSPVRVPTGHVGQTDSSSDLSDCPSELAPVASSDAESGTGSSDKDQPGSEHPLRT
QPPLMPSPLLPNPAPKATVCLVRPGPEKKPKGTEEELLREIEDLKSENDYLKDEAEELRA
EMEELRDTYMDEEVYQLQELRRELERSNKNCRILQYRLRKAEQKGLRAAQTGHVDGELLR
ALEQDLKVAKDVSVRLHNELESVEDKRSRAEDENEQLRQRIIEVEIAKQALQNELERAKE
TASRRRGSSFKDKKSTSQEDSADLRCQLQFAKEESGLMRKKMAKLGREKDELEQELQKYK
SVYGDVDSPLPLAECFGSSGGGPHSTREAELRLRLKLVEEEANILGRKIVELEVENRSLR
AENDDIRCQYERDCFGREPFSSMPSSPYGGGDVLESAGELRRHLQFVEEEAELLRRSISE
IEDHNRQLTSELNRFKFSTEDGTTEGLFKPANGSGGGLMMEELKSARMQINDLSGKVMKL
QYENRVLLSNVQRCDLAAHLGLRTGSPRDSDADSDAGRREAAEDEEAGRLLLLQPKREGP
IGGESDSEDLFEKTTTTTSGFASLRPSDGMELNAAELANRRREERESFANVKREADRLGK
SVDRLITDTDSLILEGGLLVTTAEGSQGGGDSQVLDTVNTRMKAFRTELHIFVEKLEHVG
DGLRERTDDLSPMPNLTESSSFLSTVTSMSRDSPIGNFGRDLMTDFQSDQRDELEWRIGQ
ERGVEPHNQSRGGAAGLARYHRPLVLRTELREVPALDVQLRPDHERRIRVVTDERDTAVI
SMPQEDDRSRSEPQRARLELPGLLQGPEASWAQERATLLQEIRLFRRNTAIFYMKLKSTL
VRWRLGSRDAALPEDRARPEVEKSEGVSEISGMTQQMEVDGAPDGHLQYQQQFGENRRML
QALRSLLEHFREELREEEVRRCQLQQAYANDKATWEVKRAEMKCQLAKVEEEARGRTRGQ
AQGGEGEMAPLDSEWAVKQEREEHRRMLAESHKTSLDLRWRLQHGEKRWSRERAELLEHF
ERQRQEWDGSTRDLHHKMEKLQRELNCRRGEGAEDNGASIGGRSPRSPRSPQSPRSSASI
LMPPARSLSDSDAVLLEQGGTAAVRLRKPTESPFLDESPFLDALTLDPLTSLEVPPPCRL
ESDKRFPCLKEALNVISEREGASELYPDEEMSGGSLLRAKSVCSMSDFQRLMDSSPFLPD
KTRHGEQGHDDVTPPLSPDDLKYIEEFNNKGWDFASSTWAGKTSETRGLEPFTEPFQPPS
WFLTTSASLTTATTSSSTLNSRVGMGEGVHILHSPTRAGPEPESDVHYAKGNKARGDGET
ASGSDEVLAGGRWPCGLLETGGLRTSPNQSPICSTVGYASSLELQLARNMSDDMKEVAIS
VRNAIRTGPPGPVLRDIACQTNGFTTRGTQTTQTISVGLQTDLLRNLTSSPHRCLTPKGG
STPISSPSRNTRKVQYSPVIQSKFERPCCLPKYGSPKLQRRTSSSNKAEIPNAGRAATPT
TPQKGNSESAWARSTTTRDSPVHTTINDGLSSLFNIIDHTPVVYDAVPKFNKSPSRSRPT
TGAEPAPEPRSTRGRSPSPVQLIVETQGEHNAEVVSIRQDLSAPPGYTLAENAARILNKK
LQDERRAQAGGGSKMAEAEKAQPGCMEDLPRSPVAPPLDSCFLRPARPANRRPPSRWANL
SPPHSSASGRRFTFPPPGRRVSVLEGDRA
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacctccaatggttctgcaggcagcgacaccagaccgagccagccggaaaag
aagagacccaatcgggtgccctccccagccagaccttttctgaaggacgtgcacgcccgc
gccactaagccgccggttattggacccaaatcacccaaactcggcaagcaacagggtccc
aaccgcggctccagacgcaatctcgcagcggcgaaagagaagcccgccgcgggcgccagg
agtagccccaaggccgggctggtcaaaaggccaggcaggctccccggagcagaacttaaa
gcagcctgcagtccgaccctctccaagaccaagaaggagaggctcgtcccggcgtgctcc
ggccaaatcggacatggctccccagtccgggtaccgaccggtcatgtcggtcagaccgac
agcagttcggacctgtcggactgcccgtccgagttggcgccggtggccagcagcgacgct
gagtccggtaccggctccagcgataaggatcaaccagggtcagagcatccgttgcggaca
caaccgccgctgatgccgtctcctctgctccctaatcctgcccccaaggctacggtgtgt
ttggtccggcccggtcccgagaagaaacccaaaggaaccgaggaagaactgctgagggaa
atcgaggatttgaaatctgagaacgattatttgaaggatgaagcggaggagttgcgggcg
gagatggaggagctgcgggacacctacatggatgaggaggtttaccagctacaggagctg
cggcgagagctggagcgctccaacaagaactgccgaattctgcagtaccgcctgaggaag
gccgagcagaagggcttgcgcgccgcccagacgggacacgtggacggggagctgctgcgt
gccctcgagcaggatctcaaggtggccaaagacgtgtcggtgcgcctgcacaacgagttg
gagagcgtggaggataagcgaagccgagctgaggacgagaacgagcagttgcgccagagg
atcatcgaggtggagatcgccaagcaggcgctgcaaaacgagctggagcgagccaaagag
actgcgtcgaggagacgggggagctcatttaaggacaaaaaatccaccagccaggaggac
agcgcagacctcaggtgccagctccaattcgccaaggaggagtcaggtctgatgcgtaaa
aagatggccaagctaggtcgggagaaagacgaactggagcaggagctacagaagtacaag
tcggtctacggagacgtggacagcccccttcccctggccgagtgcttcggcagcagcggc
ggcggccctcattccactcgtgaagcagagctgcgactgcgtctcaagctggtggaggag
gaagccaacattctgggaaggaagatcgttgagttggaggtggagaaccgcagcctgcgg
gccgaaaacgacgacatccgttgccagtacgaacgagactgcttcggcagggagcccttc
tccagcatgccctcgtcaccctacggcggcggcgatgtgcttgagtcggccggcgagctt
cgccgtcacctccagtttgtggaggaggaagcggaactgctgcgtcgctccatctcggag
atcgaggaccacaacaggcagcttacttcggagctcaaccgcttcaagttcagcaccgag
gacgggacgacggaaggactttttaaacctgctaatggctctggcggagggttgatgatg
gaggagctgaaatcagctaggatgcagattaatgacctgagcggaaaagtgatgaagctt
cagtacgagaacagagttcttctgtccaacgtccagcgttgcgacctggcggcgcatctg
ggcctgagaactggaagtccgcgagacagcgacgcagacagcgacgccggccggcgggaa
gcagccgaggatgaggaggcagggcgactccttctactccaacccaagagggaaggccca
atcggtggggagagcgactctgaagacctctttgagaaaaccaccaccaccacctcaggg
ttcgcaagcctccgaccgtcagacggcatggaacttaacgccgcagaactcgccaaccgc
cgcagggaggaacgagaatcctttgccaacgtgaaaagagaggcagatagactcggaaag
tcggtggaccgtctgatcactgacacggacagtctgatcctggagggtgggcttctggtg
acgacggctgagggttctcagggaggaggcgactcccaagtcctggacaccgtcaatacc
cgcatgaaggctttccgcactgagttgcacatcttcgtggagaaactggaacacgtcggt
gatggactgagggagaggacggatgacctgtccccgatgccaaacctgacagagtccagt
agcttcctatccacggtcacctccatgtcccgggattctcccattggcaattttgggaga
gacctgatgacagactttcagtccgatcagagggatgagctggagtggcgcataggacag
gagcgaggcgtggagccccacaaccagagcaggggaggtgctgcgggactcgctaggtac
cacagaccactggttttaagaacagagctgcgggaggttcctgccctcgacgtgcagctt
cgtccggatcacgaacgacggattagagtcgtgacagatgaacgggatactgcggtcatc
tcgatgcctcaagaggacgatcgttcacgctcggaaccccagcgagcgcgtctggagctg
ccgggcctcctccagggtccggaagcttcctgggctcaggagcgagccaccctgctgcaa
gaaattcgcctcttccgacgcaacacggccattttctacatgaagctcaaatccaccttg
gtacgttggaggctcggaagcagggacgctgctttgcccgaggaccgtgcacggcctgag
gtggagaagtcggagggcgtctctgagattagtggaatgacgcagcagatggaggttgat
ggggcgcctgatggacacctgcagtaccagcaacagtttggggagaacagacggatgcta
caggcgctacgcagcctgcttgagcactttcgggaagaactgcgtgaggaggaggtgcgg
cgctgccaactgcagcaggcttacgccaacgacaaagccacctgggaggtgaaacgggcc
gagatgaagtgccagctcgctaaggtggaggaggaggcgcgaggaagaacgcgaggccag
gctcaggggggtgaaggggaaatggcgcccctggactccgagtgggccgtgaagcaggag
cgcgaggagcaccggcgtatgttggctgagagccacaagacctcactggacctccgctgg
cggttgcagcacggcgagaagcgatggagccgcgagagggccgagctgctggagcacttt
gagcgtcagaggcaggagtgggatggcagtacccgcgatctccaccacaaaatggagaag
ctccagagagagctgaactgccggcgaggtgagggcgcagaggacaacggcgcatccatc
ggtggccgctccccacgttccccacgttctccccagtccccgcgttcctctgcatctatc
ctgatgccgccggctcgttccctctccgactcggacgccgtgttgttggaacaaggaggg
actgccgccgtgaggcttcgaaagcccacagaaagccccttcctggatgaaagccccttc
ctggatgctcttactttggatcccctcaccagcctggaggtccccccgccttgcaggctg
gagagcgacaagaggttcccctgcttgaaggaggccctcaatgttatatcggagagagaa
ggagcttccgagttgtaccctgatgaggaaatgagtggtggtagtttgcttcgagccaag
tcggtatgttccatgagcgacttccagcggttgatggacagctcaccgtttctccccgac
aagacgcggcacggcgagcaaggccacgacgacgtcaccccgcctctttcgccagatgac
ctcaagtacatcgaggagttcaacaataagggctgggacttcgcgtcatcgacgtgggcc
ggcaaaacctcagagacgcgggggctggaaccgttcacggagcccttccaaccgccctct
tggttcctcaccaccagcgccagcctgaccaccgccaccaccagcagcagcacacttaac
agtagggtaggtatgggagaaggggtccacatcctccatagccccacaagagctgggcca
gagccagagtctgacgtccattacgcaaaggggaacaaggccagaggtgacggggagacg
gccagcgggtcagatgaggtgttagctggtggaaggtggccgtgtggccttctggaaacc
gggggattaaggacttccccgaaccagtcacccatttgctccacggtgggctacgcctcc
tccctggagctccagctggctcggaacatgagcgatgacatgaaggaggtggccatttcg
gtgaggaacgccatccgcaccggcccacctgggccagtgctacgtgatatagcgtgtcaa
accaacggcttcaccacgcgaggcactcagaccacgcagaccatcagcgtgggtctgcag
acggaccttctgaggaacctgaccagcagcccccaccgctgcctcactccaaaagggggc
agcacccccatttcatccccctcacgcaataccaggaaggtccagtactcgccggtcatc
cagagtaaatttgagcggccctgctgcttgcccaaatatgggtcgcctaaacttcagcgc
aggacctcgtcatccaacaaggcggagatacccaacgccggccgagccgccacccctacg
accccccagaagggcaacagcgagtcggcgtgggcacgctcaaccactacgcgggatagc
ccggtccacaccaccatcaacgacggtctctccagcctcttcaacatcatcgaccacacc
cccgtcgtctatgacgccgtgcccaagttcaacaagtcccccagccgctcgcgccccaca
acgggcgccgagcccgccccggagcccaggagcaccaggggccgctcccccagccccgtg
cagctgatagtggaaacgcagggggagcacaacgctgaagtggtcagcattcgacaggac
ctgtcggcacccccggggtacacgctcgcagagaacgccgcccgcatcctcaacaaaaaa
ctgcaggatgagaggagagcgcaggcaggaggaggaagcaagatggccgaagcagagaaa
gcacagcctggatgcatggaggacctgcctcgatctccagtggcgccgcccttggactcc
tgcttcctacggccggcccgcccagccaatcgccgccccccttcacgctgggccaacctc
tcgccgccgcactcttcggcgtccggtaggaggttcaccttcccgccgccgggacggcgt
gtgagcgtcctggaaggcgaccgggcgtga
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