Syngnathus scovelli (Gulf pipefish): 125985635
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Entry
125985635 CDS
T08785
Symbol
nrp1a
Name
(RefSeq) neuropilin-1a isoform X2
KO
K06724
neuropilin 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125985635 (nrp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sscv04090
]
125985635 (nrp1a)
CD molecules [BR:
sscv04090
]
Proteins
125985635 (nrp1a)
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GFIT
Motif
Pfam:
CUB
F5_F8_type_C
DUF3481
MAM
F5_F8_type_C_2
CUB_animal
CUB_M02D8_5_2nd
DUF3789
CDCP1_CUB_6
Motif
Other DBs
NCBI-GeneID:
125985635
NCBI-ProteinID:
XP_049604530
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Position
18:8214241..8249987
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AA seq
924 aa
AA seq
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MHCGLVFVLLMGFLLVAKAFKNDKCGGNIRISNANYLTSPGYPQSYTSSQRCTWVISAPG
PHQRILINFNPHFDLEDRECKYDYVEVRDGVDESGQLVGKYCGKIAPSPVVSVGNQLFIK
FVSDYETHGAGFSIRYEIFKTGPECSRNFTSNSGVIKSPGFPEKYPNNLDCTFMIFAPRM
SEMILEFESFELEPDPTPPAGVFCRYDRLEIWDGFPGVGPYIGRYCGQNTPGRIISYTGI
LALTINTDSAIAKEGFSANFTVIERTVPEDFDCGDPLGMESGEITSDQILASSQYNPSWS
SERSRLNYYENAWTPELDSNKEWIQVDLGFLRFVSAIGTQGAVSQETHRTYFVKSYKVDV
SSNGEDWITLKEGSKQKVFQGNTNPTDIAKTMIPKPTLTRFIRIRPVTWETGIALRFEVY
GCKISEYPCSGMLGMVSGLITDNQITASSHTDRSWVPDNARLLTSRTGWTLLPQPQPFTR
EWLQVDLGEEKVVKGMIIQGGKHRENKVFMKKFRLGHSNNGSEWRMVLDTNGNKPKLFEG
NSNYDTPELRTVEPLLTRFIRIYPDRATATGMGLRLELLGCDIEAPTVPPSTTLPTSSPS
DECDDDQANCHSGTGDDYDNTGSTTMPETTTAAADLVPDFLWFACDFGWANDPSFCRWTS
EDTVSRWQIQSSGTPTLNTGPNMDHTGGSGNFIYTLATGSQDTEVSRLVSPEVISPDSDL
CVSFWYHMFGSHIGTLHIKQRKQTVDGPADILLWTVSGHQGNRWREGRVLLPRTNWPYQV
VIEGSVERKSWGDIAVDDIKVLSGLTATECKDPDVPTEPMLPEDHFNEIIEEITEYPDFV
ETNQISGAGNMLKTLDPILITIIAMSALGVFLGAICGVVLYCACSHGGMSERNLSALENY
NFELVDGVKLKKDKLNVQSSYSEA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtggattagtttttgtcctgttgatgggattcctcttggtggccaaggctttc
aaaaacgacaaatgtggaggcaacatccgaatctcaaacgccaactacctcacatctccc
ggctacccccagtcttacacctcttctcagcgctgtacatgggtgatctcggcccctggc
ccccatcagcggatcctcatcaacttcaatccacattttgacctggaggatcgggagtgc
aagtatgactacgtggaagtccgagatggcgtggatgagagtggtcagttggtgggcaag
tactgcgggaagatcgccccatctcccgtcgtctccgtcggaaaccagctcttcatcaaa
tttgtctccgactacgaaacccacggagctggtttctccatacgatatgagatcttcaaa
acaggtcctgaatgctccaggaacttcacctccaatagcggtgtcataaaatcaccgggc
tttccagaaaagtaccccaacaacctggactgtacttttatgatatttgccccaaggatg
tcagagatgatcttggagtttgagagctttgagttggaacctgacccaacgcctccagct
ggcgtgttctgccgttatgatcgtctggaaatctgggatggctttcctggagtcggaccg
tacattggacggtattgtggacaaaacacacccggaagaatcatctcttacactggcatc
ctggcacttacaatcaacacggacagcgctattgccaaggagggtttttctgccaacttc
acagtcatcgaaaggaccgttccagaggactttgattgcggtgacccgttgggaatggaa
tctggtgagataacatccgaccaaatcctggcctcatcccagtacaaccctagctggtcc
tctgagcgttccagactcaactactatgagaacgcgtggacccctgagctggactccaac
aaggagtggatacaggtggacctcgggttcctacgatttgtctcagccatcggtacacag
ggtgcagtttcccaggagacccacaggacttattttgtcaagtcctacaaagtcgacgtc
agttcaaatggagaagactggatcacgctcaaggagggctcgaaacaaaaggttttccaa
ggcaacaccaatccaacagacattgccaagacgatgatacccaaacccactctgacgcga
ttcatccgcatccgtcccgttacctgggaaacaggcatcgcactgcgctttgaagtgtat
ggatgtaagatatcagagtacccatgctcgggcatgctgggtatggtatcgggtttgatc
accgacaaccaaatcacagcgtcgtcacacacggaccggagttgggtcccggacaacgct
cgtctgctgacgagcaggacaggttggaccctgctgcctcagccccagcctttcaccagg
gaatggttacaggtggatctgggggaagagaaagtggtcaagggaatgatcattcaggga
ggaaagcaccgtgagaacaaggtcttcatgaagaagttccgccttggccacagcaataat
gggtctgagtggaggatggttctggacaccaacggaaacaagccaaagcttttcgaagga
aacagcaactacgacactcccgagttgaggacggtggaaccgctactaacccgcttcatc
cgaatctacccggatagggcgaccgcgaccggaatgggccttcgacttgagctcctgggc
tgtgatattgaagctcccacggtccccccttccacgactctcccgacctcgtccccgtca
gacgaatgcgacgacgaccaagcaaactgccacagtggcacaggtgatgactacgataac
acaggtagtacaacaatgccagaaaccacaacggctgcagccgatctcgtcccagatttt
ctttggttcgcctgcgactttggctgggccaatgacccgtccttctgcaggtggacttct
gaggatactgtctctcgatggcaaatccagtctagcggaacccccaccctcaatactgga
cccaatatggatcatacaggtggctcaggaaatttcatttacaccttggcgacgggttca
caagacacagaggtgtctcggctggtcagcccggaggtcatctcccccgattcggacctg
tgtgtgtcattctggtaccacatgttcgggtcacatattggtacactacatatcaaacag
cgcaaacagactgtcgacggacccgctgacatcttgctgtggaccgtcagcggtcaccag
ggtaaccgctggagggaaggtcgtgttctcctgccacgcactaattggccctatcaggtg
gtgattgaagggtcggtagagagaaagagctggggagatatcgccgtggatgacattaag
gttcttagtggactcactgcaacagaatgcaaagatccagatgtacctaccgaaccaatg
ctgccagaggatcactttaatgaaatcattgaggagatcacagaatatcccgactttgtg
gagaccaaccagatcagcggagccggcaatatgttaaagacactcgaccctattctcatc
accatcatcgctatgtccgccctgggcgttttcctgggcgccatttgcggtgttgtcctt
tactgcgcctgctcgcatggcggcatgtcagaaaggaacttatcagccctggaaaattat
aactttgaactggtggacggggtcaagttaaagaaggacaaactcaatgtacagagctca
tattcggaggcgtga
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