KEGG   Syngnathus scovelli (Gulf pipefish): 125985635
Entry
125985635         CDS       T08785                                 
Symbol
nrp1a
Name
(RefSeq) neuropilin-1a isoform X2
  KO
K06724  neuropilin 1
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125985635 (nrp1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:sscv04090]
    125985635 (nrp1a)
CD molecules [BR:sscv04090]
 Proteins
  125985635 (nrp1a)
SSDB
Motif
Pfam: CUB F5_F8_type_C DUF3481 MAM F5_F8_type_C_2 CUB_animal CUB_M02D8_5_2nd DUF3789 CDCP1_CUB_6
Other DBs
NCBI-GeneID: 125985635
NCBI-ProteinID: XP_049604530
LinkDB
Position
18:8214241..8249987
AA seq 924 aa
MHCGLVFVLLMGFLLVAKAFKNDKCGGNIRISNANYLTSPGYPQSYTSSQRCTWVISAPG
PHQRILINFNPHFDLEDRECKYDYVEVRDGVDESGQLVGKYCGKIAPSPVVSVGNQLFIK
FVSDYETHGAGFSIRYEIFKTGPECSRNFTSNSGVIKSPGFPEKYPNNLDCTFMIFAPRM
SEMILEFESFELEPDPTPPAGVFCRYDRLEIWDGFPGVGPYIGRYCGQNTPGRIISYTGI
LALTINTDSAIAKEGFSANFTVIERTVPEDFDCGDPLGMESGEITSDQILASSQYNPSWS
SERSRLNYYENAWTPELDSNKEWIQVDLGFLRFVSAIGTQGAVSQETHRTYFVKSYKVDV
SSNGEDWITLKEGSKQKVFQGNTNPTDIAKTMIPKPTLTRFIRIRPVTWETGIALRFEVY
GCKISEYPCSGMLGMVSGLITDNQITASSHTDRSWVPDNARLLTSRTGWTLLPQPQPFTR
EWLQVDLGEEKVVKGMIIQGGKHRENKVFMKKFRLGHSNNGSEWRMVLDTNGNKPKLFEG
NSNYDTPELRTVEPLLTRFIRIYPDRATATGMGLRLELLGCDIEAPTVPPSTTLPTSSPS
DECDDDQANCHSGTGDDYDNTGSTTMPETTTAAADLVPDFLWFACDFGWANDPSFCRWTS
EDTVSRWQIQSSGTPTLNTGPNMDHTGGSGNFIYTLATGSQDTEVSRLVSPEVISPDSDL
CVSFWYHMFGSHIGTLHIKQRKQTVDGPADILLWTVSGHQGNRWREGRVLLPRTNWPYQV
VIEGSVERKSWGDIAVDDIKVLSGLTATECKDPDVPTEPMLPEDHFNEIIEEITEYPDFV
ETNQISGAGNMLKTLDPILITIIAMSALGVFLGAICGVVLYCACSHGGMSERNLSALENY
NFELVDGVKLKKDKLNVQSSYSEA
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgcattgtggattagtttttgtcctgttgatgggattcctcttggtggccaaggctttc
aaaaacgacaaatgtggaggcaacatccgaatctcaaacgccaactacctcacatctccc
ggctacccccagtcttacacctcttctcagcgctgtacatgggtgatctcggcccctggc
ccccatcagcggatcctcatcaacttcaatccacattttgacctggaggatcgggagtgc
aagtatgactacgtggaagtccgagatggcgtggatgagagtggtcagttggtgggcaag
tactgcgggaagatcgccccatctcccgtcgtctccgtcggaaaccagctcttcatcaaa
tttgtctccgactacgaaacccacggagctggtttctccatacgatatgagatcttcaaa
acaggtcctgaatgctccaggaacttcacctccaatagcggtgtcataaaatcaccgggc
tttccagaaaagtaccccaacaacctggactgtacttttatgatatttgccccaaggatg
tcagagatgatcttggagtttgagagctttgagttggaacctgacccaacgcctccagct
ggcgtgttctgccgttatgatcgtctggaaatctgggatggctttcctggagtcggaccg
tacattggacggtattgtggacaaaacacacccggaagaatcatctcttacactggcatc
ctggcacttacaatcaacacggacagcgctattgccaaggagggtttttctgccaacttc
acagtcatcgaaaggaccgttccagaggactttgattgcggtgacccgttgggaatggaa
tctggtgagataacatccgaccaaatcctggcctcatcccagtacaaccctagctggtcc
tctgagcgttccagactcaactactatgagaacgcgtggacccctgagctggactccaac
aaggagtggatacaggtggacctcgggttcctacgatttgtctcagccatcggtacacag
ggtgcagtttcccaggagacccacaggacttattttgtcaagtcctacaaagtcgacgtc
agttcaaatggagaagactggatcacgctcaaggagggctcgaaacaaaaggttttccaa
ggcaacaccaatccaacagacattgccaagacgatgatacccaaacccactctgacgcga
ttcatccgcatccgtcccgttacctgggaaacaggcatcgcactgcgctttgaagtgtat
ggatgtaagatatcagagtacccatgctcgggcatgctgggtatggtatcgggtttgatc
accgacaaccaaatcacagcgtcgtcacacacggaccggagttgggtcccggacaacgct
cgtctgctgacgagcaggacaggttggaccctgctgcctcagccccagcctttcaccagg
gaatggttacaggtggatctgggggaagagaaagtggtcaagggaatgatcattcaggga
ggaaagcaccgtgagaacaaggtcttcatgaagaagttccgccttggccacagcaataat
gggtctgagtggaggatggttctggacaccaacggaaacaagccaaagcttttcgaagga
aacagcaactacgacactcccgagttgaggacggtggaaccgctactaacccgcttcatc
cgaatctacccggatagggcgaccgcgaccggaatgggccttcgacttgagctcctgggc
tgtgatattgaagctcccacggtccccccttccacgactctcccgacctcgtccccgtca
gacgaatgcgacgacgaccaagcaaactgccacagtggcacaggtgatgactacgataac
acaggtagtacaacaatgccagaaaccacaacggctgcagccgatctcgtcccagatttt
ctttggttcgcctgcgactttggctgggccaatgacccgtccttctgcaggtggacttct
gaggatactgtctctcgatggcaaatccagtctagcggaacccccaccctcaatactgga
cccaatatggatcatacaggtggctcaggaaatttcatttacaccttggcgacgggttca
caagacacagaggtgtctcggctggtcagcccggaggtcatctcccccgattcggacctg
tgtgtgtcattctggtaccacatgttcgggtcacatattggtacactacatatcaaacag
cgcaaacagactgtcgacggacccgctgacatcttgctgtggaccgtcagcggtcaccag
ggtaaccgctggagggaaggtcgtgttctcctgccacgcactaattggccctatcaggtg
gtgattgaagggtcggtagagagaaagagctggggagatatcgccgtggatgacattaag
gttcttagtggactcactgcaacagaatgcaaagatccagatgtacctaccgaaccaatg
ctgccagaggatcactttaatgaaatcattgaggagatcacagaatatcccgactttgtg
gagaccaaccagatcagcggagccggcaatatgttaaagacactcgaccctattctcatc
accatcatcgctatgtccgccctgggcgttttcctgggcgccatttgcggtgttgtcctt
tactgcgcctgctcgcatggcggcatgtcagaaaggaacttatcagccctggaaaattat
aactttgaactggtggacggggtcaagttaaagaaggacaaactcaatgtacagagctca
tattcggaggcgtga

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