Syngnathus scovelli (Gulf pipefish): 125985667
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Entry
125985667 CDS
T08785
Name
(RefSeq) rho GTPase-activating protein 29 isoform X1
KO
K20644
Rho GTPase-activating protein 29
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125985667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125985667
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
125985667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
Motif
Other DBs
NCBI-GeneID:
125985667
NCBI-ProteinID:
XP_049604591
LinkDB
All DBs
Position
18:8473945..8488927
Genome browser
AA seq
1309 aa
AA seq
DB search
MLAAMLGHSTGGGSGGGGGSSGGGSKLSQSMSQFSSSSLNTVTSNSSMSDKVSMGRPMPN
LDSLTSDPNYIMQLVTDVRKFADVMLQFRGVYSSGENQACLHKAVHDRLREMLAVLSNLI
SKHRSLNSLDILSSAGMLITTVKGVNLEEVNEENKKNLLRDIDNATEQLAFTVGNVVSEF
LMGDVENGSVLGLPLTQTGRSFDNLPVESGGSGSEKDDPPVPVIVTGPAFRGEEVDRTLQ
QQDNGVESALRYSKAWSKYTKEVLGWVEKRLNMDIELAKSYNKMAESANALASHQQFMPF
RDIYMAAFKNDIEYSKLVLNTTAVLQSNKFMQPLITRKNELDKLRKEMKERWQRELKKMH
EAESALKKARMLQDQRQEEYEKAKVSTSRLEGEQIGGVGGATAAKQLEKRRRLEDDALQK
AEEARVHSKACQIDVEEKKAGLAKTKNDIITQLRKMVFQCDLTLKAVTVNWFHLQQAQVV
SLPVNHQSLCENAKLYEPGLRYIEFVRNLSPESQYLDSSFSSSTGFPLTQHIQSGSHSSF
SNFSQGSLTSDLLDGDGSIRQAKIAERRANNNTDLQALRIRSCNSSQGGGTCSDSESVGG
SSESRSMDSPTASPGDFKRRLPRSPSTGTMSSADDLDEPNSPSDNGLNDLLNEVASSPRF
FRNAQMSKAAQTHKLRKLRALSKCRECDGLVVFQGAECEECSLACHKKCLETLAIQCGHK
KLQRKLHLFGVDFMQIAKNSHDGIPFIIRKCTSEIETRALDMKGIYRLNGAKSRVEKLCQ
AFENGKDLVELSDHYPHDISNVLKLYLRQLPEPLILFRYYNELIGLAKESQRGIAEDLEA
FRLSSSPVTPAQVGVELNRILFKLKDILRQLPSAHYKTLQFLIQHLHRVTEQAEENKMPA
RNLGIVFGPTLIKPRQADADMSLSSVADYPYQALIVELLVRHYHMIFDTPLSPLSGNSPK
EVCSQSSLDLIHPDLGNEQLLNRHSKSVGDIQELSSKNLKRHSSTPPYHLSPEYKDPVLL
LPGDHEDKAFEPGDQVDSEVCNGVIEGAKSSERNLNRSPHVTPTTRVNLRSHRNKFSTRP
VSMPVERSRSQDDENPTWTSSHEEDRKGGIQSIQEVDESEMRGGARYGSTFSNNHTLRRT
WADQYKHRDVASKTTKNISSPESSSEDASLPLENSNSQPNGPFSTSLRAGRILRREENVT
KYNIVSTGYRPSRTLQPPPGTFYKPPSGSRTKSLQTLANSADNEEEEDDELEISVDEPLE
KDAEAEQATASSSHSPNLEDGGLNQTRPLYQRMRSRQLQEVEHREAHFV
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgccatgctgggtcatagtaccggcggaggatccggaggtggcggtggtagc
agcggaggaggaagcaaactctctcagagcatgtctcaattttccagctccagcttgaac
actgtcacttcaaactcctctatgtcggataaagtctccatgggtcgcccaatgcccaac
ctggacagcctcacctcagacccaaactacatcatgcagttggtcacggatgtacgcaaa
tttgctgatgtcatgctccaattcagaggagtttactcctccggagagaaccaagcatgc
ctccacaaggcagtccatgatcgtctaagggagatgctggcggtcctttcgaatctcatc
agcaaacaccggagcctcaactcacttgatatcctgagttcagctgggatgctcatcact
acagtgaaaggagtcaatttggaagaggtgaacgaagagaacaagaagaatcttttgaga
gacatcgacaatgcaaccgagcaattggcattcaccgttggcaatgtagtgtctgagttc
cttatgggagatgtagagaatggatcagtgttagggctccccctaactcagacgggcagg
tcttttgacaacctgcctgtggaatctggaggatccggctctgagaaagatgatccgcca
gttcctgtgattgtaacaggcccagcatttcggggcgaagaagtggatcggacgctccag
cagcaggacaacggggtggagtcagcactacgctactccaaggcctggtccaaatacacc
aaagaagtcctggggtgggtggagaaacgtcttaatatggatatcgagttggcaaagagc
tacaacaaaatggctgaatctgcaaacgccctagcaagtcatcagcaattcatgccgttc
cgtgacatctacatggcagctttcaaaaatgacattgaatacagcaaacttgttctaaac
accacagcggtgctccaaagcaacaaatttatgcagccgctaataacccgaaaaaatgaa
ttggacaaactacgcaaagaaatgaaggagcggtggcagagagagctaaaaaaaatgcac
gaggcggagagcgctctgaaaaaggcacggatgctgcaggatcagcgtcaagaagagtac
gaaaaggccaaggtttctaccagccgcttggagggcgagcagatcggaggagtgggagga
gcaacggccgctaaacaactcgaaaagcgccgcaggttggaagacgacgccctccagaag
gctgaggaggcgagggttcactccaaagcgtgtcaaatcgacgttgaggaaaaaaaagcc
ggtctagccaaaactaagaacgacatcatcactcagctccgaaagatggttttccaatgc
gatctcactctcaaagctgtcacggtcaattggttccacctccagcaggctcaggtggta
tcacttcccgtcaaccaccagagtctttgtgaaaatgccaaactgtatgagcccgggctt
cgctatattgagttcgtccggaatttgtcccccgagtcgcaatatctagattcatctttt
tcatcaagcacaggatttcctctcacccaacacatacaaagtggcagtcactcatccttc
agtaacttctcacaaggatccttgacatcggacctcctcgatggggacgggtccatccga
caagccaagattgcagagcgccgcgccaacaataacactgacctccaagcacttcggatt
cgttcttgcaattcaagtcaaggaggaggaacgtgtagcgactcggaaagtgtaggaggg
agcagcgagtcccgatccatggactcgcctactgccagcccaggagacttcaagaggaga
ttacccagatctccctcgactggcaccatgtcatctgctgatgacctggatgaacccaac
tctccttctgataatggtctaaacgatcttttaaacgaagtcgccagctctccacgattt
tttcgaaacgcacaaatgtccaaagctgctcaaacgcacaagttgagaaaactccgagcg
ctctccaaatgtcgagagtgtgatgggctggtggtgtttcaaggagcagagtgtgaagag
tgttcgttagcttgccataagaagtgcctggagaccttggccattcagtgtggccataag
aagcttcagaggaagcttcacctctttggcgtcgacttcatgcagattgcaaaaaacagc
catgatggcatccccttcatcatacgcaaatgcacgtcggaaattgagaccagagctctc
gatatgaagggtatctaccgtctgaacggcgccaaatcacgcgtggaaaaactgtgtcaa
gcgtttgagaatggcaaggacttggttgagttgtccgaccattacccccacgacatcagc
aatgttctcaaactctaccttagacagcttccagaaccactcatcctcttccgctactac
aacgagcttatcggtttggccaaagaaagccaaagaggaattgcggaagatttagaagca
tttcgcctcagctcctctccagtcacgccggctcaggtcggcgtggagctcaaccgaatc
ctcttcaaactcaaggacatcctgaggcagctgccgtctgctcactacaagaccttgcag
tttctcatccaacatctccaccgggtgacagaacaagctgaagaaaataaaatgcccgca
agaaacctggggatcgtctttgggccaacgctcatcaagccgaggcaggccgatgcagac
atgtctctttcctcggtggcggattacccctatcaggcgctcattgtcgagctcctcgtc
agacactaccacatgatctttgacaccccgctcagtcctctttcaggcaactcgcccaaa
gaggtttgctctcaatcctcactggacctcatccatcctgacttgggaaatgagcagctt
cttaacaggcactcaaagtctgtgggtgacatccaggagttgagctccaagaatttgaag
agacattcctccactcctccatatcacttatcgcccgagtataaagacccagttctgctc
cttccaggtgaccatgaagataaagcatttgaacctggtgatcaagtggattcagaggtc
tgcaatggggtcattgagggggcaaaatccagcgagcgaaatctcaaccgctctccacac
gtcacacctacgactcgggtgaatctccgatcgcaccgtaacaagttctccacccggcca
gtcagcatgccggtagaacgtagtcgtagtcaagatgacgagaatcccacctggacgagc
tcgcatgaagaagatagaaaaggaggcatccagtctatccaagaggtggatgaaagtgag
atgagaggtggagcacgctacgggagcacctttagtaacaaccatactttacgtaggact
tgggccgatcaatataagcaccgtgatgttgcgtcgaaaactaccaaaaatatttccagt
ccagaaagctcatcagaagatgcaagcttgcctctggaaaattccaacagccagcccaat
ggacctttcagcacgtcattgagagccggcaggatattaagacgggaggaaaacgtgacc
aagtacaacatagtctcaacgggttaccgaccttcccggaccctccaaccaccacctgga
actttctataagcctccatcagggagtcgaacgaaatcactccaaacgttagctaacagc
gctgacaacgaagaggaggaggacgatgagttggagatttctgtggacgagcctcttgag
aaggacgcagaggcagagcaggccaccgcctcgtcgtcccacagtccaaatctagaggac
gggggtctaaaccagaccagaccgttataccagagaatgagatccaggcaacttcaagag
gttgaacatcgagaagctcattttgtgtga
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