Syngnathus scovelli (Gulf pipefish): 125985700 Help Entry 125985700         CDS       T08785                                  Symbol rttn Name (RefSeq) rotatin   KO K16484   rotatin Organism sscv  Syngnathus scovelli (Gulf pipefish) Brite KEGG Orthology (KO) [BR:sscv00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sscv03037]     125985700 (rttn) Cilium and associated proteins [BR:sscv03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    125985700 (rttn) SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N Motif Other DBs NCBI-GeneID:  125985700 NCBI-ProteinID:  XP_049604680 LinkDB All DBs Position 18:complement(3824991..3842280) Genome browser AA seq 2196 aa AA seqDB search MELSAIIKKIGHSLVEIRVRALKSILCKLKHSLISIPDIVQEKMLFVYLLEWFNLPEVPM QEEVLDLLLTLSKHPSAAQMLRDVEAEDFLSQLSANVEPRLRAVIDATLDQLFQQPQLIP CRNAVDTHELLNTPPTVHEDVKCLEFSVFPWLTLTNADRHILSSKESSLRSSNPNLVRTT CELLCDVIMQDFPAEIFLQRPNIAKTLLSLLRPGSGKGETCYLHLQAFSCLRQLCVGLRQ RLRFHRDPGFHSAKQGGSAYTVSLNSSYSQASQVFSPAAECSPRPSVVGGTAQRVRGDGQ DGDVGSPSSSSNRSAVASQTARQTPPADVGRLALPDQGLEDEPETVLEQLTLAQFTVATL EHVIPLLKTDASHVFCCVLELLFDTVLLLGDSVSELVWDDGSLMGMELKEKLQTCMDLLA DVLSYHQDYSGSSKVHHTVTYTGSAVFLIKFLQTILPLEKAGGNVPENAVTAIFHLCLDK SFGMALPIMQETAAAYLEQLNSGSHELYGRVTRAALWMESTCGFLKKVQAEGEKNWPELL EMAEQAIEGLPFHQHVPVVKECVQFCSYLWKFDQSSPLLQTESQKLLLKLLSHPLQPIRI ETYTCVLSVVKECLGIHNTSRQESGLCSRVNFLLHHKVLYEISTFGLQDSAEKVNVAAKD ILLFLLKGRLMMTTSTWDRFIAALSRVIAILQGYASTEEPLGSCILLLSDTSGGDGFLST TKLKAALRLLFTRQPTVRIAAVPHILAHLTGADNAKISRPQLDRVVTSSLPDLYCILYPL DVTLDTSHKSVLKVEAVEKLFHMLSSDTLDVALRRSAAEQLSVVLQATTMHPVLKKLGIT DRVISFLTDSVNGNKSLDCILEPCISILRKLAYADPALRNSLAQHNLLLITLLRASLIMK ANKNNGGEAAVLMSLLLFDEISSMAIWSDKSATDGPLPTFSLPVSVVRRYKMPFQAVIHH GVSPYRCVLMPTSDLLPLAPACQTLQLAWNVAWHCSVDNLLEEFHGLTGNAEFHGDLKLS EAQVACLRATHLPRALQDCIQAVVTAAGHNSVIAALSRLNIYLLIERMAVPYAASYRCRE TLQSLSWQAAVTRFLQVRPASVEDERLLAYVVAFLNAYFKDARVRCTDPEDKDLRWMLEL LLNEESVSLLNLLPGAEPGTPDQDSEEPEDVKNYVSQKLQRELTGLFKNVLSQLTCTSDR LCLARAGPFKSQLALGLLQSLRLSDAPHYYGLPNLERSLQGIVSLTAQSGWSLHCLDFLP ATLCAKFLSGLLEVISSFYVKWGGNSMSFMGKGVTKNAVVCLLHLSHEMIAESEDKDIIS MWSLGNESSAEEPNDSQMGLAWLVPLWVDRDQEVRFASLGLGAALSSVESGCQALSTSCQ NISEGLWGTLLNILLDQHESSMVRREAAFILQNLLVMPMPANVEEAKYSHWQHPCVPNEV SGVSLVGLPALQALLYHSQYFQHVALSASACYKGRYTFHLQKPVAGPASQLGTRDGASFV SDDSLLFWRSAAAAAQAANSSRPPSSLSTSSTSVRGSESETSGAASPTSFTADAPANRLM ARGQSNIDTRDSVALQDLQRRQSSSMQPVIMVTPDLLAAHCGLLTNLLAIMPDYTLMAIR QKRLLRVLAGLVAVEPIEKCLSEMKAPNVLPGEREDIKSQLVTLLHFLSGFSKLLQSCVS LSQDLISQWDFVKQLLSNLAAALTLSAEGLDADARDAVLSCWADVFTLMATLVKRDSFTV YPSVSAALGRHWRMFTGTLSVCVHEKFVDSHLHGAALHFLCTILAQETKRRGVVRPLSSD QGVTLVDVLGGPSAGQLCDVLLQSFERRCLHDPLKKLTAKALMALLASSVAAQNHAATAG IIDSCVDQMKQTHSQLNLESLRGDKTSHRKKEEGYLKELKLTVEILRSALYCNRECKELA RDTSLTAVLHALWPWLLLDNSIMEAVLELLCVYTADCPAACSSVCSGGLPGPKSTTSGSL MHSIMRLASGIAPDNSITQKLAFSLLANLVMSRDCRGVLQKNNFLQAFTSMVKPKVGGSR AAGVGSGSARLIGLWLRLLVNLSFSDDGQQSILRVTRALEVLVDLAPHRRAALLTLHNLC FCPANKPQVIANDKAITVLFCCLESKEMEMCCMGASALWALLHNNQRAKTTLKCPAVRLR IEEAHRMSKKDAENKEEPLRAYLLKCLESLSQLLNT NT seq 6591 nt NT seq  +upstreamnt  +downstreamnt atggaattatctgccattatcaagaaaataggccactctttggtcgagatacgagttcga gcgttgaagagcatcctgtgtaaactgaagcactccctgatttccatccctgacattgtt caagaaaagatgctctttgtgtacctcttggaatggttcaatctcccagaggtgcccatg caagaggaagttttggatttactcttgactttatccaagcatccaagtgcagcccagatg ctgagagatgtcgaggcggaggatttcctctcccaactgtctgctaacgtggaaccgaga cttcgagctgtcattgacgcaaccctggaccagctgtttcagcaacctcagctaatcccc tgtcgcaacgccgtcgacacgcatgaactcctcaatacacctccaacagtgcatgaggat gtgaaatgcttggaattttccgtgtttccgtggctgacattgacgaacgctgacagacac attctatcttccaaagaaagttctttaagaagcagcaaccccaatttggtgcggaccacg tgtgagctattatgtgacgtcatcatgcaggacttccctgctgagatcttcctgcagagg cccaatattgcaaagactcttctgtcccttctgaggccagggtcgggtaaaggtgagaca tgttacctccacttgcaggcgttctcctgcctgaggcagctttgcgtggggctaaggcag aggctgcgctttcatcgagatccgggcttccactctgccaagcaaggaggttctgcctat acagtgtccctgaactcctcctactcccaagcatcacaggttttttccccagcagcagag tgctctcctcggccgtctgtagtcgggggaacggctcagagagtccgaggtgatgggcaa gatggagacgtgggttcccccagtagcagctcaaacagaagtgcagtggcatcccagaca gccagacagacacctccagcagatgtgggccgcttggcgctgcccgaccaaggtctggaa gatgagccagagacggtgttggagcagctcacgttagctcagttcaccgttgccaccctg gagcatgtcataccgctgctgaagacagatgcttcacatgtgttctgttgtgttctggag ctgctgttcgacaccgtcctcctgctcggggacagcgtttccgaactggtctgggatgat ggcagcctgatggggatggagctgaaggagaagctgcaaacatgcatggacctactcgca gatgttctgagttaccatcaggactatagcggcagttctaaagttcaccacacagttaca tacacaggctcggcagtctttctcattaaattcctgcagaccatactcccacttgaaaaa gcgggcgggaatgttccggagaatgcggtaacagctatttttcatctgtgcctggacaag tcatttgggatggcgctccccatcatgcaagaaaccgcagcggcctacttggagcagtta aactcgggcagccatgagctctacgggagggtgacccgggccgctttgtggatggaatcc acttgcggcttcctcaagaaggtacaggccgagggagagaagaactggccggagctcctg gaaatggcggagcaggcgatagaaggccttccctttcatcaacacgtgcctgtcgtcaag gaatgcgttcaattctgttcctatttgtggaagtttgatcagtccagtccactcctccag acggagagtcagaagctgctccttaagttgctgtcgcatccattgcagcctatcaggata gaaacgtacacgtgcgtgttgagtgtcgtcaaggagtgcctcggcatccacaatacgtcc cgacaagaatcgggactctgcagcagagtcaacttcctcctccaccacaaggtgttgtat gaaataagcacctttggcctgcaggattctgcagagaaggtgaatgtcgccgccaaggat atcctgctattcctgctcaaaggacgattgatgatgacaacatcaacctgggacagattt atagcagcgctttcccgggtcatcgccatattacagggttatgccagcaccgaggagcca ctgggaagctgcatcctgctgctaagtgacacgtcgggaggagacggctttctgagcacg accaagttaaaagcagctctcagacttcttttcaccagacagcccacagtgagaatagca gcggttccgcacatcctggcccatctaaccggagcagacaatgcgaaaataagcaggccg cagctggaccgggtggtgacctcctcacttcccgatctctattgcatcctatacccgctg gatgtcacgcttgacaccagccacaagtctgtactgaaggtggaggcggtggagaagctc ttccacatgctgtcttccgacactctcgatgtggctctgagaagatctgcagccgagcag ctgtccgtggttctgcaggcgacaacaatgcatccggtcctgaagaagctcggaataact gacagagttatttctttcctcactgacagtgtcaacggtaataagagcttggactgcata ctggagccttgcatatctatcctgaggaaactggcgtacgctgatccagctttgcggaac agcctggcgcaacacaacctgctgctcatcactctgctccgagcatctctaatcatgaag gcaaacaaaaacaacgggggcgaggctgccgttctaatgagtttgctgctctttgatgaa ataagcagcatggcaatatggtcggacaaatcagccaccgatggccctctcccgacattc tctctcccggtgtcagtagttcgcagatacaagatgcctttccaggccgtgatccatcac ggcgtcagcccatatcgttgcgtcctgatgcccacctcagatcttctgcccttagcgcct gcctgtcaaaccttgcagttagcgtggaatgtcgcatggcactgcagcgtcgacaacctg cttgaggaattccacggcttgaccggcaacgctgaattccatggtgacctgaagctttca gaggcccaggtggcgtgtctgcgggcaacccacctcccccgcgcccttcaggactgcatt caggccgtggtcacggcggcgggacacaattcggtgatcgccgccctctccaggctcaac atctacttgttgatcgaaagaatggccgtcccttatgcggccagctacaggtgtagagaa acactacagtcgctcagctggcaggccgccgtcaccaggtttctccaggtgcgtccggcg tctgtggaagacgagaggctgctggcatacgttgttgcatttctgaacgcatacttcaaa gatgcgcgcgtgcgctgcaccgaccccgaggacaaggacctgcgctggatgttggagctg cttctcaatgaggaaagcgtttccctccttaatttgctgcctggtgcggagcctggcacc ccagatcaagactcagaagaaccagaggacgtgaagaactacgttagccagaaattacag cgagagctcaccggtctctttaaaaacgtgctcagccagctgacgtgcacgtcagacagg ctatgtttggcacgagccggtccgttcaagagccagctggcactcggcttgcttcagagc ttgcggctgtctgatgccccacactactatggcctccccaacctggagagaagtctgcag ggtatcgtcagcctgacagcccagtctggctggagtttgcactgccttgactttttgccc gccaccctctgcgccaagtttctcagcggcttgctcgaggtgatctcgtctttttacgtg aagtggggtggcaactccatgtcattcatgggcaaaggcgtgaccaagaatgccgtcgtc tgcttgcttcacttgtctcacgagatgatcgccgagagcgaggacaaggacatcatttcc atgtggtctttggggaatgagagcagcgccgaggaaccaaacgactctcaaatgggtttg gcctggctggttcctctctgggtggacagggatcaggaggtgagatttgccagtttgggt ttaggcgccgctctgtcgtcggtggagagcgggtgccaggctctgagcaccagctgccag aacatcagcgaaggcctgtggggcaccttgctcaacatcctccttgatcagcatgagagc agcatggtccgcagagaggctgcgtttatcctgcagaacctgctagtgatgcccatgcct gccaatgtagaagaagccaagtactcccactggcagcatccttgcgtccccaatgaggtg tctggtgtgtctttggtgggtcttcccgcgctccaggctctgctttaccactctcagtat ttccagcacgtcgcgctgtctgcctctgcctgttacaaaggcaggtacacttttcacctc caaaaacctgtcgctgggcccgccagtcaactcgggacacgggacggtgcttcatttgtt tcagacgattctctgctgttttggagaagtgccgcggcggcagcacaggctgccaactcc agcagacctcccagctccttgtccacgtccagtacctcggtaaggggttcagagtctgag acctccggtgctgcgtcccccaccagcttcacggcagatgctcctgctaacaggctaatg gcgcgaggccaaagtaacatcgacacaagggactctgtcgctttgcaagacctccaacgg cgccagtcctcgtctatgcagccggtcatcatggttacccctgacctcctggcggcccac tgtggactgctgacaaatttactggccatcatgccagattataccctgatggcgattcga cagaagcggctcctgcgcgtattggcgggcttggtggctgtggagccaattgagaaatgt ctgagtgaaatgaaggcacccaacgttcttcctggagagagagaagacatcaagagtcag cttgttacgcttcttcacttcctgtctggcttttccaagctgctgcaatcgtgcgtctcg ctcagccaagacttgatcagccagtgggactttgtgaaacaattgttgtccaacctcgca gcagcgctcaccctcagtgcggaaggattagatgcggacgcgcgggacgccgtcctgtcg tgctgggcggatgtgtttacgctcatggctactctggtgaagagggacagttttaccgtg tatccatctgtttcagccgcgttggggagacactggcggatgttcacaggaacgctctca gtgtgtgtgcacgagaagtttgtggactctcacctgcacggagcagctttgcattttctt tgcacgattttggcgcaggagactaaaaggcgaggagtcgtcaggcctttgagttcagac caaggcgtcactttggttgacgtgcttggcggtccgtcagcgggccagctttgtgatgtg ctgctgcagagctttgaaaggaggtgccttcatgatccacttaaaaaattgacggccaaa gctctgatggctctactggccagcagcgttgctgcccagaaccacgctgctacagctgga ataattgacagctgcgtggatcagatgaaacagactcactctcagctcaatctggagtca ctccgaggcgacaagacttcccaccgcaaaaaggaagaaggctacttgaaggagcttaag ctgactgtggagatcctgcggagtgctctctactgcaaccgggaatgcaaagagttagcc agagatacaagcctcacagcagtgttgcatgccctttggccttggctcctattggacaac tccatcatggaggcggtgctggagctcctctgtgtttacacggccgactgccccgcagca tgcagttctgtgtgtagcggggggctgccaggaccaaaaagcacaacgagtggctcgcta atgcactccatcatgaggttggcctcgggcatcgcccccgacaacagcattacccagaag cttgccttttccttgctggctaacttggttatgtcccgtgactgccgtggcgtcttgcaa aagaacaacttcctgcaagccttcacctcaatggtgaagcccaaggttggcggctccagg gccgctggcgtcggtagcggctcggctcgcctgattggtctgtggctcaggcttctggtc aacctgtccttctcagacgacggccaacagagtatcctcagggtgactcgagcgctggaa gtgctggtggatttggcgccgcatcggcgcgctgcgttgctcacccttcacaacctttgc ttttgtcccgccaacaagcctcaggttatcgccaacgacaaagctataacagtcctcttc tgctgtctggaaagtaaagagatggagatgtgctgcatgggagcgtctgcgctttgggca ttgcttcataataaccaacgggccaagactaccctgaagtgccctgcggttcgattgagg atcgaggaagcccaccgcatgtccaagaaagatgctgagaacaaagaggagcctttacgt gcctacttgttgaagtgcctcgaaagtctctcccagctgctgaacacatga

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