Syngnathus scovelli (Gulf pipefish): 125985727
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Entry
125985727 CDS
T08785
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125985727 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125985727 (nup58)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125985727 (nup58)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Siah-Interact_N
PSY3
Nup49_C
Motif
Other DBs
NCBI-GeneID:
125985727
NCBI-ProteinID:
XP_049604722
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All DBs
Position
18:10992139..11001275
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AA seq
594 aa
AA seq
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MSGFNFGTGTLGSTNTGGGVSFGAATSAPPASTGGFSFGNALGATQATTTTSTPSLVLGG
SLFGQKPTGGFSFNTPAAGAAPTAGLTLGAAATTTASTGFSLAFNKPTGSAAPFSLTAAT
TSATSVPAATGLSFGSVLTSTAPQQPGVTGFGLGLGSTTSTAAVATVPSLGASLFSSTLA
TGLGQTALGGGGLTLGSLLGTSTAATAAPAPSIGLGGDDFSSSSEKSDASSGANAQDSKA
LKHENLPPVICQDVENFQKFVKEQKQVQEDISRMSSKAISKVQDDIKTLRQLLSVSASGL
QRQALAIDKLKLETAQELKNADIALHTQKTPPGLQHENTAPSDYFRCLVEQFEVQLQQYR
QQIEELENHLTTQSSGFHITPQDLTMAMQKLYQTFVAQAAQLQSVHENVKILKHQYLTYR
RAFLEDSTDVFESKRASNRKWQSTPRVTTGPPPFSSVPNAAAVAMAATLTQQQQPTTGNQ
APLGGGFGNPFATAVGTSLGSTTLGGFGAGPGFGGVGTGGSSFAFATTTKPTGGSLSAGF
GGTNTSGFNFSNPGINPSAGLTFGVSNPPAAGFGTGAPLLQLKKPPAGNKRGKR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtctggatttaactttgggacgggaacactcggttccaccaacactggagggggggtt
tcattcggagcagcaaccagtgcacctccggctagtactggtggcttctcgtttggtaat
gcattgggtgctacccaagccactaccaccaccagcaccccatcacttgttctaggagga
agtctctttggtcagaaacctactggagggttttcatttaacacgcctgctgcaggtgct
gctcccactgctggactaacattaggggctgcagctactacaacggcctcaactggcttc
agcctagccttcaacaaacccactggctcagctgcgccgttctccctcactgctgctacc
acaagcgccacgtctgtccccgctgccacgggtttatcatttggctctgtcttgacatca
acggcaccacagcagcccggggtgacgggctttgggctcggcctcggcagcacgacaagc
acagctgctgtcgcgacagttccttcgctgggtgccagtctcttttccagcacgctggct
acaggtttgggtcagaccgctcttggaggagggggcttaacattaggttctttattaggc
acttcaacagcagccacggcagcccctgctcccagtattggcttgggcggggatgacttc
agttcctcctctgagaagagtgacgcctcatctggagccaatgcccaggacagtaaagct
ttaaagcatgagaacctgcctccggtcatttgtcaagatgttgagaatttccagaagttt
gtcaaagaacagaaacaggtccaggaggacatcagcaggatgtcgtctaaggcaatatcc
aaagtccaggatgacatcaagaccctcaggcaacttctctctgtcagtgccagtgggctg
cagcgccaagctcttgcaattgacaagctaaagctggagactgcacaggagctgaaaaat
gcggacattgcacttcatacacaaaagacgcctcctggacttcagcatgaaaacacagct
ccttcagattatttccgttgcctggtggagcagtttgaggtgcaactgcagcaatacaga
cagcagattgaagagctggaaaatcacctgaccacacagagtagtggttttcacatcacc
cctcaggacctgaccatggccatgcagaagttgtatcagacatttgttgcccaggccgcc
cagcttcagtctgtacatgagaacgtaaagatcttaaagcaccagtacctcacctaccgc
cgggcctttttagaggactcaactgacgtctttgagtccaagcgggcgtccaacaggaag
tggcagagcacgccacgcgttaccaccggtccgcccccattctcaagtgtgccaaatgct
gcagcggtggccatggcagccacactgacccagcaacagcagccaactacagggaaccag
gcacctttgggaggagggtttggcaacccctttgccacagcagtgggcactagtttgggc
tcgaccactttgggaggttttggtgcagggccaggatttggtggggtggggacagggggt
tcttcttttgccttcgccaccaccactaagcccacaggaggcagtctgagtgcaggtttt
ggtggtaccaacacctcgggctttaatttcagcaaccctggcatcaacccctcggctgga
ctgacctttggggtgtccaacccgcccgctgccggcttcggtaccggggcgcctctgcta
caactcaagaagccccccgctggtaataaacggggcaaaagatag
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